KEGG   Polynucleobacter duraquae: CL55_00012230
Entry
CL55_00012230     CDS       T04207                                 
Name
(GenBank) DNA polymerase III, epsilon subunit and related 3'-5' exonuclease
  KO
K10857  exodeoxyribonuclease X [EC:3.1.11.-]
Organism
pdq  Polynucleobacter duraquae
Pathway
pdq03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pdq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    CL55_00012230
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pdq03400]
    CL55_00012230
DNA repair and recombination proteins [BR:pdq03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA exonucleases
     CL55_00012230
SSDB
Motif
Pfam: QSregVF_b
Other DBs
NCBI-ProteinID: AKD25556
UniProt: A0A0E3ZMF0
Position
1192069..1192725
AA seq 218 aa
MTQAIIFDVEATDKTDAVIIEAASLDVTSINPLSVGNPWVQRYNPGKPISLGALATHHIM
DEELVDCPSSSSFKLPTGIQYIIGHSVDFDWEAIGKPDVKRICTLALARSLWPDLDSHTQ
SALLYHFERSTAREQLRDAHSALADVWICSKILGHIIDRLHPSSLDALWEMSEKARIPTI
MPFGKHKGELISQVPSDYKQWMLRQDNVSEYLRKALQA
NT seq 657 nt   +upstreamnt  +downstreamnt
atgacccaagccattatttttgatgttgaagctactgataagacggatgccgtcattatt
gaagcggcctcattagatgtcacctctattaatccattatctgttggtaatccctgggta
caacgttacaacccaggcaaaccgattagcctaggtgcactagcaacccaccacatcatg
gatgaagagctagtagactgcccatctagcagctcgttcaaattacctactggtattcaa
tacatcatcggtcatagcgttgattttgattgggaggccattggtaaaccggatgtcaaa
cgcatttgcactctggcgcttgctcgcagtctttggccggatctagatagtcacacccaa
agtgccctgctctatcactttgaacgttcgactgctagagagcaactgcgtgatgcacac
agcgcgttagctgatgtctggatctgctctaagatattagggcacattattgatcgcttg
cacccgagctctttggatgccttatgggaaatgtcagaaaaagcacgcattccgacgatc
atgccttttggtaaacacaaaggtgaattaatcagtcaagtgccatccgattacaagcaa
tggatgctgcgtcaagacaatgtctctgagtaccttcgtaaggccttacaggcttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (9)   

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