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Database: PDB
Entry: 2D1Y
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Original site: 2D1Y 
HEADER    OXIDOREDUCTASE                          02-SEP-05   2D1Y              
TITLE     CRYSTAL STRUCTURE OF TT0321 FROM THERMUS THERMOPHILUS HB8             
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: HYPOTHETICAL PROTEIN TT0321;                               
COMPND   3 CHAIN: A, B, C, D;                                                   
COMPND   4 ENGINEERED: YES                                                      
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: THERMUS THERMOPHILUS;                           
SOURCE   3 ORGANISM_TAXID: 274;                                                 
SOURCE   4 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3);                       
SOURCE   5 EXPRESSION_SYSTEM_TAXID: 469008;                                     
SOURCE   6 EXPRESSION_SYSTEM_STRAIN: BL21(DE3);                                 
SOURCE   7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID;                              
SOURCE   8 EXPRESSION_SYSTEM_PLASMID: PET11A                                    
KEYWDS    STRUCRTURAL GENOMICS, THERMUS THERMOPHILUS HB8, STRUCTURAL GENOMICS,  
KEYWDS   2 NPPSFA, NATIONAL PROJECT ON PROTEIN STRUCTURAL AND FUNCTIONAL        
KEYWDS   3 ANALYSES, RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE, RSGI,     
KEYWDS   4 OXIDOREDUCTASE                                                       
EXPDTA    X-RAY DIFFRACTION                                                     
AUTHOR    Y.ASADA,N.KUNISHIMA,RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE   
AUTHOR   2 (RSGI)                                                               
REVDAT   4   25-OCT-23 2D1Y    1       REMARK                                   
REVDAT   3   03-NOV-21 2D1Y    1       JRNL   REMARK                            
REVDAT   2   24-FEB-09 2D1Y    1       VERSN                                    
REVDAT   1   02-MAR-06 2D1Y    0                                                
JRNL        AUTH   Y.ASADA,S.ENDO,Y.INOUE,H.MAMIYA,A.HARA,N.KUNISHIMA,          
JRNL        AUTH 2 T.MATSUNAGA                                                  
JRNL        TITL   BIOCHEMICAL AND STRUCTURAL CHARACTERIZATION OF A SHORT-CHAIN 
JRNL        TITL 2 DEHYDROGENASE/REDUCTASE OF THERMUS THERMOPHILUS HB8: A       
JRNL        TITL 3 HYPERTHERMOSTABLE ALDOSE-1-DEHYDROGENASE WITH BROAD          
JRNL        TITL 4 SUBSTRATE SPECIFICITY.                                       
JRNL        REF    CHEM.BIOL.INTERACT.           V. 178   117 2009              
JRNL        REFN                   ISSN 0009-2797                               
JRNL        PMID   18926808                                                     
JRNL        DOI    10.1016/J.CBI.2008.09.018                                    
REMARK   2                                                                      
REMARK   2 RESOLUTION.    1.65 ANGSTROMS.                                       
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : CNS 1.1                                              
REMARK   3   AUTHORS     : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE-              
REMARK   3               : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU,              
REMARK   3               : READ,RICE,SIMONSON,WARREN                            
REMARK   3                                                                      
REMARK   3  REFINEMENT TARGET : ENGH & HUBER                                    
REMARK   3                                                                      
REMARK   3  DATA USED IN REFINEMENT.                                            
REMARK   3   RESOLUTION RANGE HIGH (ANGSTROMS) : 1.65                           
REMARK   3   RESOLUTION RANGE LOW  (ANGSTROMS) : 28.93                          
REMARK   3   DATA CUTOFF            (SIGMA(F)) : 0.000                          
REMARK   3   DATA CUTOFF HIGH         (ABS(F)) : NULL                           
REMARK   3   DATA CUTOFF LOW          (ABS(F)) : NULL                           
REMARK   3   COMPLETENESS (WORKING+TEST)   (%) : 99.7                           
REMARK   3   NUMBER OF REFLECTIONS             : 108767                         
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT.                                     
REMARK   3   CROSS-VALIDATION METHOD          : THROUGHOUT                      
REMARK   3   FREE R VALUE TEST SET SELECTION  : RAMDOM                          
REMARK   3   R VALUE            (WORKING SET) : 0.175                           
REMARK   3   FREE R VALUE                     : 0.194                           
REMARK   3   FREE R VALUE TEST SET SIZE   (%) : NULL                            
REMARK   3   FREE R VALUE TEST SET COUNT      : 5439                            
REMARK   3   ESTIMATED ERROR OF FREE R VALUE  : NULL                            
REMARK   3                                                                      
REMARK   3  FIT IN THE HIGHEST RESOLUTION BIN.                                  
