KEGG   Penicillium digitatum: PDIP_71360
Entry
PDIP_71360        CDS       T04849                                 
Name
(RefSeq) ATP-depentend DNA helicase, putative
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
pdp  Penicillium digitatum
Pathway
pdp03420  Nucleotide excision repair
pdp03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pdp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    PDIP_71360
   03430 Mismatch repair
    PDIP_71360
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pdp03400]
    PDIP_71360
Enzymes [BR:pdp01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     PDIP_71360
DNA repair and recombination proteins [BR:pdp03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     PDIP_71360
   MMR (mismatch excision repair)
    Other MMR factors
     PDIP_71360
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 AAA_30 AAA_12 Viral_helicase1 AAA_11 AAA_22 CsoSCA_C
Other DBs
NCBI-GeneID: 26235452
NCBI-ProteinID: XP_014531293
UniProt: K9G3P1
Position
Unknown
AA seq 995 aa
MDPILDGLNHAQREAVTSSGSILQVLAPPGSGKTKTLTARVAYLLSHHGYQPHDVICCTF
TIKASREMRERLAKLIGEKLESRLILGTFHSICRRYLVKYGYLIGLRKGFGIADSDDTRA
ILRRTIKRLKSSIEVKAAQGRISRHKAHGLGPDALADRAKAEEIELVEIYRAYESALAAS
NLLDYDDLLLRCGDLLRDHPQCVSNVQAVLVDEFQDTNVIQYELMNLFASKNRRITVVGD
PDQSIYGFRSAEIQNLKRMQRRYSNTTVVLLEDNYRSAGSILNAAQEVIEQDTSRPAKAL
LATHSFGTLPVLRRLPTPSAEAQWMVLEIKRCAAMTGGLLRMSDFAVLLRSASLSTQIET
AFGRAGIPYKMVGGRKFFDRTEVKILLNYMRVVGHTGHSDALINIVNVPPRRIGDETIKQ
LTSGAEKAKIPLWDYIKDVIQGRRSTEKKLQKAAEQGLCFLVKLIEASRQKLQECEDASA
PRVLIEFIAERLSFQEYLIRTYPLDEDSRWANVKELMHQANEVAAFEGEEVDKEMDLPEI
EGVQQQHAHPGEEALTRFLANVALATEITTKEETKDGDQPSEKVTISTIHAAKGLEWPVV
FVPAVYNGSIPHSRAEVVEEERRLLYVAMTRAQALLYLSVPIRQPRLGEGEDSATTVTPF
LPPKLTKTRFRPTGPSLHEKVVYAIADILRRPRPSLDDIYQGLEFLPSTLDDRWTAEGEE
DRSTFDDTTNSHDTSGEPNPKRRRSDMNQGPKPTTYISSTGYTMNNSTGFTIPTTVSSGF
TSARDYIAAKPEPSAESASKPPAHAEADAAGASKVKPLSSASRKDGLTQASISNFFAGPG
SQKREPVQSSYPQPPPSHRYEGLPSQHQRSGASIVPSTLSSHRVQPRPLVPTRPTLDPTN
LNGYTWLAAPSKPTLKPTRIPMTQEQSGNATSLGGTAGPDEVKPGRSTRGFQPVSTFHNT
TMSMVQQAPRRTLGIRRSMNGWQDRMKRQGGGQAS
NT seq 2988 nt   +upstreamnt  +downstreamnt
atggatccgattttagatggcttgaatcatgcccagcgagaagctgtcacttcatccggc
tcgatcttacaagtgctcgcacccccgggctcaggtaagacaaaaacattgactgcacgc
gtcgcgtacctcctctcacaccacggataccaaccacacgatgttatctgctgcacattt
actatcaaagctagccgcgaaatgcgggagcggctcgcaaagctcattggagaaaagctc
gaatcacgcttgattctgggcactttccattccatctgtcgccgctacttggttaagtac
ggatacttgatcggcctgcggaaggggtttggcattgcggattcggatgatacccgcgca
attctcagaagaaccattaaacgactgaagtctagcatcgaagtcaaggcggcgcaaggc
cgaatttctcgacataaagcacatggactcggccctgatgccttggcggatagagccaaa
gcagaggagatagagctagttgagatctatcgtgcctatgaatcagcactggcggcctcc
