GenomeNet

Database: PDB
Entry: 3GJY
LinkDB: 3GJY
Original site: 3GJY 
HEADER    TRANSFERASE                             09-MAR-09   3GJY              
TITLE     CRYSTAL STRUCTURE OF A PROBABLE SPERMIDINE SYNTHASE FROM              
TITLE    2 CORYNEBACTERIUM GLUTAMICUM ATCC 13032                                
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: SPERMIDINE SYNTHASE;                                       
COMPND   3 CHAIN: A;                                                            
COMPND   4 ENGINEERED: YES                                                      
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: CORYNEBACTERIUM GLUTAMICUM ATCC 13032;          
SOURCE   3 ORGANISM_TAXID: 196627;                                              
SOURCE   4 STRAIN: DSM 20300 / JCM 1318 / LMG 3730 / NCIMB 10025;               
SOURCE   5 ATCC: 13032;                                                         
SOURCE   6 GENE: CGL1237, CG1394;                                               
SOURCE   7 EXPRESSION_SYSTEM: ESCHERICHIA COLI;                                 
SOURCE   8 EXPRESSION_SYSTEM_TAXID: 562;                                        
SOURCE   9 EXPRESSION_SYSTEM_STRAIN: BL21;                                      
SOURCE  10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID;                              
SOURCE  11 EXPRESSION_SYSTEM_PLASMID: PMCSG19                                   
KEYWDS    APC62791, SPERMIDINE SYNTHASE, CORYNEBACTERIUM GLUTAMICUM             
KEYWDS   2 ATCC 13032, STRUCTURAL GENOMICS, PSI-2, PROTEIN STRUCTURE            
KEYWDS   3 INITIATIVE, MIDWEST CENTER FOR STRUCTURAL GENOMICS, MCSG,            
KEYWDS   4 TRANSFERASE                                                          
EXPDTA    X-RAY DIFFRACTION                                                     
AUTHOR    K.TAN,H.LI,L.FREEMAN,A.JOACHIMIAK,MIDWEST CENTER FOR                  
AUTHOR   2 STRUCTURAL GENOMICS (MCSG)                                           
REVDAT   1   24-MAR-09 3GJY    0                                                
JRNL        AUTH   K.TAN,H.LI,L.FREEMAN,A.JOACHIMIAK                            
JRNL        TITL   THE CRYSTAL STRUCTURE OF A PROBABLE SPERMIDINE               
JRNL        TITL 2 SYNTHASE FROM CORYNEBACTERIUM GLUTAMICUM ATCC                
JRNL        TITL 3 13032.                                                       
JRNL        REF    TO BE PUBLISHED                                              
JRNL        REFN                                                                
REMARK   1                                                                      
REMARK   2                                                                      
REMARK   2 RESOLUTION.    1.47 ANGSTROMS.                                       
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : REFMAC 5.5.0054                                      
REMARK   3   AUTHORS     : MURSHUDOV,VAGIN,DODSON                               
REMARK   3                                                                      
REMARK   3    REFINEMENT TARGET : MAXIMUM LIKELIHOOD                            
REMARK   3                                                                      
REMARK   3  DATA USED IN REFINEMENT.                                            
REMARK   3   RESOLUTION RANGE HIGH (ANGSTROMS) : 1.47                           
REMARK   3   RESOLUTION RANGE LOW  (ANGSTROMS) : 22.62                          
REMARK   3   DATA CUTOFF            (SIGMA(F)) : 0.000                          
REMARK   3   COMPLETENESS FOR RANGE        (%) : 99.3                           
REMARK   3   NUMBER OF REFLECTIONS             : 48639                          
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT.                                     
REMARK   3   CROSS-VALIDATION METHOD          : THROUGHOUT                      
REMARK   3   FREE R VALUE TEST SET SELECTION  : RANDOM                          
REMARK   3   R VALUE     (WORKING + TEST SET) : 0.159                           
REMARK   3   R VALUE            (WORKING SET) : 0.157                           
REMARK   3   FREE R VALUE                     : 0.192                           
REMARK   3   FREE R VALUE TEST SET SIZE   (%) : 5.100                           
REMARK   3   FREE R VALUE TEST SET COUNT      : 2614                            
REMARK   3                                                                      
REMARK   3  FIT IN THE HIGHEST RESOLUTION BIN.                                  
