KEGG   Parabacteroides distasonis: BDI_3366
Entry
BDI_3366          CDS       T00549                                 
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanyl ligase
  KO
K01929  UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
Organism
pdi  Parabacteroides distasonis
Pathway
pdi00300  Lysine biosynthesis
pdi00550  Peptidoglycan biosynthesis
pdi01100  Metabolic pathways
pdi01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:pdi00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    BDI_3366
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    BDI_3366
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    BDI_3366
Enzymes [BR:pdi01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.10  UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
     BDI_3366
SSDB
Motif
Pfam: Mur_ligase_M Mur_ligase_C Mur_ligase
Other DBs
NCBI-ProteinID: ABR45069
UniProt: A6LHA5
Position
complement(4082679..4083962)
AA seq 427 aa
MSIIDLYDLFIHNPQITTDSRNCPKGSIFFALKGDKFDGNQYAGKALASGCVYAVIDNPD
YYIGERTILVDNVLKTLQQLAHHHRKVLGLPIIGITGTNGKTTTKELLAAVLSTKFNLLY
TEGNFNNHIGVPLTLLRLTHDHEMAVIEMGASHPGDIKELVDIVHPNYGIITNVGRAHLE
GFGSFEGVIRTKGELYDYIRRSKGKIFIKKENEYLQSIAKGIEQITYGNGDDAFASGQVV
SCDPFLVFNWKQQGKLHTVETHIIGSYNLDNVLAAVAVGRFFKIPAERISRAIAAYEPTN
NRSQFKKTDNNELIIDAYNANPSSMKVALDNFITMPVQPKAIILGDMRELGPTSDELHAE
VVAQIKKGQFDKVFLCGEHFSKVGKEFSPFATTEAMVEELRKQPLKGYHILIKGSHSMGL
EKLADIL
NT seq 1284 nt   +upstreamnt  +downstreamnt
atgagtattatcgacctctatgatttatttatacataaccctcaaataacgacagatagc
cggaactgtccgaagggttctatcttcttcgccttaaaaggtgataaattcgacggaaat
caatatgccgggaaagccttggcatccggctgtgtctatgccgtcatagacaatcccgat
tattatataggcgaacgcacgatccttgttgataacgtgctgaagaccttgcaacaatta
gcgcaccatcaccgcaaggtactgggattgccgatcatcgggattaccggaacaaatggc
aagaccacgaccaaagagttattggccgccgtgctctcaacgaaattcaatttactatat
accgaagggaatttcaataaccatattggcgttcccttgaccttgctccgattgactcat
gaccatgagatggcggttatcgagatgggcgccagccatccgggagacatcaaggaatta
gtggatatcgtccatcctaactatggcatcatcacgaacgtaggccgtgcccatctggaa
ggcttcggttctttcgagggtgtgatccggacaaaaggggagttatatgattatatccgt
cgctccaaaggcaagatatttatcaagaaagagaacgagtaccttcagtctatcgccaaa
ggcatcgaacaaatcacatatggaaacggggatgatgctttcgcgtccggacaggtagtc
agttgcgatcctttcttagtgttcaattggaagcaacaaggaaagttgcataccgtcgaa
acacatataatcggtagttataacctagataatgtattggccgccgtcgccgtaggccgc
ttcttcaagatcccggcagagcgtatcagccgtgctatcgccgcttacgagcctaccaat
aaccgttctcagttcaagaaaaccgataataacgaattgattatcgatgcttacaacgca
aatccgagtagcatgaaagtagctctggacaatttcatcaccatgcccgtacagcctaaa
gctatcatccttggagatatgcgcgagcttggaccaactagcgacgaattacacgcggag
gttgtcgcacagatcaagaaaggccagttcgacaaggtgttcctctgcggcgagcatttc
tccaaggtaggcaaagagttctcccccttcgctaccacggaggcaatggtggaagagctt
cggaaacagccgttaaagggctatcatatcttgatcaaaggctctcatagcatggggctg
gagaaactagcggatatcctataa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (52)   
   KEGG ORTHOLOGY (1)   
   RefGene (49)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (74)   

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