KEGG T00440: Pden

Paracoccus denitrificans: Pden_4186

Entry

Pden_4186 CDS T00440

Definition

hypothetical protein

Orthology

K01971

DNA ligase (ATP) [EC:6.5.1.1]

Organism

pde Paracoccus denitrificans

Pathway

pde03410	Base excision repair
pde03420	Nucleotide excision repair
pde03430	Mismatch repair

Class

Genetic Information Processing; Replication and repair; Base excision repair [PATH:pde03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:pde03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:pde03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining

SSDB

Motif

Pfam:

DNA_primase_S

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

2:1341593..1342585

AA seq 330 aa
MRIGWPAANRDPAAGVGPESSKEPTMTERIEGVTISHPERVIFADAGPGKAGLTKAGLTK
ARLARYYQQIAPLMLEEAANRPLSLLRLPDGMAGERFFQKHPGKGFPKAIRQMQITESDG
EAAPYAYVTDAAGLVAAVQMGTVEFHIWPARRDRLERPDRLVLDLDPDEGLGFDAVRSAA
LSLRGRLLDLGLEPWAMLTGGKGVHLVVPLRRSLGWDDLKRFARGFAALCAQEEPDRYTV
ELAKASRRGRIFIDWLRNERGSTAVAPFSVRARPGAPVAAPIGWDELARISTARAFGIAA
AQERGWAGVTRVQQSLTRPMFEAVEKALAG

NT seq 993 nt +upstreamnt +downstreamnt
atgcggatcggatggccggcggcgaaccgcgaccccgccgccggcgttggtcccgaaagc
agcaaggagccgaccatgaccgagcggatcgagggtgtgaccatctcgcatcccgagcgg
gtgatctttgccgatgccgggccgggcaaggcggggctgaccaaggcggggctgaccaag
gcgaggctggcgcgttactaccagcagatcgcgcccctgatgctggaagaggccgcgaac
cgcccgctgtcgcttctgcgcctgcccgacgggatggcgggcgagcggttctttcagaag
catcccggcaagggctttcccaaggcgatccggcagatgcagatcaccgaaagcgacggc
gaagccgcgccctatgcctatgtcaccgatgccgcggggctggtcgccgccgtgcagatg
ggcacggtcgagttccatatctggcccgcccgccgcgaccggctggagcggcccgaccgg
ctggtcctggacctcgaccccgatgaggggctgggcttcgatgcggtgcgcagcgccgcc
ctgtcgctgcgcggccggctgctggacctggggcttgagccctgggcgatgctgaccggc
ggcaagggcgtgcatctggtggtcccgctgcgccgcagcctcggctgggacgatctcaag
cgtttcgcccgcggctttgccgcgctttgcgcgcaagaggaaccggatcgctatacggtg
gaactggccaaggccagccgcaggggccggatcttcatcgactggctgcgcaacgagcgc
ggctcgacggcggtcgcgcccttttcggtgcgcgcccggcccggcgcgccggtggcggcc
ccgatcggctgggacgaactggcccggatcagcaccgcccgcgccttcggcatcgctgcg
gcgcaagagcgcggctgggccggcgtgacgcgggtgcaacaaagcctgacccggcccatg
ttcgaggcggtggagaaggcgctggccggttga

All links

Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-PDE (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (13)   

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