KEGG   Parabacteroides distasonis: BDI_2088
Entry
BDI_2088          CDS       T00549                                 
Name
(GenBank) DNA polymerase III subunit gamma/tau
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
pdi  Parabacteroides distasonis
Pathway
pdi03030  DNA replication
pdi03430  Mismatch repair
pdi03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pdi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BDI_2088
   03430 Mismatch repair
    BDI_2088
   03440 Homologous recombination
    BDI_2088
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pdi03032]
    BDI_2088
   03400 DNA repair and recombination proteins [BR:pdi03400]
    BDI_2088
Enzymes [BR:pdi01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     BDI_2088
DNA replication proteins [BR:pdi03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     BDI_2088
DNA repair and recombination proteins [BR:pdi03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     BDI_2088
SSDB
Motif
Pfam: DNA_pol3_delta2 AAA DNA_pol3_gamma3 RuvB_N AAA_22 AAA_5 AAA_19 AAA_14 DNA_pol3_delta_C AAA_30 AAA_24 AAA_assoc_2 Rad17 DUF6443 AAA_2 DNA_pol3_delta Mg_chelatase AAA_16 AAA_18 QueC
Other DBs
NCBI-ProteinID: ABR43819
UniProt: A6LDQ5
Position
complement(2470376..2472136)
AA seq 586 aa
MDNYIVSARKYRPSTFRSVVGQKSLTTTLKNAIQSNKLAHAYLFCGPRGVGKTSCARIFA
KTINCLNPTADGEACNACESCRAFNEQRSYNIHELDAASNNSVDDIRTLIDQVRIPPPIG
KYKVFIIDEVHMLTTAAFNAFLKTLEEPPHHALFILATTEKHKVLPTILSRCQIYDFSRI
SIADMVEHLQYVSSQEGVTAEPEALNVIAQKADGGMRDALSIFDQVVSFTNGNITYQAVI
DNLNVLDYEYYFRLTDAILSGNVRASLLILNEILGKGFDGQNIITGLAGHFRDLLVCRDE
STLVLFEVGASIRERYKEMAKHCPDQLLFKAIELANTCDLNYRASRNKRLLLELTLIQLC
QLTQVAVDDKKKALIEPIAGTNPSSQAVNSGQPQQPPQAPSVTAAAGAPQVMSTHMPSSV
PAPPPSTAPNPARKTARPMGISMKEIGVEKPKQQTVQQATTNVKEVVTPFDNDSLVREWD
NYAATIDKKVYLKNTMINCKPTLQENYYFEVAVHNPGQQEELINNAIHILPFLRQHLNNS
RIQMRVRIVEGNEKHLAYTSTEKLELLMKINPTLGRLRDEFNLTLD
NT seq 1761 nt   +upstreamnt  +downstreamnt
atggataattatattgtatcggcaagaaaatatcgcccgtccactttccggagtgtagta
gggcagaagtctcttaccactacgctgaaaaacgcgatacaaagtaacaaattagcgcat
gcttacctgttttgcggtcctcgtggagtaggaaagacctcgtgtgcccgtatctttgcg
aagacgatcaattgcttgaatccgacggcggatggcgaggcttgcaatgcgtgcgagtcg
tgccgggctttcaatgagcagcgttcttacaatatccatgaactggatgccgcctcgaat
aactcggtggacgatatccgtaccttgatcgaccaagtgcgtatcccgcctccaatcggt
aaatacaaagtcttcattattgacgaggtccatatgttgacaaccgccgctttcaacgca
ttcttgaagacattggaggaacctccgcatcatgctctctttatcttggctacgaccgag
aagcacaaggtgcttcccacgatcctttcccgttgtcagatctatgatttctcccgtata
tccatcgccgacatggtggagcatttgcaatatgtctcttcgcaagagggggtaactgcg
gaaccggaagccttgaacgtgatcgctcagaaggcggatggaggtatgcgcgacgctttg
tctatctttgaccaagtggtaagtttcacgaatggcaatatcacgtatcaagcggttatc
gataacttgaacgtgctggattatgagtattattttcgtctgacagatgcgatcttatcc
ggcaatgtgcgggcttctttattgatcttgaatgagatattaggcaaaggattcgacggg
cagaatatcataaccggtttggctgggcatttccgggacttattggtatgccgggatgag
tccaccttggtgctattcgaggtgggagcttctatacgggaacgatataaggagatggcg
aaacattgtccggatcaacttctgttcaaggcgatagagctagcgaatacgtgcgatttg
aattaccgtgccagccgcaataagcgtcttttattggaattgacgttgattcagctctgt
caattaacacaggtggccgtcgacgataaaaaaaaagcgttaattgagccgattgctggg
acgaatccgtcttctcaagcggtgaatagcgggcagccccaacagccgcctcaagctcct
tcagttacggcagcggccggtgctccacaagttatgagtacgcacatgccgagctcggtt
cctgcgccacctccgtctacagcgcctaatccggctcgtaaaacggctcgtccgatgggg
atctccatgaaggagatcggagtggagaagcctaagcaacaaaccgttcaacaagcgaca
acgaacgtaaaggaggtagtaactccctttgacaatgattccttggttcgtgaatgggat
aattacgccgcaacgattgacaagaaagtgtatcttaagaatacgatgatcaattgcaag
cctaccttgcaagagaattattatttcgaggtagctgtacataacccggggcagcaagag
gaattgatcaataatgcgatccatatcctgccatttctccgccagcatcttaataacagc
cgcatccagatgcgtgtccggatcgtagagggaaatgagaagcacttggcttatacatcc
acggagaagctagagctgctgatgaagataaatcctaccttgggtcgtttgagggatgag
tttaatttgacgttagattaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (41)   
   KEGG ORTHOLOGY (1)   
   RefGene (38)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (20)   
   Pfam (20)   
All databases (71)   

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