KEGG   Penicillium digitatum: PDIP_00650
Entry
PDIP_00650        CDS       T04849                                 
Name
(RefSeq) Exosome-associated family protein
  KO
K12592  exosome complex protein LRP1
Organism
pdp  Penicillium digitatum
Pathway
pdp03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pdp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    PDIP_00650
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pdp03019]
    PDIP_00650
Messenger RNA biogenesis [BR:pdp03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Exosome cofactors
     PDIP_00650
SSDB
Motif
Pfam: Sas10_Utp3 Hid1
Other DBs
NCBI-GeneID: 26228388
NCBI-ProteinID: XP_014538814
UniProt: K9GIF3
Position
Unknown
AA seq 238 aa
MDPTYLLPLLEQLDDNVDDLEDVLQPLLARTILKSSNKLPVMDKAKLHVLITYTLESLIF
SYLRLHGVNAKQHPVFRELTRVKQYFEKIKVLETEPEERPMTLDKAAAGRFIKHGLSGND
KYDLERAEKQAKERARAQFKAAMLARKSIEASKAQSNNDSDSDDSEGGVENATTAEPQVD
TTHPGKAEKDSKKKSKGDHKSEISKSKKERKISKATMKEEKKERRLKKEEARKARKAQ
NT seq 717 nt   +upstreamnt  +downstreamnt
atggacccaacatacctactaccgctgcttgagcagctggacgataatgttgatgatttg
gaagatgtgcttcagcctcttttggccagaaccatcctcaaaagttcaaataaactacct
gttatggacaaagcaaaacttcacgtgttgatcacctacacattagaatcactaatcttc
tcttatctgcggcttcatggcgtgaatgcgaagcagcacccggtgttccgggaactgacc
cgcgtgaagcagtactttgaaaagatcaaggtactggagactgaacctgaggagcgccct
atgactcttgataaggcagctgctggtagattcatcaagcatggcctttctggcaatgac
aagtatgacttggaacgggcagaaaagcaggccaaagagcgagcccgtgctcagttcaaa
gcagccatgctcgcccgcaagagtattgaggcttcgaaagcgcaatccaataacgactct
gactctgatgactctgaagggggcgtggaaaatgcaacaacagcagagccccaggttgat
acaactcaccccggaaaggccgagaaagatagcaaaaaaaaatccaagggagaccacaaa
tcagaaatcagcaagtcaaaaaaggagaggaaaatcagcaaggcgacaatgaaagaagag
aagaaggagcgacggctgaaaaaggaggaggctcggaaggcccgaaaggcccaatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (13)   

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