KEGG   Photobacterium damselae subsp. damselae: CAY62_13545
Entry
CAY62_13545       CDS       T04927                                 
Name
(GenBank) DNA-directed RNA polymerase subunit omega
  KO
K03060  DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
Organism
pds  Photobacterium damselae subsp. damselae
Pathway
pds03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:pds00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    CAY62_13545
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pds03021]
    CAY62_13545
   03400 DNA repair and recombination proteins [BR:pds03400]
    CAY62_13545
Enzymes [BR:pds01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     CAY62_13545
Transcription machinery [BR:pds03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     CAY62_13545
DNA repair and recombination proteins [BR:pds03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      CAY62_13545
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-ProteinID: ARR50439
UniProt: A0A1C3DIN9
Position
I:2867210..2867485
AA seq 91 aa
MARVTVQDAVDKIGNRFDLIQIAARRARQMQTGAKDPLVPEENDKYTVIALREIEEGLIT
KDILDARERQELQEQEAAELAAVSAIAGGNR
NT seq 276 nt   +upstreamnt  +downstreamnt
atggcacgcgtaaccgttcaagacgctgttgataaaattggcaaccgtttcgatctgatc
caaattgctgctcgccgcgcacgtcaaatgcaaactggcgcaaaggatccactggttcca
gaagaaaacgacaagtacacagtaattgcacttcgtgaaatcgaagaaggtctaattact
aaagacatccttgatgctcgcgagcgtcaggaactgcaagagcaagaagctgctgaactt
gcagctgtaagtgctattgctggcggcaaccgttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (12)   

Download RDF
DBGET integrated database retrieval system