KEGG   Penicillium digitatum: PDIP_58340
Entry
PDIP_58340        CDS       T04849                                 
Name
(RefSeq) DNA mismatch repair protein Msh3
  KO
K08736  DNA mismatch repair protein MSH3
Organism
pdp  Penicillium digitatum
Pathway
pdp03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pdp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    PDIP_58340
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pdp03400]
    PDIP_58340
DNA repair and recombination proteins [BR:pdp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     PDIP_58340
SSDB
Motif
Pfam: MutS_V MutS_III MutS_I MutS_II MutS_IV
Other DBs
NCBI-GeneID: 26234150
NCBI-ProteinID: XP_014533060
UniProt: K9FNK4
Position
Unknown
AA seq 1132 aa
MAPHSSQSSAPSSSLKRKQASISSFFTKPASSATPKDSAPTPDKAPKKRQASPADKIEPK
RDDTFPADDDEEDDDDDEDVVAPAPKRAKTIGTEAEEPIRVATSVHFEHTSQASSSQRTD
IYKFQSSPAAAPVTTEEEGPEQEQRKKEKEKLHQQFVRKLGGSDCQVGIGRIAVSDAASA
EMEAAEAEEDEEPAPPPPPTKGKGAKKGASKLTPMEKQVIEIKRQNMNTVLVIEVGYKFR
FFGEDARIAAKELGIVCIPGKFRFDEHPSEAHIGRFASASIPVHRLHVHVKRLVTAGHKV
GVVRQIETAALKAAGDNRNAPFVRKLTNLYTKGTYIDDAEGLQGPAPAAGGASPATGYMF
CMTETIAKGPENDERVHVGIVAVQPATGDVIYDDFEDGFMRSEIETRLLHIAPCEILIVG
EMSRASEKLVQHLSGSKMNVFGDAVRLERAQKKKTSAAEAHSHVSGFYAGKMKATSTEED
AQAAKLLQNVLDLPEQVTICLSAMIEHMTEYGLEHVFDLTKYFQPFSARSHMLMNGNTLV
SLEIYQNQTDLSTKGSLFWTLDRTQTRFGQRMLRQWVGRPLLDKVRLEERTNAVEELIDP
ARAVPVERVRGLLCKVKSDLEKSLIRIYYGKCERPELLTVLQAMQMIAMEFADIKSPAQT
GFQSTLVSEAIASLPTIRTSVVKFLDKINLHAARTNDKYTFFREAEETEEIGELKLQIGS
TEHGFSEHRKQAASTIGRGKVEYSTVSGIEYLIEIENNSPALKRVPASWVKVSGTKRVSR
FHTPEVIQLIRERDQYKEGLAAACDQAYKTLLADIAAQYQSFRDCIQSLATLDCLLSLAD
IALQPGYVKPEYTEEASLHIEQGRHPMVEQLLTDTYVPNDTNLQHDGTRALLVTGPNMGG
KSSYVRQVALIAIMGQIGSYVPAASARLGLLDAVFTRMGAFDNMLAGESTFMVELSETAD
ILKQATPRSLVILDELGRGTSTHDGVAIAQAVLDHMVRSIQSLTLFITHYQHLSRMVHSF
PDHALRNVHMRFTETDKDKEGDGEITFLYEVTEGVAHRSYGLNVARLASLPSAVIDVARQ
KSAELEESIRRKRLAGLVGAVRRALDVTCSLDGESAGADNLFNRLMASAEQL
NT seq 3399 nt   +upstreamnt  +downstreamnt
atggcacctcactcttcgcaatcctctgcaccttcttcatcgctgaaacgaaagcaagca
agcatctccagttttttcacgaaaccagcatcctcggcaacgcccaaagactccgcaccg
accccagataaggcgcctaagaaaagacaagcgtctccagccgacaagatcgagccaaag
cgagacgatacttttccagcagatgacgatgaagaagatgatgatgatgacgaagatgtc
gtggcgcctgcaccaaagcgagccaaaaccatcggcacagaagcggaggagccgatccga
gttgcgacaagcgtgcacttcgagcacacctctcaggcaagcagcagccaacgcaccgat
atctacaaattccagagctcccctgctgctgcgccagtcaccaccgaggaggagggtcca
gagcaggaacagcggaagaaagagaaggagaaactgcaccagcaattcgtccggaagctc
ggtgggtcagattgccaggttgggattgggagaatcgcagtgagcgatgcagccagtgcg
gagatggaagctgcagaagccgaggaagacgaagagcccgcaccgccaccacccccgact
aaaggcaagggtgcgaagaagggcgcgagcaagctcacgcccatggaaaagcaggtcatt
gagattaagcgtcagaacatgaacacagtgttggttattgaagtgggatacaagttcagg
ttcttcggagaggatgcgcgaattgcggccaaggagctaggcatcgtttgcatccccggg
