HEADER HYDROLASE 12-FEB-15 5AI4
TITLE LIGAND COMPLEX STRUCTURE OF SOLUBLE EPOXIDE HYDROLASE
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: BIFUNCTIONAL EPOXIDE HYDROLASE 2;
COMPND 3 CHAIN: A;
COMPND 4 SYNONYM: SOLUBLE EPOXIDE HYDROLASE, SEH;
COMPND 5 ENGINEERED: YES
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;
SOURCE 3 ORGANISM_COMMON: HUMAN;
SOURCE 4 ORGANISM_TAXID: 9606;
SOURCE 5 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA;
SOURCE 6 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM;
SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7108;
SOURCE 8 EXPRESSION_SYSTEM_CELL_LINE: SF9;
SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: BACULOVIRUS
KEYWDS HYDROLASE
EXPDTA X-RAY DIFFRACTION
AUTHOR L.OSTER,S.TAPANI,Y.XUE,H.KACK
REVDAT 4 10-JAN-24 5AI4 1 REMARK
REVDAT 3 24-FEB-21 5AI4 1 REMARK
REVDAT 2 23-SEP-15 5AI4 1 JRNL
REVDAT 1 13-MAY-15 5AI4 0
JRNL AUTH L.OSTER,S.TAPANI,Y.XUE,H.KACK
JRNL TITL SUCCESSFUL GENERATION OF STRUCTURAL INFORMATION FOR
JRNL TITL 2 FRAGMENT-BASED DRUG DISCOVERY.
JRNL REF DRUG DISCOV TODAY V. 20 1104 2015
JRNL REFN ISSN 1359-6446
JRNL PMID 25931264
JRNL DOI 10.1016/J.DRUDIS.2015.04.005
REMARK 2
REMARK 2 RESOLUTION. 1.93 ANGSTROMS.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : BUSTER 2.11.1
REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER,
REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN,
REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD
REMARK 3
REMARK 3 DATA USED IN REFINEMENT.
REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.93
REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 80.09
REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000
REMARK 3 COMPLETENESS FOR RANGE (%) : NULL
REMARK 3 NUMBER OF REFLECTIONS : 47255
REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT.
REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT
REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM
REMARK 3 R VALUE (WORKING + TEST SET) : NULL
REMARK 3 R VALUE (WORKING SET) : 0.181
REMARK 3 FREE R VALUE : 0.208
REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.050
REMARK 3 FREE R VALUE TEST SET COUNT : 2387
REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL
REMARK 3
REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN.
REMARK 3 TOTAL NUMBER OF BINS USED : NULL
REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : NULL
REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : NULL
REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL
REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : NULL
REMARK 3 BIN R VALUE (WORKING + TEST SET) : NULL
REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL
REMARK 3 BIN R VALUE (WORKING SET) : NULL
REMARK 3 BIN FREE R VALUE : NULL
REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL
REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL
REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL
REMARK 3
REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.
REMARK 3 PROTEIN ATOMS : 4324
REMARK 3 NUCLEIC ACID ATOMS : 0
REMARK 3 HETEROGEN ATOMS : 54
REMARK 3 SOLVENT ATOMS : 487
REMARK 3
REMARK 3 B VALUES.
REMARK 3 FROM WILSON PLOT (A**2) : 29.36
REMARK 3 MEAN B VALUE (OVERALL, A**2) : 32.58
REMARK 3 OVERALL ANISOTROPIC B VALUE.
REMARK 3 B11 (A**2) : 1.04840
REMARK 3 B22 (A**2) : 1.04840
REMARK 3 B33 (A**2) : -2.09690
REMARK 3 B12 (A**2) : 0.00000
REMARK 3 B13 (A**2) : 0.00000
REMARK 3 B23 (A**2) : 0.00000
REMARK 3
REMARK 3 ESTIMATED COORDINATE ERROR.
REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL
REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : NULL
REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : NULL
REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : NULL
REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : NULL
REMARK 3
REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797
REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601
REMARK 3
REMARK 3 CORRELATION COEFFICIENTS.
REMARK 3 CORRELATION COEFFICIENT FO-FC : NULL
REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : NULL
REMARK 3
REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15
REMARK 3 TERM COUNT WEIGHT FUNCTION.
REMARK 3 BOND LENGTHS : NULL ; NULL ; NULL
REMARK 3 BOND ANGLES : NULL ; NULL ; NULL
REMARK 3 TORSION ANGLES : NULL ; NULL ; NULL
REMARK 3 TRIGONAL CARBON PLANES : NULL ; NULL ; NULL
REMARK 3 GENERAL PLANES : NULL ; NULL ; NULL
REMARK 3 ISOTROPIC THERMAL FACTORS : NULL ; NULL ; NULL
REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL
REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL
REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL
REMARK 3 CHIRAL IMPROPER TORSION : NULL ; NULL ; NULL
REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL
REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL
REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL
REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL
REMARK 3 IDEAL-DIST CONTACT TERM : NULL ; NULL ; NULL
REMARK 3
REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES.
REMARK 3 BOND LENGTHS (A) : NULL
REMARK 3 BOND ANGLES (DEGREES) : NULL
REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : NULL
REMARK 3 OTHER TORSION ANGLES (DEGREES) : NULL
REMARK 3
REMARK 3 TLS DETAILS
REMARK 3 NUMBER OF TLS GROUPS : NULL
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4
REMARK 4 5AI4 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 12-FEB-15.
REMARK 100 THE DEPOSITION ID IS D_1290063024.
REMARK 200
REMARK 200 EXPERIMENTAL DETAILS
REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION
REMARK 200 DATE OF DATA COLLECTION : NULL
REMARK 200 TEMPERATURE (KELVIN) : 100
REMARK 200 PH : NULL
REMARK 200 NUMBER OF CRYSTALS USED : NULL
REMARK 200
REMARK 200 SYNCHROTRON (Y/N) : Y
REMARK 200 RADIATION SOURCE : ESRF
REMARK 200 BEAMLINE : ID23-1
REMARK 200 X-RAY GENERATOR MODEL : NULL
REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M
REMARK 200 WAVELENGTH OR RANGE (A) : 0.992
REMARK 200 MONOCHROMATOR : NULL
REMARK 200 OPTICS : NULL
REMARK 200
REMARK 200 DETECTOR TYPE : CCD
REMARK 200 DETECTOR MANUFACTURER : ADSC CCD
REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS
REMARK 200 DATA SCALING SOFTWARE : SCALA
REMARK 200
REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 47371
REMARK 200 RESOLUTION RANGE HIGH (A) : 1.930
REMARK 200 RESOLUTION RANGE LOW (A) : 244.440
REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000
REMARK 200
REMARK 200 OVERALL.
REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7
REMARK 200 DATA REDUNDANCY : 9.500
REMARK 200 R MERGE (I) : 0.16000
REMARK 200 R SYM (I) : NULL
REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 11.2000
REMARK 200
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.93
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.03
REMARK 200 COMPLETENESS FOR SHELL (%) : 99.3
REMARK 200 DATA REDUNDANCY IN SHELL : 9.80
REMARK 200 R MERGE FOR SHELL (I) : 0.96000
REMARK 200 R SYM FOR SHELL (I) : NULL
REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.700
REMARK 200
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT
REMARK 200 SOFTWARE USED: NULL
REMARK 200 STARTING MODEL: PDB ENTRY 5AHX
REMARK 200
REMARK 200 REMARK: NONE
REMARK 280
REMARK 280 CRYSTAL
REMARK 280 SOLVENT CONTENT, VS (%): 49.56
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.44
REMARK 280
REMARK 280 CRYSTALLIZATION CONDITIONS: NULL
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 2 2
REMARK 290
REMARK 290 SYMOP SYMMETRY
REMARK 290 NNNMMM OPERATOR
REMARK 290 1555 X,Y,Z
REMARK 290 2555 -Y,X-Y,Z+2/3
REMARK 290 3555 -X+Y,-X,Z+1/3
REMARK 290 4555 -X,-Y,Z+1/2
REMARK 290 5555 Y,-X+Y,Z+1/6
REMARK 290 6555 X-Y,X,Z+5/6
REMARK 290 7555 Y,X,-Z+2/3
REMARK 290 8555 X-Y,-Y,-Z
REMARK 290 9555 -X,-X+Y,-Z+1/3
REMARK 290 10555 -Y,-X,-Z+1/6
REMARK 290 11555 -X+Y,Y,-Z+1/2
REMARK 290 12555 X,X-Y,-Z+5/6
REMARK 290
REMARK 290 WHERE NNN -> OPERATOR NUMBER
REMARK 290 MMM -> TRANSLATION VECTOR
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY
REMARK 290 RELATED MOLECULES.
REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 2 -0.500040 -0.866009 0.000000 0.00000
REMARK 290 SMTRY2 2 0.866042 -0.499960 0.000000 0.00000
REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 162.95934
REMARK 290 SMTRY1 3 -0.499960 0.866009 0.000000 0.00000
REMARK 290 SMTRY2 3 -0.866042 -0.500040 0.000000 0.00000
REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 81.47967
REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000
REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 122.21951
REMARK 290 SMTRY1 5 0.500040 0.866009 0.000000 0.00000
REMARK 290 SMTRY2 5 -0.866042 0.499960 0.000000 0.00000
REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 40.73984
REMARK 290 SMTRY1 6 0.499960 -0.866009 0.000000 0.00000
REMARK 290 SMTRY2 6 0.866042 0.500040 0.000000 0.00000
REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 203.69918
REMARK 290 SMTRY1 7 -0.500040 0.865962 0.000000 0.00000
REMARK 290 SMTRY2 7 0.866042 0.500040 0.000000 0.00000
REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 162.95934
REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000
REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000
REMARK 290 SMTRY1 9 -0.499960 -0.866056 0.000000 0.00000
REMARK 290 SMTRY2 9 -0.866042 0.499960 0.000000 0.00000
REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 81.47967
REMARK 290 SMTRY1 10 0.500040 -0.865962 0.000000 0.00000
REMARK 290 SMTRY2 10 -0.866042 -0.500040 0.000000 0.00000
REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 40.73984
REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 122.21951
REMARK 290 SMTRY1 12 0.499960 0.866056 0.000000 0.00000
REMARK 290 SMTRY2 12 0.866042 -0.499960 0.000000 0.00000
REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 203.69918
REMARK 290
REMARK 290 REMARK: NULL
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC
REMARK 350 SOFTWARE USED: PISA
REMARK 350 TOTAL BURIED SURFACE AREA: 7420 ANGSTROM**2
REMARK 350 SURFACE AREA OF THE COMPLEX: 42630 ANGSTROM**2
REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 9.0 KCAL/MOL
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 350 BIOMT1 2 0.500040 -0.865962 0.000000 46.64237
REMARK 350 BIOMT2 2 -0.866042 -0.500040 0.000000 80.79502
REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 40.73984
REMARK 465
REMARK 465 MISSING RESIDUES
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)
REMARK 465
REMARK 465 M RES C SSSEQI
REMARK 465 GLY A 0
REMARK 465 MET A 1
REMARK 470
REMARK 470 MISSING ATOM
REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER;
REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER;
REMARK 470 I=INSERTION CODE):
REMARK 470 M RES CSSEQI ATOMS
REMARK 470 ASN A 548 CA C O CB CG OD1 ND2
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT
REMARK 500
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.
REMARK 500
REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE
REMARK 500 OD1 ASP A 207 O HOH A 2208 1.98
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: CLOSE CONTACTS
REMARK 500
REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC
REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15
REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A
REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375
REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE
REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS.