REMARK   3   TOTAL NUMBER OF BINS USED           : NULL                         
REMARK   3   BIN RESOLUTION RANGE HIGH       (A) : 1.65                         
REMARK   3   BIN RESOLUTION RANGE LOW        (A) : 1.73                         
REMARK   3   BIN COMPLETENESS (WORKING+TEST) (%) : 98.80                        
REMARK   3   REFLECTIONS IN BIN    (WORKING SET) : NULL                         
REMARK   3   BIN R VALUE           (WORKING SET) : 0.2210                       
REMARK   3   BIN FREE R VALUE                    : 0.2310                       
REMARK   3   BIN FREE R VALUE TEST SET SIZE  (%) : NULL                         
REMARK   3   BIN FREE R VALUE TEST SET COUNT     : 665                          
REMARK   3   ESTIMATED ERROR OF BIN FREE R VALUE : 0.009                        
REMARK   3                                                                      
REMARK   3  NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.                    
REMARK   3   PROTEIN ATOMS            : 7183                                    
REMARK   3   NUCLEIC ACID ATOMS       : 0                                       
REMARK   3   HETEROGEN ATOMS          : 176                                     
REMARK   3   SOLVENT ATOMS            : 827                                     
REMARK   3                                                                      
REMARK   3  B VALUES.                                                           
REMARK   3   FROM WILSON PLOT           (A**2) : 16.76                          
REMARK   3   MEAN B VALUE      (OVERALL, A**2) : 21.70                          
REMARK   3   OVERALL ANISOTROPIC B VALUE.                                       
REMARK   3    B11 (A**2) : -6.37000                                             
REMARK   3    B22 (A**2) : 6.99000                                              
REMARK   3    B33 (A**2) : -0.62000                                             
REMARK   3    B12 (A**2) : 0.00000                                              
REMARK   3    B13 (A**2) : -0.67000                                             
REMARK   3    B23 (A**2) : 0.00000                                              
REMARK   3                                                                      
REMARK   3  ESTIMATED COORDINATE ERROR.                                         
REMARK   3   ESD FROM LUZZATI PLOT        (A) : 0.16                            
REMARK   3   ESD FROM SIGMAA              (A) : 0.13                            
REMARK   3   LOW RESOLUTION CUTOFF        (A) : 5.00                            
REMARK   3                                                                      
REMARK   3  CROSS-VALIDATED ESTIMATED COORDINATE ERROR.                         
REMARK   3   ESD FROM C-V LUZZATI PLOT    (A) : 0.18                            
REMARK   3   ESD FROM C-V SIGMAA          (A) : 0.15                            
REMARK   3                                                                      
REMARK   3  RMS DEVIATIONS FROM IDEAL VALUES.                                   
REMARK   3   BOND LENGTHS                 (A) : 0.005                           
REMARK   3   BOND ANGLES            (DEGREES) : 1.200                           
REMARK   3   DIHEDRAL ANGLES        (DEGREES) : 21.10                           
REMARK   3   IMPROPER ANGLES        (DEGREES) : 0.830                           
REMARK   3                                                                      
REMARK   3  ISOTROPIC THERMAL MODEL : RESTRAINED                                
REMARK   3                                                                      
REMARK   3  ISOTROPIC THERMAL FACTOR RESTRAINTS.    RMS    SIGMA                
REMARK   3   MAIN-CHAIN BOND              (A**2) : NULL  ; NULL                 
REMARK   3   MAIN-CHAIN ANGLE             (A**2) : NULL  ; NULL                 
REMARK   3   SIDE-CHAIN BOND              (A**2) : NULL  ; NULL                 
REMARK   3   SIDE-CHAIN ANGLE             (A**2) : NULL  ; NULL                 
REMARK   3                                                                      
REMARK   3  BULK SOLVENT MODELING.                                              
REMARK   3   METHOD USED : NULL                                                 
REMARK   3   KSOL        : NULL                                                 
REMARK   3   BSOL        : NULL                                                 
REMARK   3                                                                      
REMARK   3  NCS MODEL : NULL                                                    
REMARK   3                                                                      
REMARK   3  NCS RESTRAINTS.                         RMS   SIGMA/WEIGHT          
REMARK   3   GROUP  1  POSITIONAL            (A) : NULL  ; NULL                 
REMARK   3   GROUP  1  B-FACTOR           (A**2) : NULL  ; NULL                 
REMARK   3                                                                      
REMARK   3  PARAMETER FILE  1  : NULL                                           
REMARK   3  TOPOLOGY FILE  1   : NULL                                           
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: NULL                                      
REMARK   4                                                                      
REMARK   4 2D1Y COMPLIES WITH FORMAT V. 3.30, 13-JUL-11                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 05-SEP-05.                  
REMARK 100 THE DEPOSITION ID IS D_1000024887.                                   