REMARK   3   TOTAL NUMBER OF BINS USED           : 20                           
REMARK   3   BIN RESOLUTION RANGE HIGH       (A) : 1.47                         
REMARK   3   BIN RESOLUTION RANGE LOW        (A) : 1.51                         
REMARK   3   REFLECTION IN BIN     (WORKING SET) : 3414                         
REMARK   3   BIN COMPLETENESS (WORKING+TEST) (%) : 95.72                        
REMARK   3   BIN R VALUE           (WORKING SET) : 0.2270                       
REMARK   3   BIN FREE R VALUE SET COUNT          : 162                          
REMARK   3   BIN FREE R VALUE                    : 0.2550                       
REMARK   3                                                                      
REMARK   3  NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.                    
REMARK   3   PROTEIN ATOMS            : 2251                                    
REMARK   3   NUCLEIC ACID ATOMS       : 0                                       
REMARK   3   HETEROGEN ATOMS          : 0                                       
REMARK   3   SOLVENT ATOMS            : 388                                     
REMARK   3                                                                      
REMARK   3  B VALUES.                                                           
REMARK   3   FROM WILSON PLOT           (A**2) : NULL                           
REMARK   3   MEAN B VALUE      (OVERALL, A**2) : 20.23                          
REMARK   3   OVERALL ANISOTROPIC B VALUE.                                       
REMARK   3    B11 (A**2) : -0.01000                                             
REMARK   3    B22 (A**2) : 0.04000                                              
REMARK   3    B33 (A**2) : -0.02000                                             
REMARK   3    B12 (A**2) : 0.00000                                              
REMARK   3    B13 (A**2) : 0.00000                                              
REMARK   3    B23 (A**2) : 0.00000                                              
REMARK   3                                                                      
REMARK   3  ESTIMATED OVERALL COORDINATE ERROR.                                 
REMARK   3   ESU BASED ON R VALUE                            (A): 0.077         
REMARK   3   ESU BASED ON FREE R VALUE                       (A): 0.067         
REMARK   3   ESU BASED ON MAXIMUM LIKELIHOOD                 (A): 0.035         
REMARK   3   ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.009         
REMARK   3                                                                      
REMARK   3 CORRELATION COEFFICIENTS.                                            
REMARK   3   CORRELATION COEFFICIENT FO-FC      : 0.970                         
REMARK   3   CORRELATION COEFFICIENT FO-FC FREE : 0.954                         
REMARK   3                                                                      
REMARK   3  RMS DEVIATIONS FROM IDEAL VALUES        COUNT    RMS    WEIGHT      
REMARK   3   BOND LENGTHS REFINED ATOMS        (A):  2323 ; 0.014 ; 0.022       
REMARK   3   BOND LENGTHS OTHERS               (A):  NULL ;  NULL ;  NULL       
REMARK   3   BOND ANGLES REFINED ATOMS   (DEGREES):  3181 ; 1.459 ; 1.945       
REMARK   3   BOND ANGLES OTHERS          (DEGREES):  NULL ;  NULL ;  NULL       
REMARK   3   TORSION ANGLES, PERIOD 1    (DEGREES):   315 ; 6.159 ; 5.000       
REMARK   3   TORSION ANGLES, PERIOD 2    (DEGREES):   113 ;34.834 ;23.274       
REMARK   3   TORSION ANGLES, PERIOD 3    (DEGREES):   379 ;12.740 ;15.000       
REMARK   3   TORSION ANGLES, PERIOD 4    (DEGREES):    21 ;17.204 ;15.000       
REMARK   3   CHIRAL-CENTER RESTRAINTS       (A**3):   348 ; 0.110 ; 0.200       
