KEGG   Clostridioides difficile 630Derm: CD630DERM_19740
Entry
CD630DERM_19740   CDS       T03785                                 
Symbol
hfq
Name
(GenBank) Hfq-like RNA chaperone
  KO
K03666  host factor-I protein
Organism
pdf  Clostridioides difficile 630Derm
Pathway
pdf02024  Quorum sensing
pdf03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pdf00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CD630DERM_19740 (hfq)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    CD630DERM_19740 (hfq)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pdf03019]
    CD630DERM_19740 (hfq)
   03036 Chromosome and associated proteins [BR:pdf03036]
    CD630DERM_19740 (hfq)
Messenger RNA biogenesis [BR:pdf03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     CD630DERM_19740 (hfq)
Chromosome and associated proteins [BR:pdf03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    CD630DERM_19740 (hfq)
SSDB
Motif
Pfam: Hfq LSM GON
Other DBs
NCBI-ProteinID: CEJ98548
Position
1:complement(2235695..2235955)
AA seq 86 aa
MKNTVLNLQDLFLNNARKERIPVTIYLVNGVQVKGLVKGFDSYIILIEGDNRQQNMIYKH
AVSTIQPGKYINLTNQNQNNNNNNNR
NT seq 261 nt   +upstreamnt  +downstreamnt
atgaaaaatacagttttaaatttacaagatttgtttttaaataatgcaaggaaagaaagg
atacctgttactatatatttagttaatggagtgcaagttaaagggcttgtaaaggggttt
gatagttatataatattaatagaaggggataatagacaacaaaacatgatttataaacat
gctgtatcaactatacaacctggaaagtatattaatctaacaaatcaaaaccaaaacaac
aataataataacaacagatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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