KEGG   Pseudomonas aeruginosa DK2: PADK2_28395
Entry
PADK2_28395       CDS       T02161                                 
Name
(GenBank) catabolite repression control protein
  KO
K01142  exodeoxyribonuclease III [EC:3.1.11.2]
Organism
pdk  Pseudomonas aeruginosa DK2
Pathway
pdk03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:pdk00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    PADK2_28395
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pdk03400]
    PADK2_28395
Enzymes [BR:pdk01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     PADK2_28395
DNA repair and recombination proteins [BR:pdk03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     PADK2_28395
SSDB
Motif
Pfam: Exo_endo_phos CbiK
Other DBs
NCBI-ProteinID: AFM67940
Position
6139099..6139878
AA seq 259 aa
MRIISVNVNGIQAAAERGLLSWLQAQNADVICLQDTRASAFDLDDPSFQLDGYFLYACDA
ELPEQGGVALYSRLQPKAVISGLGFETADRYGRYLQADFDKVSIATLLLPSGQSGDESLN
QKFKFMDDFTHYLSKQRRKRREYIYCGSLYVAHQKMDVKNWRECQQMPGFLAPERAWLDE
VFGNLGYADALREVSREGDQFSWWPDSEQAEMLNLGWRFDYQVLTPGLRRFVRNAKLPRQ
PRFSQHAPLIVDYDWQLSI
NT seq 780 nt   +upstreamnt  +downstreamnt
atgcggatcatcagtgtgaacgtgaatggtattcaggctgcggccgagcgcggtttgctc
agttggctgcaagcacagaatgccgacgtgatctgcttgcaggacacccgagcctccgcc
ttcgatctggatgacccgtccttccaactggacggctacttcctttatgcctgcgatgcc
gagctacccgaacagggcggtgtcgcactctacagccgtttgcagcccaaagctgtgatc
agcggcttaggtttcgaaacggccgatcgttacgggcgctacctgcaagccgacttcgac
aaggtgagtatcgccaccctgctgctgccttccgggcagagcggagacgagagcttgaac
cagaaattcaagttcatggacgacttcacccattacttgagcaagcagcgtcgcaagcgc
cgcgaatacatctactgcggctcgctgtacgtcgcccatcagaagatggatgtgaagaac
tggcgcgaatgtcagcagatgccgggcttcctcgcgcccgaacgggcctggctggacgaa
gtgttcggcaacctcggctatgccgacgccctgcgcgaagtcagccgcgaaggcgaccag
ttcagctggtggccggacagcgaacaggccgagatgctcaacctcggctggcgcttcgac
taccaggtgctgacccccggcctgcgccgcttcgtgcgcaacgccaagctgccgcgccag
ccgcgcttctcccagcatgcgccgctgatcgtcgactacgactggcagttgagcatctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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