KEGG T00440: Pden

Paracoccus denitrificans: Pden_0555

Entry

Pden_0555 CDS T00440

Gene name

sucA

Definition

2-oxoglutarate dehydrogenase E1

Orthology

K00164

2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]

Organism

pde Paracoccus denitrificans

Pathway

pde00020	Citrate cycle (TCA cycle)
pde00310	Lysine degradation
pde00380	Tryptophan metabolism
pde01100	Metabolic pathways
pde01110	Biosynthesis of secondary metabolites
pde01120	Microbial metabolism in diverse environments

Module

pde_M00009	Citrate cycle (TCA cycle, Krebs cycle)
pde_M00011	Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate

Class

Metabolism; Carbohydrate metabolism; Citrate cycle (TCA cycle) [PATH:pde00020]
Metabolism; Amino acid metabolism; Lysine degradation [PATH:pde00310]
Metabolism; Amino acid metabolism; Tryptophan metabolism [PATH:pde00380]

SSDB

Motif

Pfam:

Transket_pyr E1_dh

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

1:complement(526971..529937)

AA seq 988 aa
MNDQSPNSAFHDSSFLQGHNAAYVEQLYGQWAQNPAAVDQAWDAFFRSLGDDEAVVTREA
KGASWHRADWPPVPADDTTAALTGEWPMLPKTEAKAALDKIAAKAGEKGVNLTDDQLKRA
VLDSVRAIMLIRAFRIRGHLHADLDPLGMREIPDHGELDPKTYGFSEADLDRPIFIDNVL
GLQIATIRQIVDLMSRTYCGTFALQFMHISNPEEAAWLKERIEGYGKEIAFTREGRRAIL
NKLVEAEGFEKFLHVKYMGTKRFGLDGGEALIPAMEQIIKRGGALGVKDVVIGMPHRGRL
SVLANVMGKPYRAIFHEFQGGSYKPDDVDGSGDVKYHLGASSDRTFDDNTVHLSLTANPS
HLEAVNPVVLGKVRAKQDQLSDHTHRTAVLPILLHGDAAFAGQGIVAECFQLSGIKGHRT
GGCIHIVVNNQIGFTTAPHFSRTSPYPTDIALMVEAPIFHVNGDDPEAVVHAARVATEFR
QKFHKDVVIDIFCYRRFGHNEGDEPMFTNPAMYKAIKGHKTTLQRYTERLVADGLVPEGE
IEEMKAAFQSHLNEEFEVGKNFKPNKADWLDGKWSGIEAEHAEENLGQTGIAPETMAEIG
SALTRVPEGFDLHRTVGRLLESKKQMFETGKGFDWATGEALAFGSLLVEGHPVRLAGQDS
TRGTFSQRHSAFVDQATEERCYPLNHIRGGQARYEVIDSMLSEYAVLGFEYGYSLAEPNS
LVMWEAQFGDFANGAQIMFDQFITSGEKKWLRMSGLVMLMPHGYEGQGPEHSSARLERWL
QMCAEDNWIVANCTTPANYFHILRRQLKRPFRKPLVLMTPKSLLRHPLAVSTADEFLTGS
TFNRVLVDDADRGKSEFKLAPDDKIRRVVICSGKVYYDLAQARDAAGAEDVYILRLEQFY
PFPAQTMSKELERFKDAEIVWCQEEPKNQGGWTFVEPNIEWVLSRIGAKHGRPRYVGRHA
AASPATGLASRHKAEQEALVHEAITIGA