REMARK   3   GENERAL PLANES REFINED ATOMS      (A):  1832 ; 0.008 ; 0.021       
REMARK   3   GENERAL PLANES OTHERS             (A):  NULL ;  NULL ;  NULL       
REMARK   3   NON-BONDED CONTACTS REFINED ATOMS (A):  NULL ;  NULL ;  NULL       
REMARK   3   NON-BONDED CONTACTS OTHERS        (A):  NULL ;  NULL ;  NULL       
REMARK   3   NON-BONDED TORSION REFINED ATOMS  (A):  NULL ;  NULL ;  NULL       
REMARK   3   NON-BONDED TORSION OTHERS         (A):  NULL ;  NULL ;  NULL       
REMARK   3   H-BOND (X...Y) REFINED ATOMS      (A):  NULL ;  NULL ;  NULL       
REMARK   3   H-BOND (X...Y) OTHERS             (A):  NULL ;  NULL ;  NULL       
REMARK   3   POTENTIAL METAL-ION REFINED ATOMS (A):  NULL ;  NULL ;  NULL       
REMARK   3   POTENTIAL METAL-ION OTHERS        (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY VDW REFINED ATOMS        (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY VDW OTHERS               (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY H-BOND REFINED ATOMS     (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY H-BOND OTHERS            (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY METAL-ION REFINED ATOMS  (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY METAL-ION OTHERS         (A):  NULL ;  NULL ;  NULL       
REMARK   3                                                                      
REMARK   3  ISOTROPIC THERMAL FACTOR RESTRAINTS.     COUNT   RMS    WEIGHT      
REMARK   3   MAIN-CHAIN BOND REFINED ATOMS  (A**2):  1445 ; 1.454 ; 1.500       
REMARK   3   MAIN-CHAIN BOND OTHER ATOMS    (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   MAIN-CHAIN ANGLE REFINED ATOMS (A**2):  2340 ; 2.231 ; 2.000       
REMARK   3   SIDE-CHAIN BOND REFINED ATOMS  (A**2):   878 ; 3.140 ; 3.000       
REMARK   3   SIDE-CHAIN ANGLE REFINED ATOMS (A**2):   821 ; 4.535 ; 4.500       
REMARK   3                                                                      
REMARK   3 ANISOTROPIC THERMAL FACTOR RESTRAINTS.    COUNT   RMS   WEIGHT       
REMARK   3   RIGID-BOND RESTRAINTS          (A**2):  2323 ; 1.702 ; 3.000       
REMARK   3   SPHERICITY; FREE ATOMS         (A**2):   385 ; 6.758 ; 3.000       
REMARK   3   SPHERICITY; BONDED ATOMS       (A**2):  2254 ; 4.150 ; 3.000       
REMARK   3                                                                      
REMARK   3  NCS RESTRAINTS STATISTICS                                           
REMARK   3   NUMBER OF DIFFERENT NCS GROUPS : NULL                              
REMARK   3                                                                      
REMARK   3  TLS DETAILS                                                         
REMARK   3   NUMBER OF TLS GROUPS  : NULL                                       
REMARK   3                                                                      
REMARK   3  BULK SOLVENT MODELLING.                                             
REMARK   3   METHOD USED : MASK                                                 
REMARK   3   PARAMETERS FOR MASK CALCULATION                                    
REMARK   3   VDW PROBE RADIUS   : 1.20                                          
REMARK   3   ION PROBE RADIUS   : 0.80                                          
REMARK   3   SHRINKAGE RADIUS   : 0.80                                          
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE          
REMARK   3  RIDING POSITIONS                                                    
REMARK   4                                                                      
REMARK   4 3GJY COMPLIES WITH FORMAT V. 3.20, 01-DEC-08                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 10-MAR-09.                  
REMARK 100 THE RCSB ID CODE IS RCSB051954.                                      
