KEGG   Clostridioides difficile 630Derm: CD630DERM_25810
Entry
CD630DERM_25810   CDS       T03785                                 
Symbol
rsmB
Name
(GenBank) Ribosomal RNA small subunit methyltransferase B(rRNA (cytosine-C(5)-)-methyltransferase)
  KO
K03500  16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
Organism
pdf  Clostridioides difficile 630Derm
Brite
KEGG Orthology (KO) [BR:pdf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pdf03009]
    CD630DERM_25810 (rsmB)
Enzymes [BR:pdf01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.176  16S rRNA (cytosine967-C5)-methyltransferase
     CD630DERM_25810 (rsmB)
Ribosome biogenesis [BR:pdf03009]
 Prokaryotic type
  rRNA modification factors
   16S rRNA modification factors
    CD630DERM_25810 (rsmB)
SSDB
Motif
Pfam: Methyltr_RsmB-F NusB Methyltransf_31 Methyltr_RsmF_N FtsJ Ubie_methyltran Methyltransf_25 BMT5-like PDH_N NSUN5_fdxn-like Methyltransf_4 Methyltransf_12
Other DBs
NCBI-ProteinID: CEJ99207
Position
1:complement(2942933..2944258)
AA seq 441 aa
MDAREVGFKVLCDIEKNDNYSNIAINKHFKNLEISDMDRGLATELIYGVIENKYYLDYII
NKLSKIKVKKMSTYVKIFLRMGTYQILFLDSISDYAAVNETVKLSKKYDKKSSGFINAIL
RNEIRAKETIMDITEEDSVKYLSIKYSYNSWIIKNWIDKFGQEFAEDLLEANNEKPSIYI
RTNTLKISREELIEKLSEMGIVCLKVPMVEEAIKVEKMKNIEKNELFKAGLFTIQDISSM
IVGKVINPKEGSFVLDVCSAPGGKSTHLATLMNNTGQVVARDIFEHKLKLINSTVNRLGL
KNVFVERFDASEIDENSISKFDYVLADVPCSGFGIIRRKPEIKYKKEEELKDITSIQKKI
LENASKYVKVGGTLVYSTCTIQDVENINIVTFFVEENHNFEFVPIDTVNVDLDNQDKGYL
KIYPNIHGIDGFFIAKLKRIR
NT seq 1326 nt   +upstreamnt  +downstreamnt
atggatgcaagagaagttggatttaaagtattatgtgatatagaaaaaaatgacaattat
tcaaatattgcaataaataagcattttaaaaatttagaaataagtgatatggatagagga
cttgcaacagagttaatttatggagtaatagaaaataaatattatttagattatataatc
aataaactttcaaaaataaaggtaaaaaaaatgtcaacttatgttaaaatctttttaaga
atgggaacatatcagattttatttttagatagtatatcagattatgcagcagttaatgaa
actgtaaaattatctaagaaatatgataaaaaatcttctggtttcataaatgctattctt
agaaatgaaataagagctaaagagactataatggacataactgaggaagatagtgtaaaa
tacttatctataaagtattcctataactcttggattataaaaaactggatagataaattt
ggacaagaatttgctgaagatttgttggaagcaaataatgaaaagcctagtatctatata
agaacgaatacacttaaaataagtagagaagaacttattgaaaaattaagtgaaatgggt
attgtatgtttaaaagttcctatggtagaagaagctattaaagtcgaaaaaatgaaaaat
atagaaaaaaatgaattatttaaggctggtttatttacaattcaagatataagttctatg
atagtagggaaagtaattaatccaaaagaaggttcatttgttttggatgtatgtagtgct
cctggagggaaatctactcacttagctactttaatgaacaatactggtcaagtagtagct
agagatatttttgagcataaactaaagcttataaactctactgtaaatagattggggctt
aaaaatgtgtttgtagaaagatttgatgcttctgagattgatgaaaatagtataagtaaa
tttgattatgttttagcagatgttccttgctctggttttggtataataagacgtaaacca
gaaattaagtataagaaagaagaagagttaaaagacatcacttctatacaaaagaaaatt
ttagaaaatgcatctaaatatgtcaaagttggtggaactttagtatatagtacatgtaca
attcaagatgtggagaatataaatatagttactttttttgttgaagaaaatcacaacttt
gaatttgttccaattgatacagtaaatgtagacttagacaatcaagataaaggatattta
aagatatatcctaatattcatggtatagatggttttttcatagcaaaattaaagagaata
aggtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (12)   
   Pfam (12)   
All databases (20)   

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