KEGG   Parabacteroides distasonis: BDI_1200
Entry
BDI_1200          CDS       T00549                                 
Name
(GenBank) endonuclease IV
  KO
K01151  deoxyribonuclease IV [EC:3.1.21.2]
Organism
pdi  Parabacteroides distasonis
Pathway
pdi03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:pdi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    BDI_1200
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pdi03400]
    BDI_1200
Enzymes [BR:pdi01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.2  deoxyribonuclease IV
     BDI_1200
DNA repair and recombination proteins [BR:pdi03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     BDI_1200
SSDB
Motif
Pfam: AP_endonuc_2
Other DBs
NCBI-ProteinID: ABR42963
UniProt: A6LB99
Position
complement(1396277..1397122)
AA seq 281 aa
MKYVGAHVSAVGGVENAPVNAHEIGAKAFALFTRNQRQWKSQPLKADSIHLFKERCEAYG
YDPGCILPHDSYLINLGNPDAEGLQKSRDAFLDEMTRCEQLGLKMLNFHPGSHLGKMEVD
TCLSRIAESINITLAQTSGVCAVIENTAGQGSNLGYTFEQIAYIINEVEDKSRVGVCLDT
AHTLAAGYDIKTPEGFAETFRHFDEVVGFSYLRGMHLNDSKKELGSRVDRHESIGKGLMG
LDTFRMIMVDPRFDNMPLILETPDEALWPEEIQLLYKQLKS
NT seq 846 nt   +upstreamnt  +downstreamnt
atgaagtatgttggggctcacgtgagtgcggtcggtggggttgagaatgcccccgttaat
gcccatgagatcggtgcgaaggcttttgcccttttcacccggaatcagaggcaatggaag
tcgcagccgttgaaggcggacagtatccatttatttaaggagcggtgtgaagcgtacggt
tacgatccgggatgtatcttgccgcacgatagctatttgatcaatctggggaacccggac
gccgagggattgcagaaatcccgtgacgcttttctggacgagatgacacgctgcgagcaa
ctgggactgaaaatgctgaatttccatcccggaagccatttggggaagatggaggtggat
acctgcctgtctcgcatcgccgagtcgatcaatatcacgttggctcagacgagtggcgta
tgtgccgtgatagagaatacggcggggcaaggctcgaacttgggatataccttcgagcag
atcgcctatattataaatgaggtagaggataagagccgggtgggagtatgcctcgatacg
gcgcacacgcttgccgccggttacgatataaagacaccggagggatttgccgagacattt
cgtcatttcgacgaggtggtcggcttttcttatttaaggggtatgcacttgaacgattct
aaaaaggagctgggatcacgtgtggaccggcatgagagtatcggtaaaggcttgatgggc
cttgataccttccgcatgatcatggtggacccccgtttcgacaatatgcccttaatccta
gagaccccggacgaggcgctttggccggaggagatacagcttctatataaacaattaaaa
tcttga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (19)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (1)   
   Pfam (1)   
All databases (28)   

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