REMARK 200                                                                      
REMARK 200 EXPERIMENTAL DETAILS                                                 
REMARK 200  EXPERIMENT TYPE                : X-RAY DIFFRACTION                  
REMARK 200  DATE OF DATA COLLECTION        : 23-NOV-08                          
REMARK 200  TEMPERATURE           (KELVIN) : 100                                
REMARK 200  PH                             : 8.0                                
REMARK 200  NUMBER OF CRYSTALS USED        : 1                                  
REMARK 200                                                                      
REMARK 200  SYNCHROTRON              (Y/N) : Y                                  
REMARK 200  RADIATION SOURCE               : APS                                
REMARK 200  BEAMLINE                       : 19-ID                              
REMARK 200  X-RAY GENERATOR MODEL          : NULL                               
REMARK 200  MONOCHROMATIC OR LAUE    (M/L) : M                                  
REMARK 200  WAVELENGTH OR RANGE        (A) : 0.97915                            
REMARK 200  MONOCHROMATOR                  : SI(111) CRYSTAL                    
REMARK 200  OPTICS                         : MIRROR                             
REMARK 200                                                                      
REMARK 200  DETECTOR TYPE                  : CCD                                
REMARK 200  DETECTOR MANUFACTURER          : ADSC QUANTUM 315                   
REMARK 200  INTENSITY-INTEGRATION SOFTWARE : HKL-3000                           
REMARK 200  DATA SCALING SOFTWARE          : HKL-3000                           
REMARK 200                                                                      
REMARK 200  NUMBER OF UNIQUE REFLECTIONS   : 51371                              
REMARK 200  RESOLUTION RANGE HIGH      (A) : 1.470                              
REMARK 200  RESOLUTION RANGE LOW       (A) : 23.000                             
REMARK 200  REJECTION CRITERIA  (SIGMA(I)) : 0.000                              
REMARK 200                                                                      
REMARK 200 OVERALL.                                                             
REMARK 200  COMPLETENESS FOR RANGE     (%) : 99.4                               
REMARK 200  DATA REDUNDANCY                : 8.200                              
REMARK 200  R MERGE                    (I) : 0.06800                            
REMARK 200  R SYM                      (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR THE DATA SET  : 43.5000                            
REMARK 200                                                                      
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.                                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.47                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE LOW  (A) : 1.50                     
REMARK 200  COMPLETENESS FOR SHELL     (%) : 95.6                               
REMARK 200  DATA REDUNDANCY IN SHELL       : 6.60                               
REMARK 200  R MERGE FOR SHELL          (I) : 0.48200                            
REMARK 200  R SYM FOR SHELL            (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR SHELL         : 2.880                              
REMARK 200                                                                      
REMARK 200 DIFFRACTION PROTOCOL: SAD                                            
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD                          
REMARK 200 SOFTWARE USED: SHELXD, MLPHARE, DM, ARP/WARP, HKL-3000               
REMARK 200 STARTING MODEL: NULL                                                 
REMARK 200                                                                      
REMARK 200 REMARK: NULL                                                         
REMARK 280                                                                      
REMARK 280 CRYSTAL                                                              
REMARK 280 SOLVENT CONTENT, VS   (%): 42.30                                     
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.13                     
REMARK 280                                                                      
REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M POTASSIUM SODIUM TARTRATE, 20%      
REMARK 280  PEG 3350, PH 8.0, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE        
REMARK 280  289K                                                                
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY                                            
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21                       
REMARK 290                                                                      
REMARK 290      SYMOP   SYMMETRY                                                
REMARK 290     NNNMMM   OPERATOR                                                
REMARK 290       1555   X,Y,Z                                                   
REMARK 290       2555   -X+1/2,-Y,Z+1/2                                         
REMARK 290       3555   -X,Y+1/2,-Z+1/2                                         
REMARK 290       4555   X+1/2,-Y+1/2,-Z                                         
REMARK 290                                                                      
REMARK 290     WHERE NNN -> OPERATOR NUMBER                                     
REMARK 290           MMM -> TRANSLATION VECTOR                                  
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS                            
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM             
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY                
REMARK 290 RELATED MOLECULES.                                                   
REMARK 290   SMTRY1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   2 -1.000000  0.000000  0.000000       26.45450            
REMARK 290   SMTRY2   2  0.000000 -1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   2  0.000000  0.000000  1.000000       43.65400            
REMARK 290   SMTRY1   3 -1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   3  0.000000  1.000000  0.000000       32.50450            
REMARK 290   SMTRY3   3  0.000000  0.000000 -1.000000       43.65400            
REMARK 290   SMTRY1   4  1.000000  0.000000  0.000000       26.45450            