REMARK 500
REMARK 500 DISTANCE CUTOFF:
REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS
REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS
REMARK 500
REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE
REMARK 500 O HOH A 2052 O HOH A 2314 10665 1.60
REMARK 500 O HOH A 2064 O HOH A 2183 10665 2.13
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 LEU A 10 -68.72 -92.71
REMARK 500 VAL A 13 -72.28 -120.04
REMARK 500 GLN A 204 -84.75 -111.54
REMARK 500 GLU A 269 -144.33 -113.71
REMARK 500 ASP A 335 -124.66 61.81
REMARK 500 ASN A 359 -44.01 72.86
REMARK 500 MET A 419 -21.93 85.41
REMARK 500 ARG A 547 -111.09 91.60
REMARK 500
REMARK 500 REMARK: NULL
REMARK 525
REMARK 525 SOLVENT
REMARK 525
REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT
REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST
REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT
REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE
REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER;
REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE
REMARK 525 NUMBER; I=INSERTION CODE):
REMARK 525
REMARK 525 M RES CSSEQI
REMARK 525 HOH A2088 DISTANCE = 6.09 ANGSTROMS
REMARK 525 HOH A2137 DISTANCE = 6.09 ANGSTROMS
REMARK 525 HOH A2197 DISTANCE = 6.44 ANGSTROMS
REMARK 525 HOH A2486 DISTANCE = 7.18 ANGSTROMS
REMARK 525 HOH A2487 DISTANCE = 8.62 ANGSTROMS
REMARK 800
REMARK 800 SITE
REMARK 800 SITE_IDENTIFIER: AC1
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DMS A 1548
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC2
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DMS A 1549
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC3
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DMS A 1550
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC4
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DMS A 1551
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC5
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DMS A 1552
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC6
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DMS A 1553
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC7
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1554
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC8
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 4VY A 1555
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC9
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 4VY A 1556
REMARK 900
REMARK 900 RELATED ENTRIES