REMARK 200                                                                      
REMARK 200 EXPERIMENTAL DETAILS                                                 
REMARK 200  EXPERIMENT TYPE                : X-RAY DIFFRACTION                  
REMARK 200  DATE OF DATA COLLECTION        : 07-FEB-05                          
REMARK 200  TEMPERATURE           (KELVIN) : 100                                
REMARK 200  PH                             : 8.5                                
REMARK 200  NUMBER OF CRYSTALS USED        : 1                                  
REMARK 200                                                                      
REMARK 200  SYNCHROTRON              (Y/N) : Y                                  
REMARK 200  RADIATION SOURCE               : SPRING-8                           
REMARK 200  BEAMLINE                       : BL26B1                             
REMARK 200  X-RAY GENERATOR MODEL          : NULL                               
REMARK 200  MONOCHROMATIC OR LAUE    (M/L) : M                                  
REMARK 200  WAVELENGTH OR RANGE        (A) : 1.0                                
REMARK 200  MONOCHROMATOR                  : BENDING MAGNET                     
REMARK 200  OPTICS                         : MIRRORS                            
REMARK 200                                                                      
REMARK 200  DETECTOR TYPE                  : IMAGE PLATE                        
REMARK 200  DETECTOR MANUFACTURER          : RIGAKU RAXIS V                     
REMARK 200  INTENSITY-INTEGRATION SOFTWARE : HKL-2000                           
REMARK 200  DATA SCALING SOFTWARE          : SCALEPACK                          
REMARK 200                                                                      
REMARK 200  NUMBER OF UNIQUE REFLECTIONS   : 108794                             
REMARK 200  RESOLUTION RANGE HIGH      (A) : 1.650                              
REMARK 200  RESOLUTION RANGE LOW       (A) : 30.000                             
REMARK 200  REJECTION CRITERIA  (SIGMA(I)) : 0.000                              
REMARK 200                                                                      
REMARK 200 OVERALL.                                                             
REMARK 200  COMPLETENESS FOR RANGE     (%) : 100.0                              
REMARK 200  DATA REDUNDANCY                : 3.500                              
REMARK 200  R MERGE                    (I) : 0.06400                            
REMARK 200  R SYM                      (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR THE DATA SET  : 12.7000                            
REMARK 200                                                                      
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.                                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.65                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE LOW  (A) : 1.71                     
REMARK 200  COMPLETENESS FOR SHELL     (%) : 100.0                              
REMARK 200  DATA REDUNDANCY IN SHELL       : 3.50                               
REMARK 200  R MERGE FOR SHELL          (I) : 0.30800                            
REMARK 200  R SYM FOR SHELL            (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR SHELL         : 4.290                              
REMARK 200                                                                      
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH                              
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT        
REMARK 200 SOFTWARE USED: MOLREP                                                
REMARK 200 STARTING MODEL: 1IPE.PDB                                             
REMARK 200                                                                      
REMARK 200 REMARK: NULL                                                         
REMARK 280                                                                      
REMARK 280 CRYSTAL                                                              
REMARK 280 SOLVENT CONTENT, VS   (%): 38.12                                     
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.00                     
REMARK 280                                                                      
REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M MAGNESIUM CHLORIDE HEXAHYDRATE,     
REMARK 280  0.1M TRIS-HCL, 30% W/V PEG 4000, PH 8.5, MICROBATCH, TEMPERATURE    
REMARK 280  291K                                                                
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY                                            
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1                         
REMARK 290                                                                      
REMARK 290      SYMOP   SYMMETRY                                                
REMARK 290     NNNMMM   OPERATOR                                                
REMARK 290       1555   X,Y,Z                                                   
REMARK 290       2555   -X,Y+1/2,-Z                                             
REMARK 290                                                                      