REMARK 290   SMTRY2   4  0.000000 -1.000000  0.000000       32.50450            
REMARK 290   SMTRY3   4  0.000000  0.000000 -1.000000        0.00000            
REMARK 290                                                                      
REMARK 290 REMARK: NULL                                                         
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1                                                       
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 300 REMARK: AUTHORS STATE THAT THE BIOLOGICAL UNIT OF THIS PROTEIN       
REMARK 300 IS EXPERIMENTALLY UNKNOWN.                                           
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC                  
REMARK 350 SOFTWARE USED: PISA                                                  
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A                                     
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 465                                                                      
REMARK 465 MISSING RESIDUES                                                     
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE                       
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)                
REMARK 465                                                                      
REMARK 465   M RES C SSSEQI                                                     
REMARK 465     SER A    -2                                                      
REMARK 465     ASN A    -1                                                      
REMARK 465     ALA A     0                                                      
REMARK 465     MSE A     1                                                      
REMARK 465     ALA A     2                                                      
REMARK 465     ARG A     3                                                      
REMARK 465     LYS A     4                                                      
REMARK 465     LYS A     5                                                      
REMARK 465     ASN A     6                                                      
REMARK 465     THR A     7                                                      
REMARK 465     SER A     8                                                      
REMARK 465     ASP A     9                                                      
REMARK 465     GLN A    10                                                      
REMARK 465     SER A    11                                                      
REMARK 465     ARG A    12                                                      
REMARK 465     SER A    13                                                      
REMARK 465     GLN A    14                                                      
REMARK 465     ALA A    15                                                      
REMARK 465     ALA A    16                                                      
REMARK 465     ASN A    17                                                      
REMARK 465     SER A   297                                                      
REMARK 465     ASP A   298                                                      
REMARK 465     THR A   299                                                      
REMARK 465     PRO A   300                                                      
REMARK 465     GLN A   301                                                      
REMARK 465     HIS A   302                                                      
REMARK 465     PRO A   303                                                      
REMARK 465     ALA A   304                                                      
REMARK 465     GLU A   305                                                      
REMARK 465     THR A   306                                                      
REMARK 465     PRO A   307                                                      
REMARK 465     GLU A   308                                                      
REMARK 465     HIS A   309                                                      
REMARK 465     SER A   310                                                      
REMARK 465     ASN A   311                                                      
REMARK 465     THR A   312                                                      
REMARK 465     GLN A   313                                                      
REMARK 465     PRO A   314                                                      
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT                     
REMARK 500                                                                      
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.                            
REMARK 500                                                                      
REMARK 500  ATM1  RES C  SSEQI   ATM2  RES C  SSEQI           DISTANCE          
REMARK 500   OG   SER A   151     O    HOH A   394              1.83            
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: COVALENT BOND ANGLES                                       
REMARK 500                                                                      
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES              
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE               
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                 
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1)              
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999                        
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996                     
REMARK 500                                                                      
REMARK 500  M RES CSSEQI ATM1   ATM2   ATM3                                     
REMARK 500    ARG A 157   NE  -  CZ  -  NH2 ANGL. DEV. =   4.0 DEGREES          
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500    ALA A  97       11.48     58.41                                   
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS                                         
REMARK 500                                                                      
REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH          
REMARK 500 CIS AND TRANS CONFORMATION.  CIS BONDS, IF ANY, ARE LISTED           
REMARK 500 ON CISPEP RECORDS.  TRANS IS DEFINED AS 180 +/- 30 AND               
REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES.                                  