aatctcttggactatgatgacctccttctgcgatgcggagatctgctccgggaccaccca
caatgtgtctcaaatgtgcaggctgtcttggtggatgaattccaggacaccaacgtcata
caatatgaactgatgaatctattcgcatctaagaaccgacggatcaccgtcgtcggagat
ccagatcaaagcatctacggatttcgttctgcggagatccagaatctcaagcggatgcag
cggcgatattcaaacacgacggttgtacttttggaagataattaccgttctgcggggtct
atcctgaatgcagcccaggaagtgattgagcaggatacgagtcggcctgcaaaagcacta
ctagctacgcactctttcggaaccttgcccgtgctaagaagacttccaactcccagcgca
gaagcgcagtggatggtacttgagatcaagcgatgtgcagcgatgaccggcggtctattg
cgcatgtctgactttgctgttttgcttcggtcagcttcgctttctacacaaatcgagacg
gccttcggaagagccggtataccatacaagatggttgggggacgaaagttctttgatcga
actgaagtgaaaattcttctcaattatatgagggttgtgggtcatacgggacattcggac
gcgttgataaatattgtgaatgttccgccacgaaggattggcgatgagacaatcaagcaa
ttaactagtggtgcggagaaggccaagattccactgtgggactacatcaaggatgtcatt
caagggcgccgttcaactgagaagaaactgcaaaaggccgcagagcagggactttgcttt
ttggtcaagttgattgaagcctctagacagaagctgcaagagtgtgaggatgcatccgct
ccacgtgttctgattgaattcattgccgaacgtctctcgttccaggagtatctcatcaga
acctacccccttgatgaagacagtcgctgggctaatgttaaagaactgatgcatcaagcc
aatgaagttgcggcgtttgaaggggaagaggttgacaaagaaatggatctccccgaaatc
gaaggtgtgcagcaacagcatgcgcatcctggcgaggaggctctgactcgtttcctggca
aatgtagccttggctacagagatcacaaccaaagaagaaaccaaggacggagaccagccg
tcagagaaagtcaccatttccactatccacgctgccaagggcttggaatggccagtcgtg
tttgttcccgcagtgtacaacgggagcattccccattcgcgtgcagaggtggtagaagaa
gagagacgattgctctatgtcgcaatgacaagagcacaggccttgctatacctgagtgtt
cctattcgacaaccccggctaggagaaggagaagatagtgccaccacggtgacgccattc
cttcctcccaagttgaccaaaacgcgatttcggccaacggggccgtctcttcatgagaag
gtggtgtatgcaatcgccgatatcttgcgtcgacctcggccatctttagacgacatctac
cagggactcgagtttcttccatcgacactggatgaccgatggacagccgagggtgaggaa
gaccgcagcacattcgatgacacaactaactctcatgacacctctggcgagcccaatcca
aagcgacggcggtcggacatgaatcaggggcccaaaccaactacgtacatctcatcgacc
gggtataccatgaacaactcgacagggtttactattcctacaaccgtttcatcgggtttt
acgtctgccagggattacatagcggccaagcccgaaccctccgcagagtcagcctcaaag
cctccggcgcatgccgaggcagatgcagctggggcaagcaaagtgaaacctctcagcagc
gctagccgtaaagacggactcacacaagcaagcatatccaacttctttgcaggcccagga
tcccagaagagggaaccagttcagtccagctatcctcagccaccaccatcccacagatat
gaagggctaccgtcgcaacaccaacgctcaggggcaagcatcgtaccatctactctatcc
tcgcaccgtgttcagcctcggccacttgttccaacacggccgaccctagatcctacaaat
ctcaatggctacacgtggctggcagctccatccaaaccaactctgaaacctaccaggatt
ccgatgacgcaggaacagagcggcaacgcgacttccttaggcggaacagccgggccagac
gaggtgaaacccggacgctccacccgcgggttccagccggtatcgacgttccacaacacg
acgatgtcaatggttcaacaagcaccacggcggacgttgggaattcgacggagcatgaat
gggtggcaagatcggatgaagcgacagggcggtgggcaggcgagctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (10)   
   Pfam (10)   
All databases (24)   

Download RDF
DBGET integrated database retrieval system