REMARK 290     WHERE NNN -> OPERATOR NUMBER                                     
REMARK 290           MMM -> TRANSLATION VECTOR                                  
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS                            
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM             
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY                
REMARK 290 RELATED MOLECULES.                                                   
REMARK 290   SMTRY1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   2 -1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   2  0.000000  1.000000  0.000000       47.66700            
REMARK 290   SMTRY3   2  0.000000  0.000000 -1.000000        0.00000            
REMARK 290                                                                      
REMARK 290 REMARK: NULL                                                         
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1                                                       
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 300 REMARK: THE BIOLOGICAL ASSEMBLY IS TETRAMER                          
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC                        
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC                 
REMARK 350 SOFTWARE USED: PISA                                                  
REMARK 350 TOTAL BURIED SURFACE AREA: 17810 ANGSTROM**2                         
REMARK 350 SURFACE AREA OF THE COMPLEX: 32620 ANGSTROM**2                       
REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -132.0 KCAL/MOL                       
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D                            
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 465                                                                      
REMARK 465 MISSING RESIDUES                                                     
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE                       
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)                
REMARK 465                                                                      
REMARK 465   M RES C SSSEQI                                                     
REMARK 465     MET A     1                                                      
REMARK 465     LEU A   193                                                      
REMARK 465     SER A   194                                                      
REMARK 465     PRO A   195                                                      
REMARK 465     ASP A   196                                                      
REMARK 465     PRO A   197                                                      
REMARK 465     GLU A   198                                                      
REMARK 465     ARG A   199                                                      
REMARK 465     THR A   200                                                      
REMARK 465     MET A   250                                                      
REMARK 465     MET A   251                                                      
REMARK 465     ALA A   252                                                      
REMARK 465     GLY A   253                                                      
REMARK 465     ARG A   254                                                      
REMARK 465     PRO A   255                                                      
REMARK 465     VAL A   256                                                      
REMARK 465     MET B     1                                                      
REMARK 465     ALA B   192                                                      
REMARK 465     LEU B   193                                                      
REMARK 465     SER B   194                                                      
REMARK 465     PRO B   195                                                      
REMARK 465     ASP B   196                                                      
REMARK 465     PRO B   197                                                      
REMARK 465     GLU B   198                                                      
REMARK 465     MET B   251                                                      
REMARK 465     ALA B   252                                                      
REMARK 465     GLY B   253                                                      
REMARK 465     ARG B   254                                                      
REMARK 465     PRO B   255                                                      
REMARK 465     VAL B   256                                                      
REMARK 465     MET C     1                                                      
REMARK 465     MET C   250                                                      
REMARK 465     MET C   251                                                      
REMARK 465     ALA C   252                                                      
REMARK 465     GLY C   253                                                      
REMARK 465     ARG C   254                                                      
REMARK 465     PRO C   255                                                      
REMARK 465     VAL C   256                                                      