REMARK 900 RELATED ID: 5AHX RELATED DB: PDB
REMARK 900 APO STRUCTURE OF SOLUBLE EPOXIDE HYDROLASE
REMARK 900 RELATED ID: 5AI0 RELATED DB: PDB
REMARK 900 LIGAND COMPLEX STRUCTURE OF SOLUBLE EPOXIDE HYDROLASE
REMARK 900 RELATED ID: 5AI5 RELATED DB: PDB
REMARK 900 LIGAND COMPLEX STRUCTURE OF SOLUBLE EPOXIDE HYDROLASE
REMARK 900 RELATED ID: 5AI6 RELATED DB: PDB
REMARK 900 LIGAND COMPLEX STRUCTURE OF SOLUBLE EPOXIDE HYDROLASE
REMARK 900 RELATED ID: 5AI8 RELATED DB: PDB
REMARK 900 LIGAND COMPLEX STRUCTURE OF SOLUBLE EPOXIDE HYDROLASE
REMARK 900 RELATED ID: 5AI9 RELATED DB: PDB
REMARK 900 LIGAND COMPLEX STRUCTURE OF SOLUBLE EPOXIDE HYDROLASE
REMARK 900 RELATED ID: 5AIA RELATED DB: PDB
REMARK 900 LIGAND COMPLEX STRUCTURE OF SOLUBLE EPOXIDE HYDROLASE
REMARK 900 RELATED ID: 5AIB RELATED DB: PDB
REMARK 900 LIGAND COMPLEX STRUCTURE OF SOLUBLE EPOXIDE HYDROLASE
REMARK 900 RELATED ID: 5AIC RELATED DB: PDB
REMARK 900 LIGAND COMPLEX STRUCTURE OF SOLUBLE EPOXIDE HYDROLASE
DBREF 5AI4 A 1 548 UNP P34913 HYES_HUMAN 1 548
SEQADV 5AI4 GLY A 0 UNP P34913 EXPRESSION TAG
SEQRES 1 A 549 GLY MET THR LEU ARG ALA ALA VAL PHE ASP LEU ASP GLY
SEQRES 2 A 549 VAL LEU ALA LEU PRO ALA VAL PHE GLY VAL LEU GLY ARG
SEQRES 3 A 549 THR GLU GLU ALA LEU ALA LEU PRO ARG GLY LEU LEU ASN
SEQRES 4 A 549 ASP ALA PHE GLN LYS GLY GLY PRO GLU GLY ALA THR THR
SEQRES 5 A 549 ARG LEU MET LYS GLY GLU ILE THR LEU SER GLN TRP ILE
SEQRES 6 A 549 PRO LEU MET GLU GLU ASN CYS ARG LYS CYS SER GLU THR
SEQRES 7 A 549 ALA LYS VAL CYS LEU PRO LYS ASN PHE SER ILE LYS GLU
SEQRES 8 A 549 ILE PHE ASP LYS ALA ILE SER ALA ARG LYS ILE ASN ARG
SEQRES 9 A 549 PRO MET LEU GLN ALA ALA LEU MET LEU ARG LYS LYS GLY
SEQRES 10 A 549 PHE THR THR ALA ILE LEU THR ASN THR TRP LEU ASP ASP
SEQRES 11 A 549 ARG ALA GLU ARG ASP GLY LEU ALA GLN LEU MET CYS GLU
SEQRES 12 A 549 LEU LYS MET HIS PHE ASP PHE LEU ILE GLU SER CYS GLN
SEQRES 13 A 549 VAL GLY MET VAL LYS PRO GLU PRO GLN ILE TYR LYS PHE
SEQRES 14 A 549 LEU LEU ASP THR LEU LYS ALA SER PRO SER GLU VAL VAL
SEQRES 15 A 549 PHE LEU ASP ASP ILE GLY ALA ASN LEU LYS PRO ALA ARG
SEQRES 16 A 549 ASP LEU GLY MET VAL THR ILE LEU VAL GLN ASP THR ASP
SEQRES 17 A 549 THR ALA LEU LYS GLU LEU GLU LYS VAL THR GLY ILE GLN
SEQRES 18 A 549 LEU LEU ASN THR PRO ALA PRO LEU PRO THR SER CYS ASN
SEQRES 19 A 549 PRO SER ASP MET SER HIS GLY TYR VAL THR VAL LYS PRO
SEQRES 20 A 549 ARG VAL ARG LEU HIS PHE VAL GLU LEU GLY SER GLY PRO
SEQRES 21 A 549 ALA VAL CYS LEU CYS HIS GLY PHE PRO GLU SER TRP TYR
SEQRES 22 A 549 SER TRP ARG TYR GLN ILE PRO ALA LEU ALA GLN ALA GLY
