KEGG   Planococcus donghaensis: BCM40_15340
Entry
BCM40_15340       CDS       T04451                                 
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
pdg  Planococcus donghaensis
Pathway
pdg03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:pdg00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    BCM40_15340
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pdg03021]
    BCM40_15340
   03400 DNA repair and recombination proteins [BR:pdg03400]
    BCM40_15340
Enzymes [BR:pdg01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     BCM40_15340
Transcription machinery [BR:pdg03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     BCM40_15340
DNA repair and recombination proteins [BR:pdg03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      BCM40_15340
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_A_CTD RNA_pol_L HHH_5 Dockerin_1
Other DBs
NCBI-ProteinID: ANU24636
UniProt: A0A1C7ELV4
Position
174681..175625
AA seq 314 aa
MLEIEKPKIETVEIDNNAKFGKFVIEPLERGYGTTLGNSLRRILLSSLPGAAVTSIQIDG
VLHEFSTVEGVEEDVATIILNIKKLALKIYSDEEKVIEIDVKGDGTVTAADITHDSDVEI
LNPDLYIATIAKNGHLRMRMYANRGRGYARADQNKREDLPIGVIPIDSIYTPVSRVNFQV
ENTRVGQLAHFDKLSLDVWTDGSIGPKEAIALGAKIFTEHLNIFVGLTDEAQTAEIMVEK
EEDQKEKVLEMTIEELDLSVRSYNCLKRAGINTVHELASKSEDDMMKVRNLGRKSLEEVK
VKLEDLGLGLRKED
NT seq 945 nt   +upstreamnt  +downstreamnt
atgcttgaaatagaaaaaccaaagattgaaacggttgagatcgataataatgccaagttt
ggtaaatttgttattgaacctcttgagcgtggatatggaaccactttaggaaactcctta
cgtcgaatcttactttcatctttacctggcgcagctgttacttctattcaaattgatggc
gtactacacgaattctccactgttgaaggtgtagaagaagatgtagcaactattattttg
aatatcaagaagcttgctttgaaaatttactctgacgaagaaaaagtcattgaaattgat
gtaaaaggtgatggaacggttacggctgcagatatcacgcacgacagtgacgtggaaatt
ctgaatccggatctatatattgcaacaatcgctaaaaatggtcacctacgtatgcgtatg
tatgcaaacagaggccgtgggtatgctcgtgcagatcagaacaaacgtgaagatcttcca
attggcgttatcccgattgactctatttacactccagtttcacgcgttaatttccaagtg
gaaaacactcgtgtgggtcaactagctcattttgacaaattatctcttgatgtttggaca
gatggaagcattggtccgaaagaggcgattgcactaggagcaaagatttttactgagcat
ttaaatatcttcgtaggattgactgacgaggcacaaacggctgaaatcatggttgaaaaa
gaagaagaccaaaaagaaaaagtattagagatgactatcgaagaacttgatctttcggtt
cgatcttacaactgcttaaaacgtgcgggtatcaacacggtacacgaactggcaagcaag
tcagaagacgacatgatgaaagtacgcaacctcggacgcaaatcacttgaagaagttaaa
gtgaagttggaagatttaggccttggccttcgtaaagaagactga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (16)   

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