REMARK 465     MET D     1                                                      
REMARK 465     GLY D     2                                                      
REMARK 465     LEU D   193                                                      
REMARK 465     SER D   194                                                      
REMARK 465     PRO D   195                                                      
REMARK 465     ASP D   196                                                      
REMARK 465     PRO D   197                                                      
REMARK 465     GLU D   198                                                      
REMARK 465     ARG D   199                                                      
REMARK 465     MET D   250                                                      
REMARK 465     MET D   251                                                      
REMARK 465     ALA D   252                                                      
REMARK 465     GLY D   253                                                      
REMARK 465     ARG D   254                                                      
REMARK 465     PRO D   255                                                      
REMARK 465     VAL D   256                                                      
REMARK 480                                                                      
REMARK 480 ZERO OCCUPANCY ATOM                                                  
REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO                  
REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS                
REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME;              
REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE):         
REMARK 480   M RES C SSEQI ATOMS                                                
REMARK 480     GLU A  185   CG   CD   OE1  OE2                                  
REMARK 480     ARG B  124   CD   NE   CZ   NH1  NH2                             
REMARK 480     GLU B  229   CD   OE1  OE2                                       
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500    ALA A 135     -132.41    -90.36                                   
REMARK 500    ASN A 146       40.11   -148.69                                   
REMARK 500    LEU B 109      -51.75   -124.24                                   
REMARK 500    ALA B 135     -130.43    -91.80                                   
REMARK 500    ASN B 146       39.17   -148.77                                   
REMARK 500    ASP B 206        4.33    -69.77                                   
REMARK 500    ALA C 135     -131.13    -93.23                                   
REMARK 500    ASN C 146       41.38   -148.74                                   
REMARK 500    ALA D 135     -131.95    -91.96                                   
REMARK 500    ASN D 146       39.61   -148.89                                   
REMARK 500    LEU D 188       36.86    -79.53                                   
REMARK 500    GLU D 189      -47.46   -143.66                                   
REMARK 500    ARG D 201      -73.40    -52.46                                   
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 800                                                                      
REMARK 800 SITE                                                                 
REMARK 800 SITE_IDENTIFIER: AC1                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAD A 1001                
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC2                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAD B 1002                
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC3                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAD C 1003                
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC4                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAD D 1004                
REMARK 900                                                                      
REMARK 900 RELATED ENTRIES                                                      
REMARK 900 RELATED ID: TTK003000321.1   RELATED DB: TARGETDB                    
DBREF  2D1Y A    1   256  UNP    Q5SLC4   Q5SLC4_THET8     1    256             
DBREF  2D1Y B    1   256  UNP    Q5SLC4   Q5SLC4_THET8     1    256             
DBREF  2D1Y C    1   256  UNP    Q5SLC4   Q5SLC4_THET8     1    256             
DBREF  2D1Y D    1   256  UNP    Q5SLC4   Q5SLC4_THET8     1    256             
SEQRES   1 A  256  MET GLY LEU PHE ALA GLY LYS GLY VAL LEU VAL THR GLY          
SEQRES   2 A  256  GLY ALA ARG GLY ILE GLY ARG ALA ILE ALA GLN ALA PHE          
SEQRES   3 A  256  ALA ARG GLU GLY ALA LEU VAL ALA LEU CYS ASP LEU ARG          
SEQRES   4 A  256  PRO GLU GLY LYS GLU VAL ALA GLU ALA ILE GLY GLY ALA          
SEQRES   5 A  256  PHE PHE GLN VAL ASP LEU GLU ASP GLU ARG GLU ARG VAL          
SEQRES   6 A  256  ARG PHE VAL GLU GLU ALA ALA TYR ALA LEU GLY ARG VAL          
SEQRES   7 A  256  ASP VAL LEU VAL ASN ASN ALA ALA ILE ALA ALA PRO GLY          
SEQRES   8 A  256  SER ALA LEU THR VAL ARG LEU PRO GLU TRP ARG ARG VAL          
SEQRES   9 A  256  LEU GLU VAL ASN LEU THR ALA PRO MET HIS LEU SER ALA          