SEQRES 23 A 549 TYR ARG VAL LEU ALA MET ASP MET LYS GLY TYR GLY GLU
SEQRES 24 A 549 SER SER ALA PRO PRO GLU ILE GLU GLU TYR CYS MET GLU
SEQRES 25 A 549 VAL LEU CYS LYS GLU MET VAL THR PHE LEU ASP LYS LEU
SEQRES 26 A 549 GLY LEU SER GLN ALA VAL PHE ILE GLY HIS ASP TRP GLY
SEQRES 27 A 549 GLY MET LEU VAL TRP TYR MET ALA LEU PHE TYR PRO GLU
SEQRES 28 A 549 ARG VAL ARG ALA VAL ALA SER LEU ASN THR PRO PHE ILE
SEQRES 29 A 549 PRO ALA ASN PRO ASN MET SER PRO LEU GLU SER ILE LYS
SEQRES 30 A 549 ALA ASN PRO VAL PHE ASP TYR GLN LEU TYR PHE GLN GLU
SEQRES 31 A 549 PRO GLY VAL ALA GLU ALA GLU LEU GLU GLN ASN LEU SER
SEQRES 32 A 549 ARG THR PHE LYS SER LEU PHE ARG ALA SER ASP GLU SER
SEQRES 33 A 549 VAL LEU SER MET HIS LYS VAL CYS GLU ALA GLY GLY LEU
SEQRES 34 A 549 PHE VAL ASN SER PRO GLU GLU PRO SER LEU SER ARG MET
SEQRES 35 A 549 VAL THR GLU GLU GLU ILE GLN PHE TYR VAL GLN GLN PHE
SEQRES 36 A 549 LYS LYS SER GLY PHE ARG GLY PRO LEU ASN TRP TYR ARG
SEQRES 37 A 549 ASN MET GLU ARG ASN TRP LYS TRP ALA CYS LYS SER LEU
SEQRES 38 A 549 GLY ARG LYS ILE LEU ILE PRO ALA LEU MET VAL THR ALA
SEQRES 39 A 549 GLU LYS ASP PHE VAL LEU VAL PRO GLN MET SER GLN HIS
SEQRES 40 A 549 MET GLU ASP TRP ILE PRO HIS LEU LYS ARG GLY HIS ILE
SEQRES 41 A 549 GLU ASP CYS GLY HIS TRP THR GLN MET ASP LYS PRO THR
SEQRES 42 A 549 GLU VAL ASN GLN ILE LEU ILE LYS TRP LEU ASP SER ASP
SEQRES 43 A 549 ALA ARG ASN
HET DMS A1548 4
HET DMS A1549 4
HET DMS A1550 4
HET DMS A1551 4
HET DMS A1552 4
HET DMS A1553 4
HET GOL A1554 6
HET 4VY A1555 12
HET 4VY A1556 12
HETNAM DMS DIMETHYL SULFOXIDE
HETNAM GOL GLYCEROL
HETNAM 4VY 2-[(5-BROMO-2-PYRIDYL)-METHYL-AMINO]ETHANOL
HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL
FORMUL 2 DMS 6(C2 H6 O S)
FORMUL 8 GOL C3 H8 O3
FORMUL 9 4VY 2(C8 H11 BR N2 O)
FORMUL 11 HOH *487(H2 O)
HELIX 1 1 GLY A 21 LEU A 30 1 10
HELIX 2 2 GLY A 35 GLN A 42 1 8
HELIX 3 3 GLY A 44 GLU A 47 5 4
HELIX 4 4 GLY A 48 LYS A 55 1 8
HELIX 5 5 THR A 59 LYS A 79 1 21
HELIX 6 6 SER A 87 ARG A 99 1 13
HELIX 7 7 ASN A 102 LYS A 115 1 14
HELIX 8 8 ARG A 133 MET A 145 1 13
HELIX 9 9 SER A 153 GLY A 157 1 5
HELIX 10 10 GLU A 162 LYS A 174 1 13
HELIX 11 11 SER A 176 SER A 178 5 3
HELIX 12 12 ILE A 186 LEU A 196 1 11
HELIX 13 13 ASP A 205 GLY A 218 1 14
HELIX 14 14 ASN A 233 MET A 237 5 5
HELIX 15 15 SER A 270 ARG A 275 5 6
HELIX 16 16 GLN A 277 ALA A 284 1 8
HELIX 17 17 GLU A 304 TYR A 308 5 5
HELIX 18 18 CYS A 309 GLY A 325 1 17
HELIX 19 19 ASP A 335 TYR A 348 1 14
