KEGG   Pseudomonas denitrificans: H681_01600Help
Entry
H681_01600        CDS       T02524                                 

Definition
formamidopyrimidine/5-formyluracil/5-hydroxymethyluracil DNA glycosylase (EC:3.2.2.23)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
pdr  Pseudomonas denitrificans
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:pdr00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    H681_01600
Enzymes [BR:pdr01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     H681_01600
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     H681_01600
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
356149..356961
Genome map
AA seq 270 aa AA seqDB search
MPELPEVETTRRGIAPYLEGQRVSRVIVRERRLRWPIPEDLDVRLSGQRILQVERRAKYL
LLNAEVGTLISHLGMSGSLRLVECGLPAARHEHVDIELESGLALRYTDPRRFGALLWSQA
PLEHELLRHLGPEPLTDAFEGERLYQLSRGRSMAVKPFIMDNAVVVGVGNIYATEALFAA
GIDPRREAGSISRARYLKLAQEIKRILAIAIERGGTTLRDFVGGDGQPGYFQQELFVYGR
GGEFCKVCGSTLREVRLGQRASVYCPRCQR
NT seq 813 nt NT seq  +upstreamnt  +downstreamnt
atgcctgaattacccgaagtcgaaaccacccgccggggcatcgcgccctatctcgaaggc
cagcgcgtcagccgcgtgatcgtccgcgaacgccgtctgcgctggccgatcccggaggat
ctcgacgtacgtctctccgggcagcgcatcctgcaggtggagcggcgcgccaaatacttg
ttgctcaatgccgaggtcggcacgctgatcagccacctgggcatgtcgggcagtctgcgc
ctggtcgaatgcgggctaccggcggcgcgccacgagcacgtggacatcgagctggagtcg
ggcctggcgctgcgctacaccgatccccggcgtttcggcgcgctgctgtggagccaggcg
ccgctggagcacgaattgctgcgccacctcgggccggagccgttgaccgacgccttcgag
ggcgagcggctgtaccagctgtcccgtggccgcagcatggcggtgaagcccttcatcatg
gacaacgcggtggtggtcggcgtgggcaacatctacgccaccgaggcgctgttcgccgcc
ggcatcgatccgcgccgcgaggccggctccatctcccgtgcccgctacctgaagctggcg
caggagatcaagcgcatcctggcgatcgccatcgagcgcggcggcaccacgctgcgcgat
ttcgtcggcggcgacggccagccgggctacttccagcaggagctgttcgtctacggacgc
ggtggcgagttctgcaaggtgtgtggctcgaccctgcgcgaggttcgcctcggccagcgc
gccagcgtgtactgtccgcgctgccaacgttga

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