SEQRES  10 A  256  LEU ALA ALA ARG GLU MET ARG LYS VAL GLY GLY GLY ALA          
SEQRES  11 A  256  ILE VAL ASN VAL ALA SER VAL GLN GLY LEU PHE ALA GLU          
SEQRES  12 A  256  GLN GLU ASN ALA ALA TYR ASN ALA SER LYS GLY GLY LEU          
SEQRES  13 A  256  VAL ASN LEU THR ARG SER LEU ALA LEU ASP LEU ALA PRO          
SEQRES  14 A  256  LEU ARG ILE ARG VAL ASN ALA VAL ALA PRO GLY ALA ILE          
SEQRES  15 A  256  ALA THR GLU ALA VAL LEU GLU ALA ILE ALA LEU SER PRO          
SEQRES  16 A  256  ASP PRO GLU ARG THR ARG ARG ASP TRP GLU ASP LEU HIS          
SEQRES  17 A  256  ALA LEU ARG ARG LEU GLY LYS PRO GLU GLU VAL ALA GLU          
SEQRES  18 A  256  ALA VAL LEU PHE LEU ALA SER GLU LYS ALA SER PHE ILE          
SEQRES  19 A  256  THR GLY ALA ILE LEU PRO VAL ASP GLY GLY MET THR ALA          
SEQRES  20 A  256  SER PHE MET MET ALA GLY ARG PRO VAL                          
SEQRES   1 B  256  MET GLY LEU PHE ALA GLY LYS GLY VAL LEU VAL THR GLY          
SEQRES   2 B  256  GLY ALA ARG GLY ILE GLY ARG ALA ILE ALA GLN ALA PHE          
SEQRES   3 B  256  ALA ARG GLU GLY ALA LEU VAL ALA LEU CYS ASP LEU ARG          
SEQRES   4 B  256  PRO GLU GLY LYS GLU VAL ALA GLU ALA ILE GLY GLY ALA          
SEQRES   5 B  256  PHE PHE GLN VAL ASP LEU GLU ASP GLU ARG GLU ARG VAL          
SEQRES   6 B  256  ARG PHE VAL GLU GLU ALA ALA TYR ALA LEU GLY ARG VAL          
SEQRES   7 B  256  ASP VAL LEU VAL ASN ASN ALA ALA ILE ALA ALA PRO GLY          
SEQRES   8 B  256  SER ALA LEU THR VAL ARG LEU PRO GLU TRP ARG ARG VAL          
SEQRES   9 B  256  LEU GLU VAL ASN LEU THR ALA PRO MET HIS LEU SER ALA          
SEQRES  10 B  256  LEU ALA ALA ARG GLU MET ARG LYS VAL GLY GLY GLY ALA          
SEQRES  11 B  256  ILE VAL ASN VAL ALA SER VAL GLN GLY LEU PHE ALA GLU          
SEQRES  12 B  256  GLN GLU ASN ALA ALA TYR ASN ALA SER LYS GLY GLY LEU          
SEQRES  13 B  256  VAL ASN LEU THR ARG SER LEU ALA LEU ASP LEU ALA PRO          
SEQRES  14 B  256  LEU ARG ILE ARG VAL ASN ALA VAL ALA PRO GLY ALA ILE          
SEQRES  15 B  256  ALA THR GLU ALA VAL LEU GLU ALA ILE ALA LEU SER PRO          
SEQRES  16 B  256  ASP PRO GLU ARG THR ARG ARG ASP TRP GLU ASP LEU HIS          
SEQRES  17 B  256  ALA LEU ARG ARG LEU GLY LYS PRO GLU GLU VAL ALA GLU          
SEQRES  18 B  256  ALA VAL LEU PHE LEU ALA SER GLU LYS ALA SER PHE ILE          
SEQRES  19 B  256  THR GLY ALA ILE LEU PRO VAL ASP GLY GLY MET THR ALA          
SEQRES  20 B  256  SER PHE MET MET ALA GLY ARG PRO VAL                          
SEQRES   1 C  256  MET GLY LEU PHE ALA GLY LYS GLY VAL LEU VAL THR GLY          
SEQRES   2 C  256  GLY ALA ARG GLY ILE GLY ARG ALA ILE ALA GLN ALA PHE          
SEQRES   3 C  256  ALA ARG GLU GLY ALA LEU VAL ALA LEU CYS ASP LEU ARG          
SEQRES   4 C  256  PRO GLU GLY LYS GLU VAL ALA GLU ALA ILE GLY GLY ALA          
SEQRES   5 C  256  PHE PHE GLN VAL ASP LEU GLU ASP GLU ARG GLU ARG VAL          
SEQRES   6 C  256  ARG PHE VAL GLU GLU ALA ALA TYR ALA LEU GLY ARG VAL          
SEQRES   7 C  256  ASP VAL LEU VAL ASN ASN ALA ALA ILE ALA ALA PRO GLY          
SEQRES   8 C  256  SER ALA LEU THR VAL ARG LEU PRO GLU TRP ARG ARG VAL          
SEQRES   9 C  256  LEU GLU VAL ASN LEU THR ALA PRO MET HIS LEU SER ALA          
SEQRES  10 C  256  LEU ALA ALA ARG GLU MET ARG LYS VAL GLY GLY GLY ALA          
SEQRES  11 C  256  ILE VAL ASN VAL ALA SER VAL GLN GLY LEU PHE ALA GLU          
SEQRES  12 C  256  GLN GLU ASN ALA ALA TYR ASN ALA SER LYS GLY GLY LEU          
SEQRES  13 C  256  VAL ASN LEU THR ARG SER LEU ALA LEU ASP LEU ALA PRO          
SEQRES  14 C  256  LEU ARG ILE ARG VAL ASN ALA VAL ALA PRO GLY ALA ILE          
SEQRES  15 C  256  ALA THR GLU ALA VAL LEU GLU ALA ILE ALA LEU SER PRO          
SEQRES  16 C  256  ASP PRO GLU ARG THR ARG ARG ASP TRP GLU ASP LEU HIS          
SEQRES  17 C  256  ALA LEU ARG ARG LEU GLY LYS PRO GLU GLU VAL ALA GLU          
SEQRES  18 C  256  ALA VAL LEU PHE LEU ALA SER GLU LYS ALA SER PHE ILE          
SEQRES  19 C  256  THR GLY ALA ILE LEU PRO VAL ASP GLY GLY MET THR ALA          
SEQRES  20 C  256  SER PHE MET MET ALA GLY ARG PRO VAL                          
SEQRES   1 D  256  MET GLY LEU PHE ALA GLY LYS GLY VAL LEU VAL THR GLY          
SEQRES   2 D  256  GLY ALA ARG GLY ILE GLY ARG ALA ILE ALA GLN ALA PHE          
SEQRES   3 D  256  ALA ARG GLU GLY ALA LEU VAL ALA LEU CYS ASP LEU ARG          
SEQRES   4 D  256  PRO GLU GLY LYS GLU VAL ALA GLU ALA ILE GLY GLY ALA          
SEQRES   5 D  256  PHE PHE GLN VAL ASP LEU GLU ASP GLU ARG GLU ARG VAL          
SEQRES   6 D  256  ARG PHE VAL GLU GLU ALA ALA TYR ALA LEU GLY ARG VAL          
SEQRES   7 D  256  ASP VAL LEU VAL ASN ASN ALA ALA ILE ALA ALA PRO GLY          
SEQRES   8 D  256  SER ALA LEU THR VAL ARG LEU PRO GLU TRP ARG ARG VAL          
SEQRES   9 D  256  LEU GLU VAL ASN LEU THR ALA PRO MET HIS LEU SER ALA          
SEQRES  10 D  256  LEU ALA ALA ARG GLU MET ARG LYS VAL GLY GLY GLY ALA          
SEQRES  11 D  256  ILE VAL ASN VAL ALA SER VAL GLN GLY LEU PHE ALA GLU          
SEQRES  12 D  256  GLN GLU ASN ALA ALA TYR ASN ALA SER LYS GLY GLY LEU          
SEQRES  13 D  256  VAL ASN LEU THR ARG SER LEU ALA LEU ASP LEU ALA PRO          
SEQRES  14 D  256  LEU ARG ILE ARG VAL ASN ALA VAL ALA PRO GLY ALA ILE          