HELIX 20 20 SER A 370 ASN A 378 1 9
HELIX 21 21 PHE A 381 PHE A 387 1 7
HELIX 22 22 GLY A 391 GLN A 399 1 9
HELIX 23 23 ASN A 400 PHE A 409 1 10
HELIX 24 24 LYS A 421 GLY A 426 1 6
HELIX 25 25 THR A 443 LYS A 456 1 14
HELIX 26 26 PHE A 459 TRP A 465 1 7
HELIX 27 27 ASN A 468 CYS A 477 1 10
HELIX 28 28 LYS A 478 LEU A 480 5 3
HELIX 29 29 VAL A 500 GLN A 505 5 6
HELIX 30 30 HIS A 506 TRP A 510 5 5
HELIX 31 31 TRP A 525 LYS A 530 1 6
HELIX 32 32 LYS A 530 ALA A 546 1 17
SHEET 1 AA 5 PHE A 149 GLU A 152 0
SHEET 2 AA 5 THR A 118 THR A 123 1 O THR A 119 N PHE A 149
SHEET 3 AA 5 ALA A 5 PHE A 8 1 O ALA A 6 N ALA A 120
SHEET 4 AA 5 VAL A 180 ASP A 184 1 O VAL A 181 N VAL A 7
SHEET 5 AA 5 VAL A 199 LEU A 202 1 O VAL A 199 N PHE A 182
SHEET 1 AB 2 ALA A 15 LEU A 16 0
SHEET 2 AB 2 LYS A 100 ILE A 101 -1 O LYS A 100 N LEU A 16
SHEET 1 AC 8 SER A 238 LYS A 245 0
SHEET 2 AC 8 VAL A 248 LEU A 255 -1 O VAL A 248 N VAL A 244
SHEET 3 AC 8 ARG A 287 ASP A 292 -1 O VAL A 288 N LEU A 255
SHEET 4 AC 8 ALA A 260 CYS A 264 1 O VAL A 261 N LEU A 289
SHEET 5 AC 8 ALA A 329 HIS A 334 1 O VAL A 330 N CYS A 262
SHEET 6 AC 8 VAL A 352 LEU A 358 1 N ARG A 353 O ALA A 329
SHEET 7 AC 8 ALA A 488 ALA A 493 1 O LEU A 489 N SER A 357
SHEET 8 AC 8 LYS A 515 ILE A 519 1 O LYS A 515 N MET A 490
CISPEP 1 LEU A 16 PRO A 17 0 -7.68
CISPEP 2 LYS A 160 PRO A 161 0 10.92
CISPEP 3 PHE A 267 PRO A 268 0 -7.65
SITE 1 AC1 6 LEU A 228 ARG A 440 MET A 441 THR A 443
SITE 2 AC1 6 HOH A2278 HOH A2279
SITE 1 AC2 5 LYS A 144 PHE A 147 PHE A 149 LEU A 150
SITE 2 AC2 5 HOH A2146
SITE 1 AC3 4 ARG A 249 SER A 300 LYS A 456 HOH A2296
SITE 1 AC4 8 ASP A 207 ASN A 223 GLU A 398 SER A 457
SITE 2 AC4 8 HOH A2115 HOH A2362 HOH A2363 HOH A2400
SITE 1 AC5 7 PRO A 361 ILE A 363 LEU A 499 MET A 503
SITE 2 AC5 7 4VY A1555 HOH A2333 HOH A2483
SITE 1 AC6 4 ARG A 4 LYS A 115 GLY A 116 PHE A 117
SITE 1 AC7 8 MET A 310 TYR A 343 MET A 469 ASN A 472
SITE 2 AC7 8 4VY A1555 HOH A2335 HOH A2410 HOH A2484
SITE 1 AC8 10 ASP A 335 TRP A 336 MET A 339 TYR A 383
SITE 2 AC8 10 GLN A 384 TYR A 466 MET A 469 DMS A1552
SITE 3 AC8 10 GOL A1554 4VY A1556
SITE 1 AC9 11 PHE A 267 ASP A 335 TYR A 383 LEU A 408
SITE 2 AC9 11 MET A 419 TYR A 466 HIS A 524 TRP A 525
SITE 3 AC9 11 4VY A1555 HOH A2348 HOH A2485
CRYST1 92.482 92.482 244.934 90.00 90.00 120.00 P 65 2 2 12
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.010719 0.006189 0.000000 0.00000
SCALE2 0.000000 0.012377 0.000000 0.00000
SCALE3 0.000000 0.000000 0.004091 0.00000
(ATOM LINES ARE NOT SHOWN.)
END