REMARK 500                                 MODEL     OMEGA                      
REMARK 500 HIS A  200     SER A  201                 -148.81                    
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 800                                                                      
REMARK 800 SITE                                                                 
REMARK 800 SITE_IDENTIFIER: AC1                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMT A 315                 
REMARK 900                                                                      
REMARK 900 RELATED ENTRIES                                                      
REMARK 900 RELATED ID: APC62791   RELATED DB: TARGETDB                          
DBREF  3GJY A    1   314  UNP    Q8NR27   Q8NR27_CORGL     1    314             
SEQADV 3GJY SER A   -2  UNP  Q8NR27              EXPRESSION TAG                 
SEQADV 3GJY ASN A   -1  UNP  Q8NR27              EXPRESSION TAG                 
SEQADV 3GJY ALA A    0  UNP  Q8NR27              EXPRESSION TAG                 
SEQRES   1 A  317  SER ASN ALA MSE ALA ARG LYS LYS ASN THR SER ASP GLN          
SEQRES   2 A  317  SER ARG SER GLN ALA ALA ASN THR PRO ILE ALA GLY THR          
SEQRES   3 A  317  TYR GLU GLY GLU TYR SER VAL ILE GLU LEU GLU ALA ASP          
SEQRES   4 A  317  SER TYR THR THR ASP GLY TRP LEU ILE SER ILE ASN GLY          
SEQRES   5 A  317  VAL PRO SER SER HIS ILE VAL LEU GLY GLN PRO GLN ALA          
SEQRES   6 A  317  LEU GLU PHE GLU TYR MSE ARG TRP ILE ALA THR GLY ALA          
SEQRES   7 A  317  ARG ALA PHE ILE ASP ALA HIS GLN ASP ALA SER LYS LEU          
SEQRES   8 A  317  ARG ILE THR HIS LEU GLY GLY GLY ALA CYS THR MSE ALA          
SEQRES   9 A  317  ARG TYR PHE ALA ASP VAL TYR PRO GLN SER ARG ASN THR          
SEQRES  10 A  317  VAL VAL GLU LEU ASP ALA GLU LEU ALA ARG LEU SER ARG          
SEQRES  11 A  317  GLU TRP PHE ASP ILE PRO ARG ALA PRO ARG VAL LYS ILE          
SEQRES  12 A  317  ARG VAL ASP ASP ALA ARG MSE VAL ALA GLU SER PHE THR          
SEQRES  13 A  317  PRO ALA SER ARG ASP VAL ILE ILE ARG ASP VAL PHE ALA          
SEQRES  14 A  317  GLY ALA ILE THR PRO GLN ASN PHE THR THR VAL GLU PHE          
SEQRES  15 A  317  PHE GLU HIS CYS HIS ARG GLY LEU ALA PRO GLY GLY LEU          
SEQRES  16 A  317  TYR VAL ALA ASN CYS GLY ASP HIS SER ASP LEU ARG GLY          
SEQRES  17 A  317  ALA LYS SER GLU LEU ALA GLY MSE MSE GLU VAL PHE GLU          
SEQRES  18 A  317  HIS VAL ALA VAL ILE ALA ASP PRO PRO MSE LEU LYS GLY          
SEQRES  19 A  317  ARG ARG TYR GLY ASN ILE ILE LEU MSE GLY SER ASP THR          
SEQRES  20 A  317  GLU PHE PHE SER SER ASN SER THR GLU ALA SER ALA ILE          
SEQRES  21 A  317  THR ARG GLU LEU LEU GLY GLY GLY VAL PRO ALA GLN TYR          
SEQRES  22 A  317  LYS ASP GLU SER TRP VAL ARG LYS PHE ALA SER GLY ALA          
SEQRES  23 A  317  GLN ALA ARG HIS ASP GLY VAL SER THR LEU GLN MSE PRO          
SEQRES  24 A  317  SER ASP THR PRO GLN HIS PRO ALA GLU THR PRO GLU HIS          
SEQRES  25 A  317  SER ASN THR GLN PRO                                          
MODRES 3GJY MSE A   68  MET  SELENOMETHIONINE                                   
MODRES 3GJY MSE A  100  MET  SELENOMETHIONINE                                   
MODRES 3GJY MSE A  147  MET  SELENOMETHIONINE                                   
MODRES 3GJY MSE A  213  MET  SELENOMETHIONINE                                   
MODRES 3GJY MSE A  214  MET  SELENOMETHIONINE                                   
MODRES 3GJY MSE A  228  MET  SELENOMETHIONINE                                   
MODRES 3GJY MSE A  240  MET  SELENOMETHIONINE                                   
MODRES 3GJY MSE A  295  MET  SELENOMETHIONINE                                   
HET    MSE  A  68       8                                                       
HET    MSE  A 100      13                                                       
HET    MSE  A 147      13                                                       
HET    MSE  A 213       8                                                       
HET    MSE  A 214       8                                                       
HET    MSE  A 228       8                                                       
HET    MSE  A 240       8                                                       
HET    MSE  A 295       8                                                       