SEQRES  15 D  256  ALA THR GLU ALA VAL LEU GLU ALA ILE ALA LEU SER PRO          
SEQRES  16 D  256  ASP PRO GLU ARG THR ARG ARG ASP TRP GLU ASP LEU HIS          
SEQRES  17 D  256  ALA LEU ARG ARG LEU GLY LYS PRO GLU GLU VAL ALA GLU          
SEQRES  18 D  256  ALA VAL LEU PHE LEU ALA SER GLU LYS ALA SER PHE ILE          
SEQRES  19 D  256  THR GLY ALA ILE LEU PRO VAL ASP GLY GLY MET THR ALA          
SEQRES  20 D  256  SER PHE MET MET ALA GLY ARG PRO VAL                          
HET    NAD  A1001      44                                                       
HET    NAD  B1002      44                                                       
HET    NAD  C1003      44                                                       
HET    NAD  D1004      44                                                       
HETNAM     NAD NICOTINAMIDE-ADENINE-DINUCLEOTIDE                                
FORMUL   5  NAD    4(C21 H27 N7 O14 P2)                                         
FORMUL   9  HOH   *827(H2 O)                                                    
HELIX    1   1 ARG A   16  GLU A   29  1                                  14    
HELIX    2   2 GLU A   41  GLY A   50  1                                  10    
HELIX    3   3 ASP A   60  GLY A   76  1                                  17    
HELIX    4   4 ARG A   97  LEU A  109  1                                  13    
HELIX    5   5 LEU A  109  LYS A  125  1                                  17    
HELIX    6   6 SER A  136  LEU A  140  5                                   5    
HELIX    7   7 ASN A  146  ALA A  168  1                                  23    
HELIX    8   8 THR A  184  ALA A  192  1                                   9    
HELIX    9   9 ARG A  201  ASP A  206  1                                   6    
HELIX   10  10 LYS A  215  SER A  228  1                                  14    
HELIX   11  11 GLU A  229  SER A  232  5                                   4    
HELIX   12  12 GLY A  244  SER A  248  5                                   5    
HELIX   13  13 ARG B   16  GLU B   29  1                                  14    
HELIX   14  14 GLU B   41  GLY B   50  1                                  10    
HELIX   15  15 ASP B   60  GLY B   76  1                                  17    
HELIX   16  16 ARG B   97  LEU B  109  1                                  13    
HELIX   17  17 LEU B  109  ARG B  124  1                                  16    
HELIX   18  18 LYS B  125  GLY B  127  5                                   3    
HELIX   19  19 SER B  136  LEU B  140  5                                   5    
HELIX   20  20 ASN B  146  ALA B  168  1                                  23    
HELIX   21  21 THR B  184  ILE B  191  1                                   8    
HELIX   22  22 ARG B  199  ASP B  206  1                                   8    
HELIX   23  23 LYS B  215  SER B  228  1                                  14    
HELIX   24  24 GLU B  229  SER B  232  5                                   4    
HELIX   25  25 GLY B  244  SER B  248  5                                   5    
HELIX   26  26 ARG C   16  GLU C   29  1                                  14    
HELIX   27  27 GLU C   41  ILE C   49  1                                   9    
HELIX   28  28 ASP C   60  GLY C   76  1                                  17    
HELIX   29  29 ARG C   97  LEU C  109  1                                  13    
HELIX   30  30 LEU C  109  ARG C  124  1                                  16    
HELIX   31  31 LYS C  125  GLY C  127  5                                   3    
HELIX   32  32 SER C  136  LEU C  140  5                                   5    
HELIX   33  33 ASN C  146  ALA C  168  1                                  23    
HELIX   34  34 THR C  184  LEU C  193  1                                  10    
HELIX   35  35 ASP C  196  ASP C  206  1                                  11    
HELIX   36  36 LYS C  215  SER C  228  1                                  14    
HELIX   37  37 GLU C  229  SER C  232  5                                   4    
HELIX   38  38 GLY C  244  SER C  248  5                                   5    
HELIX   39  39 ARG D   16  GLU D   29  1                                  14    
HELIX   40  40 GLU D   41  GLY D   50  1                                  10    
HELIX   41  41 ASP D   60  GLY D   76  1                                  17    
HELIX   42  42 ARG D   97  LEU D  109  1                                  13    
HELIX   43  43 LEU D  109  ARG D  124  1                                  16    
HELIX   44  44 LYS D  125  GLY D  127  5                                   3    
HELIX   45  45 SER D  136  LEU D  140  5                                   5    
HELIX   46  46 ASN D  146  ALA D  168  1                                  23    
HELIX   47  47 ALA D  186  ILE D  191  1                                   6    
HELIX   48  48 THR D  200  ASP D  206  1                                   7    
HELIX   49  49 LYS D  215  SER D  228  1                                  14    
HELIX   50  50 GLU D  229  SER D  232  5                                   4    
HELIX   51  51 GLY D  244  SER D  248  5                                   5    
SHEET    1   A 7 ALA A  52  GLN A  55  0                                        
