KEGG   Phoenix dactylifera (date palm): 8890543
Entry
8890543           CDS       T03274                                 
Symbol
rpoA, PhdaC_p054
Name
(RefSeq) DNA-directed RNA polymerase alpha chain
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
pda  Phoenix dactylifera (date palm)
Pathway
pda03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:pda00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    8890543 (rpoA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pda03021]
    8890543 (rpoA)
   03400 DNA repair and recombination proteins [BR:pda03400]
    8890543 (rpoA)
Enzymes [BR:pda01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     8890543 (rpoA)
Transcription machinery [BR:pda03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     8890543 (rpoA)
DNA repair and recombination proteins [BR:pda03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      8890543 (rpoA)
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_L RNA_pol_A_CTD
Other DBs
NCBI-GeneID: 8890543
NCBI-ProteinID: YP_003540963
UniProt: D4PBE3
Position
Pltd:complement(80044..81057)
AA seq 337 aa
MVREEVVGSTRTLRWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
CITRAKSEKVAHEYSTIVGIEESVHEILLNLKEIILRSNLYGVIDASICVRGPRYVTAKD
IISPPYVEIVDTTQHIANLTEPIDLCIELQIKRDRGYRMKSANNSQDGSYPIDAVSMPVR
NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEDINFE
ENKNRFPLPLFTFQDRLTNLKKNKKGIPLKCIFIDQSELPSRTYNCLKGSNIHTLSDLLN
NSQEDLMRIEFFRIEDVKQILDTLQKYFAIDLSKNKF
NT seq 1014 nt   +upstreamnt  +downstreamnt
atggttcgagaggaagtagtaggatccactcgaacactacggtggaaatgtgttgaatca
agagtagacagtaagcgtctttattatggtcgtttcattctgtccccgcttatgaaaggt
caagccgataccataggtattgccatgcgaagggctttacttggagaaatagaaggaaca
tgtatcacacgtgcaaaatctgagaaagtagcacatgaatattctacgatagtaggtatt
gaggaatcagtacatgaaattttactaaatttgaaagaaattatattgagaagtaatctg
tatggagttatagacgcatccatctgcgtcagggggcctagatacgtaaccgctaaagat
attatctcaccaccttacgtggaaatagttgacacgacacaacatatagctaacctgacg
gaaccaattgatttgtgtattgaattacaaatcaagagagatcgcggatatcgtatgaaa
tccgcaaataactctcaagatggaagttatcctatagatgctgtatccatgcctgttcga
aatgcgaatcatagtattcactcttatgggaatgggaatgaaaaacaagagatacttttt
ctagaaatatggacgaatggaagtttaactcctaaggaagcactttatgaagcttctcgt
aatttgattgatttatttattccttttctacatgcggaggaagaggacattaatttcgaa
gaaaataaaaacaggtttcctctacccctttttacctttcaagatagattaactaatcta
aagaaaaacaaaaaaggaattccattgaaatgtatttttattgaccaatcagaattgcct
tccaggacctataactgtctcaaagggtccaatatacatacattatcggaccttttgaat
aacagtcaagaagatcttatgagaattgaattttttcgaatagaagatgtaaaacagata
ttggacactctgcagaagtatttcgcaattgatttatctaagaataagttttaa

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