aagttcagattcgacgaacatccatccgaggcacacatcggtcggtttgcttcggctagt
atccccgtgcaccgattgcacgtacatgtgaagcgactcgttacagctggacacaaggtc
ggcgtggtgcgacagatcgagacggctgcgctcaaggctgcgggtgataatcgcaatgca
ccatttgttcgcaaattaaccaatctctacacgaaaggaacctatatcgatgacgctgaa
ggtctgcagggtcctgcgccggcagccggaggtgcttcccctgcgactgggtatatgttc
tgtatgacggagactattgccaagggccctgagaatgacgagcgagttcatgtcggaatt
gtagccgtccagccggctacaggtgatgttatctacgatgactttgaagatggcttcatg
aggagcgagattgagacaagactcttgcatatcgctccctgtgagatcttgattgttgga
gagatgtctcgagctagcgaaaagcttgtgcagcatttatctggaagcaaaatgaatgtt
tttggggacgctgtgcgtctggagcgggctcagaagaagaaaacctctgctgctgaggca
cacagtcatgtatcgggattttatgcagggaagatgaaggctaccagtaccgaggaggat
gctcaagctgcaaagctgcttcaaaacgtccttgatctcccggagcaggtgactatctgc
ctgtctgctatgattgaacacatgaccgagtatgggttggaacatgtgtttgatctcacc
aaatatttccaacctttctcggctcgttcgcatatgcttatgaacggaaacacgctggtc
agtctagaaatctaccaaaaccaaacggatctctcgacaaagggtagtttattttggacc
ttggatcgaacgcaaacgcgattcggacaacgcatgttacggcaatgggttggtagacct
ttgctggacaaagtgcgcctcgaggagcggacaaatgccgtggaagagcttattgatcct
gcgcgagcggttccggtggagagagtacgagggttgctatgcaaagtcaagagtgatctt
gagaaaagtttgatccgtatttactacggaaagtgcgagcgacccgaacttctcactgtt
ctacaggctatgcagatgattgcaatggaatttgcagatatcaaatcacctgcccagacg
ggctttcaatcaacgctagtgagcgaggcaatcgcctctctgcccacgatccgaacttca
gtcgtcaagtttttggataagatcaacttgcacgctgcacgaaccaatgacaaatatacc
ttctttcgcgaagcggaggagacagaggagattggtgagctcaaactccaaattggaagc
actgaacacgggttctcagaacaccgcaagcaggcggcatcaacgattgggagaggcaaa
gtcgaatactcgacagtctctggcattgagtacttgatcgagatcgaaaacaactcccca
gcactcaagcgcgtgccagcatcgtgggtcaaagtcagcggcacaaaaagagtgtcccgc
ttccacacgccagaagtcatccagctcatccgcgagcgtgatcaatacaaggaaggccta
gcagcagcctgtgaccaagcatataaaactctcctagctgacattgcagcgcagtaccag
tccttccgggattgcatccaatccctcgcaacacttgactgcctattatctctagcagac
atagccctgcaaccgggctatgtcaagcccgagtatacagaagaagcaagcctccacatc
gagcagggccgacacccaatggtcgagcaactcctcacagacacatacgtacccaacgac
acaaacctccaacacgacgggacgcgcgccctgctcgtcaccggtcccaacatgggcggt
aaatccagctacgtgcgacaggtagcacttatcgctattatgggccagatcggatcctac
gtcccagcagcttccgcccgactcggtctcctggatgcggtgttcacgcgcatgggcgcc
ttcgataacatgctcgccggcgaatcaactttcatggtcgaactctccgaaacagcagat
atcctcaagcaagcaacgcctcgatccttggtgatccttgacgagctgggccgcggtacg
tcgacgcatgacggtgttgctatcgcgcaggcggtgctggaccacatggttcggtcgatt
caatccctgacccttttcatcacgcactaccagcacctctcgcggatggtgcattccttc
cccgatcacgctctccgtaatgtccatatgcggttcacggagacggacaaggataaggaa
ggggatggggagattacattcctctatgaggttactgaaggagttgcgcatcgtagttac
gggttgaacgttgcgcgactggcgagcttgccttcggctgttattgatgtcgcccgtcag
aagagtgctgagctggaggagtctattcggcggaagcgcttggctgggcttgttggggcg
gttcgtcgggcccttgatgttacttgtagtctcgatggagagtctgctggtgctgataac
ctctttaataggctcatggccagtgcggagcagctgtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (16)   

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