SHEET    2   A 7 LEU A  32  ASP A  37  1  N  VAL A  33   O  ALA A  52           
SHEET    3   A 7 GLY A   8  THR A  12  1  N  VAL A   9   O  LEU A  32           
SHEET    4   A 7 VAL A  80  ASN A  83  1  O  VAL A  80   N  LEU A  10           
SHEET    5   A 7 GLY A 129  VAL A 134  1  O  VAL A 134   N  ASN A  83           
SHEET    6   A 7 ILE A 172  PRO A 179  1  O  ASN A 175   N  ASN A 133           
SHEET    7   A 7 ILE A 238  VAL A 241  1  O  LEU A 239   N  ALA A 176           
SHEET    1   B 7 ALA B  52  GLN B  55  0                                        
SHEET    2   B 7 LEU B  32  ASP B  37  1  N  VAL B  33   O  ALA B  52           
SHEET    3   B 7 GLY B   8  THR B  12  1  N  VAL B   9   O  ALA B  34           
SHEET    4   B 7 VAL B  80  ASN B  83  1  O  VAL B  80   N  LEU B  10           
SHEET    5   B 7 GLY B 129  VAL B 134  1  O  VAL B 134   N  ASN B  83           
SHEET    6   B 7 ILE B 172  PRO B 179  1  O  ASN B 175   N  ASN B 133           
SHEET    7   B 7 ILE B 238  VAL B 241  1  O  LEU B 239   N  ALA B 176           
SHEET    1   C 7 ALA C  52  GLN C  55  0                                        
SHEET    2   C 7 LEU C  32  ASP C  37  1  N  VAL C  33   O  ALA C  52           
SHEET    3   C 7 GLY C   8  THR C  12  1  N  VAL C   9   O  ALA C  34           
SHEET    4   C 7 VAL C  80  ASN C  83  1  O  VAL C  80   N  LEU C  10           
SHEET    5   C 7 GLY C 129  VAL C 134  1  O  VAL C 134   N  ASN C  83           
SHEET    6   C 7 ILE C 172  PRO C 179  1  O  ASN C 175   N  ASN C 133           
SHEET    7   C 7 ILE C 238  VAL C 241  1  O  LEU C 239   N  ALA C 176           
SHEET    1   D 7 ALA D  52  GLN D  55  0                                        
SHEET    2   D 7 LEU D  32  ASP D  37  1  N  VAL D  33   O  ALA D  52           
SHEET    3   D 7 GLY D   8  THR D  12  1  N  VAL D   9   O  ALA D  34           
SHEET    4   D 7 VAL D  80  ASN D  83  1  O  VAL D  80   N  LEU D  10           
SHEET    5   D 7 GLY D 129  VAL D 134  1  O  VAL D 134   N  ASN D  83           
SHEET    6   D 7 ILE D 172  PRO D 179  1  O  ASN D 175   N  ASN D 133           
SHEET    7   D 7 ILE D 238  VAL D 241  1  O  LEU D 239   N  ALA D 176           
SITE     1 AC1 29 GLY A  13  ARG A  16  GLY A  17  ILE A  18                    
SITE     2 AC1 29 ASP A  37  LEU A  38  ARG A  39  VAL A  56                    
SITE     3 AC1 29 ASP A  57  LEU A  58  ASN A  84  ALA A  85                    
SITE     4 AC1 29 ALA A  86  ILE A  87  VAL A 134  ALA A 135                    
SITE     5 AC1 29 SER A 136  TYR A 149  LYS A 153  PRO A 179                    
SITE     6 AC1 29 GLY A 180  ILE A 182  THR A 184  ALA A 186                    
SITE     7 AC1 29 VAL A 187  HOH A1028  HOH A1044  HOH A1096                    
SITE     8 AC1 29 HOH A1104                                                     
SITE     1 AC2 28 GLY B  13  ARG B  16  GLY B  17  ILE B  18                    
SITE     2 AC2 28 ASP B  37  LEU B  38  ARG B  39  VAL B  56                    
SITE     3 AC2 28 ASP B  57  LEU B  58  ASN B  84  ALA B  85                    
SITE     4 AC2 28 ALA B  86  ILE B  87  VAL B 134  ALA B 135                    
SITE     5 AC2 28 SER B 136  TYR B 149  LYS B 153  PRO B 179                    
SITE     6 AC2 28 GLY B 180  ILE B 182  THR B 184  VAL B 187                    
SITE     7 AC2 28 HOH B1043  HOH B1079  HOH B1090  HOH B1127                    
SITE     1 AC3 31 GLY C  13  ARG C  16  GLY C  17  ILE C  18                    
SITE     2 AC3 31 ASP C  37  LEU C  38  ARG C  39  VAL C  56                    
SITE     3 AC3 31 ASP C  57  LEU C  58  ASN C  84  ALA C  85                    
SITE     4 AC3 31 ALA C  86  ILE C  87  VAL C 134  ALA C 135                    
SITE     5 AC3 31 SER C 136  TYR C 149  LYS C 153  PRO C 179                    
SITE     6 AC3 31 GLY C 180  ALA C 181  ILE C 182  THR C 184                    
SITE     7 AC3 31 ALA C 186  VAL C 187  HOH C1006  HOH C1007                    
SITE     8 AC3 31 HOH C1049  HOH C1077  HOH C1150                               
SITE     1 AC4 31 GLY D  13  ARG D  16  GLY D  17  ILE D  18                    
SITE     2 AC4 31 ASP D  37  LEU D  38  ARG D  39  VAL D  56                    
SITE     3 AC4 31 ASP D  57  LEU D  58  ASN D  84  ALA D  85                    
SITE     4 AC4 31 ALA D  86  ILE D  87  VAL D 134  ALA D 135                    
SITE     5 AC4 31 SER D 136  TYR D 149  LYS D 153  PRO D 179                    
SITE     6 AC4 31 GLY D 180  ALA D 181  ILE D 182  THR D 184                    
SITE     7 AC4 31 ALA D 186  VAL D 187  HOH D1020  HOH D1039                    
SITE     8 AC4 31 HOH D1052  HOH D1109  HOH D1157                               
CRYST1   71.391   95.334   71.409  90.00 108.25  90.00 P 1 21 1      8          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      0.014007  0.000000  0.004620        0.00000                         
SCALE2      0.000000  0.010489  0.000000        0.00000                         
SCALE3      0.000000  0.000000  0.014746        0.00000                         
(ATOM LINES ARE NOT SHOWN.)
END                                                                             
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