NT seq 2967 nt +upstreamnt +downstreamnt
atgaacgatcaatcccccaactcggccttccacgattcaagcttcctgcaaggccataac
gcggcctatgtcgagcagctttatggccaatgggcccagaaccccgcggcggtcgatcag
gcgtgggacgccttcttccgcagcctgggcgatgacgaggccgtggtcacccgcgaggcc
aagggcgcaagctggcatcgtgccgactggccgccggtgcccgcggacgacaccaccgcg
gcgctgaccggcgaatggccgatgctgcccaagaccgaggccaaggctgcactggacaag
atcgccgccaaggccggcgaaaagggcgtgaacctgacggacgatcagctcaagcgcgcc
gtgctggacagcgtccgcgccatcatgctgatccgcgccttccgcatccgcggccacctg
catgccgacctggacccgctgggcatgcgcgagatccccgaccacggcgagctggacccc
aagacctatggcttctccgaggccgatctggaccggccgatcttcatcgacaacgtgctt
ggcctgcagatcgccacgatccgccagatcgtggacctgatgagccgcacctattgcggc
accttcgcgctgcaattcatgcatatctcgaaccccgaggaagccgcctggctcaaggag
cggatcgagggctacggcaaggagatcgcctttacccgcgaggggcgccgcgccatcctg
aacaagctggtcgaggccgagggcttcgaaaagttcctgcatgtcaaatacatgggcacc
aagcgcttcggccttgacggcggcgaggcgctgatcccggcgatggagcagatcatcaag
cgcggcggcgcgcttggcgtcaaggacgtggtgatcggcatgccgcatcgcggccgcctc
tcggtcttggccaacgtcatgggcaagccctatcgcgccatcttccacgaattccagggc
ggcagctacaagcccgacgacgtggacgggtcgggcgacgtgaaataccacctcggcgcc
tcgtcggaccgcaccttcgacgacaataccgtgcacctgtccctgactgcgaacccctcg
cacctcgaggccgtgaacccggtggtgctgggcaaggtccgcgccaagcaggaccagctt
tccgaccacacccaccgcacggcagtgctgccgatcctgctgcatggcgacgcggccttt
gccggccaggggatcgtggcggaatgcttccagctttccggcatcaagggtcaccgcacc
ggcggctgcatccatatcgtggtgaacaaccagatcggctttaccaccgcgccgcatttc
agccgcacctcgccctatccgaccgacatcgcgctgatggtcgaggcgccgatcttccac
gtcaacggcgacgaccccgaggcggtggtgcacgccgcccgcgtcgcgaccgagttccgg
caaaagttccacaaggacgtggtcatcgacatcttctgctatcgccgcttcggtcacaac
gaaggcgacgagccgatgttcaccaacccggcgatgtacaaggcgatcaagggccacaag
accacgctgcaacgctataccgagcggctggtcgccgacgggctggtccccgagggcgag
atcgaggagatgaaggccgccttccagtcgcacctgaacgaagagttcgaggtcggcaaa
aacttcaagccgaacaaggccgactggctggacggcaagtggtcggggatcgaggccgag
catgccgaggaaaacctgggccagaccggcatcgcgcccgagaccatggccgagatcggc
agcgcgctgacccgggtgcccgaaggcttcgacctgcacaggaccgtgggccggctgctg
gaatccaagaagcagatgttcgagaccggcaagggcttcgactgggcgacgggcgaggcg
ctggccttcggctcgctgctggtcgagggtcatccggtgcggctggccggccaggattcg
acccgcggcaccttctcgcagcgccattccgcctttgtcgatcaggccaccgaggaacgc
tgctacccgctgaaccacatccgcggcgggcaggcgcgctacgaagtcatcgactcgatg
ctgtcggaatatgcggttctgggcttcgaatacggctattcgctggccgagccgaacagc
ctggtcatgtgggaagcccagttcggcgatttcgccaacggcgcccagatcatgttcgac
cagttcatcacctcgggcgaaaagaaatggctgcgcatgtccggcctcgtcatgctgatg
ccgcacggttacgagggccagggcccggagcacagctcggcccggctggaacgctggcta
cagatgtgcgccgaggacaactggatcgtggcgaactgcaccacgccggcgaactatttc
cacatcctgcgccggcagctcaagcgacccttccgcaagccgctggtgctgatgacgccg
aaatcgctgctgcgccacccgctggccgtgtccacggcggacgagttcctgaccggctcg
accttcaaccgggtgctggtggacgatgccgaccgcggcaagtccgagttcaagctggcc
ccggacgacaagatccgccgcgtggtgatctgctcgggcaaggtctattacgacctcgcg
caggcccgcgacgcggccggcgccgaggatgtctatatcctgcggctggagcaattctat
cccttcccggcccagaccatgtccaaggagctggaacgcttcaaggacgccgagatcgtc
tggtgccaggaggaacccaagaatcagggcggctggaccttcgtcgagcccaatatcgaa
tgggttctgtcgcgcatcggcgccaagcatggccggccgcgctatgtcggacgccatgcg
gcggcctcgccggccaccgggcttgcctcgcgccacaaggccgagcaagaggccctggtc
cacgaagcgatcaccatcggggcctga

All links

Pathway (8)   
   KEGG PATHWAY (6)   
   KEGG MODULE (2)   
Chemical substance (13)   
   KEGG COMPOUND (13)   
Chemical reaction (5)   
   KEGG ENZYME (1)   
   KEGG REACTION (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-PDE (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (36)   

Download RDF

DBGET integrated database retrieval system