HET    FMT  A 315       3                                                       
HETNAM     MSE SELENOMETHIONINE                                                 
HETNAM     FMT FORMIC ACID                                                      
FORMUL   1  MSE    8(C5 H11 N O2 SE)                                            
FORMUL   2  FMT    C H2 O2                                                      
FORMUL   3  HOH   *385(H2 O)                                                    
HELIX    1   1 PHE A   65  GLN A   83  1                                  19    
HELIX    2   2 ASP A   84  LYS A   87  5                                   4    
HELIX    3   3 GLY A   95  ALA A   97  5                                   3    
HELIX    4   4 CYS A   98  TYR A  108  1                                  11    
HELIX    5   5 ASP A  119  PHE A  130  1                                  12    
HELIX    6   6 ASP A  144  SER A  151  1                                   8    
HELIX    7   7 PRO A  171  THR A  175  5                                   5    
HELIX    8   8 THR A  176  GLY A  186  1                                  11    
HELIX    9   9 LEU A  203  PHE A  217  1                                  15    
HELIX   10  10 ASP A  225  LYS A  230  1                                   6    
HELIX   11  11 SER A  251  LEU A  262  1                                  12    
HELIX   12  12 ASP A  272  ALA A  280  1                                   9    
SHEET    1   A 4 GLY A  22  GLU A  25  0                                        
SHEET    2   A 4 VAL A  30  ALA A  35 -1  O  ILE A  31   N  TYR A  24           
SHEET    3   A 4 GLY A  42  ILE A  47 -1  O  LEU A  44   N  GLU A  34           
SHEET    4   A 4 VAL A  50  VAL A  56 -1  O  SER A  52   N  ILE A  45           
SHEET    1   B 8 VAL A 138  VAL A 142  0                                        
SHEET    2   B 8 ARG A 112  GLU A 117  1  N  VAL A 115   O  ARG A 141           
SHEET    3   B 8 ARG A  89  LEU A  93  1  N  HIS A  92   O  THR A 114           
SHEET    4   B 8 ARG A 157  ARG A 162  1  O  ILE A 161   N  LEU A  93           
SHEET    5   B 8 LEU A 187  ASP A 199  1  O  ASN A 196   N  ARG A 162           
SHEET    6   B 8 GLY A 235  SER A 242 -1  O  GLY A 241   N  TYR A 193           
SHEET    7   B 8 HIS A 219  ALA A 224 -1  N  ILE A 223   O  ILE A 238           
SHEET    8   B 8 GLN A 269  LYS A 271 -1  O  LYS A 271   N  VAL A 222           
LINK         C   TYR A  67                 N   MSE A  68     1555   1555  1.34  
LINK         C   MSE A  68                 N   ARG A  69     1555   1555  1.35  
LINK         C   THR A  99                 N   MSE A 100     1555   1555  1.34  
LINK         C   MSE A 100                 N   ALA A 101     1555   1555  1.34  
LINK         C   ARG A 146                 N   MSE A 147     1555   1555  1.33  
LINK         C   MSE A 147                 N   VAL A 148     1555   1555  1.33  
LINK         C   GLY A 212                 N   MSE A 213     1555   1555  1.33  
LINK         C   MSE A 213                 N   MSE A 214     1555   1555  1.34  
LINK         C   MSE A 214                 N   GLU A 215     1555   1555  1.33  
LINK         C   PRO A 227                 N   MSE A 228     1555   1555  1.33  
LINK         C   MSE A 228                 N   LEU A 229     1555   1555  1.33  
LINK         C   LEU A 239                 N   MSE A 240     1555   1555  1.34  
LINK         C   MSE A 240                 N   GLY A 241     1555   1555  1.33  
LINK         C   GLN A 294                 N   MSE A 295     1555   1555  1.33  
LINK         C   MSE A 295                 N   PRO A 296     1555   1555  1.36  
CISPEP   1 ALA A  135    PRO A  136          0         9.20                     
SITE     1 AC1  7 GLY A  95  ALA A  97  CYS A  98  VAL A 115                    
SITE     2 AC1  7 GLU A 117  LEU A 122  SER A 126                               
CRYST1   52.909   65.009   87.308  90.00  90.00  90.00 P 21 21 21    4          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      0.018900  0.000000  0.000000        0.00000                         
SCALE2      0.000000  0.015382  0.000000        0.00000                         
SCALE3      0.000000  0.000000  0.011454        0.00000                         
(ATOM LINES ARE NOT SHOWN.)
END                                                                             
DBGET integrated database retrieval system