KEGG   Photobacterium damselae subsp. damselae: CAY62_13980
Entry
CAY62_13980       CDS       T04927                                 
Name
(GenBank) ATP-dependent DNA helicase Rep
  KO
K03656  ATP-dependent DNA helicase Rep [EC:5.6.2.4]
Organism
pds  Photobacterium damselae subsp. damselae
Brite
KEGG Orthology (KO) [BR:pds00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pds03400]
    CAY62_13980
Enzymes [BR:pds01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     CAY62_13980
DNA repair and recombination proteins [BR:pds03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    CAY62_13980
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 AAA_30 Viral_helicase1
Other DBs
NCBI-ProteinID: ARR50515
UniProt: A0A1X9U405
Position
I:complement(2950972..2952990)
AA seq 672 aa
MKLNPRQNEAVKFVSGPCLVLAGAGSGKTRVITNKIAYLVQHCDYKARNIAALTFTNKAA
REMKERVGQTLGKQESKGLMVSTFHTLGLNIIRREYKALGLKANFSLFDDQDQMALLKEL
TEDELEGDKDLLKQLLSSISNWKNDMLSPADAAARARSERDQLFAHCYHLYQRQMKAYNA
LDFDDLILMPVLLLRDNEEVRSRWQNKIRYLLVDEYQDTNTSQYIFVKLLVGERARFTVV
GDDDQSIYSWRGAQPENLALLNKDFPSLKVIKLEQNYRSTSRILRTANILIANNPHVFEK
TLFSELEEGALLKVITAKNEEHEAEKVVGELIAHRFLNNTAYKDYAILYRGNHQSRLFEK
ALMQNRIPYKISGGTSFFSRAEIKDIMAYLRLLTNQDDDNAFLRIVNTPRREIGPVTLEK
LGNYANMRGKSLFAASFELGLEQHLSGRGLESLQRFTRWVVELADNAERGDTVAAVRQLV
RDIHYEDWLYETSASPKAAEMRMKNVSDLYSWITADLEGDNYDQQERSLKEVVQRMTLRD
MMERGEDDDNADQVQLMTLHASKGLEFPYVYLVGSEEGILPHQTSIDEDNIEEERRLAYV
GITRAQRELTFTMCKERRQYGELIKPEPSRFLYELPQDDLEWDTEKKPVTAQERMQRGQA
HIANIRAMFNKD
NT seq 2019 nt   +upstreamnt  +downstreamnt
atgaaactgaatccaaggcaaaatgaggcggtaaaattcgtttctggtccttgcttagtg
ctagcaggtgctggttcgggtaagacgcgagtgatcactaataaaattgcatatttggtt
cagcattgtgactataaagcacgtaatattgctgccttaacctttaccaataaagcggcg
cgtgagatgaaagagcgtgtcggtcaaaccttaggtaagcaagagtctaaagggttaatg
gtatcgaccttccacactttaggtctcaatattattcgtcgtgaatacaaagcgctgggt
cttaaggcgaacttttctctgtttgatgaccaagatcagatggcgttactaaaagagctg
acagaagatgaattagaaggtgataaagatcttttgaaacagttattgtcgtctatttca
aattggaaaaatgacatgctgtctccagccgatgccgcagcgcgcgcgcgttcagagcga
gatcagctatttgctcactgctaccatctctatcagcgtcaaatgaaagcttataatgcg
ttagattttgatgatctgattctaatgcctgtattactactgcgagacaatgaagaagtg
cgcagtcgctggcaaaataaaattcgttatttgctggtggatgaatatcaagataccaac
accagccaatatatctttgtaaaacttctggttggagaacgcgctcgatttaccgtggtg
ggtgatgatgatcagtctatctactcatggcgtggtgcacagccagaaaacttggccttg
ttaaataaagatttcccaagtcttaaggtgatcaaacttgagcaaaattaccgctcaacc
agtcgtattttacgtacggcaaatatcttgattgccaataatccacacgtctttgagaaa
acgctattttcagagctggaagaaggggcattactcaaggttatcacggctaaaaatgaa
gagcatgaagctgaaaaagtggttggtgagttgattgcccatcgctttttaaataacaca
gcttataaagattatgcgattttgtatcgaggcaaccatcagtcccgcttgtttgaaaaa
gcattaatgcaaaaccgtattccatataagatctcaggtggtacatcgtttttctcgcgc
gcagaaattaaagatatcatggcgtatctacggttactcactaaccaagatgatgacaac
gcctttttacgtatcgtgaatacaccccgtcgtgaaattggcccggtaacgttagaaaag
ttgggtaattacgccaatatgcgtggcaagagtttatttgccgcaagctttgagctgggt
cttgaacagcatttgtccggtcgaggtttagagtctttgcagcgatttacgcgttgggtg
gttgagttagcagataatgctgagcgtggcgatacggttgcagctgtgcgtcagttagtg
cgggatattcattatgaagattggttgtatgagacatcagccagtccgaaagccgctgag
atgcgcatgaaaaatgtctctgacctgtatagttggatcacagctgatcttgaaggtgat
aattatgaccagcaagagcgcagtttaaaagaggtggtgcagcgtatgaccttgcgcgat
atgatggagcgtggggaagatgacgataatgcagatcaggtgcagctaatgacattgcac
gcctcaaagggattggagtttccttatgtttatcttgttggctctgaagagggaattttg
ccgcatcaaaccagtattgatgaagacaatattgaagaagagcgtcgtctcgcttatgtg
ggcatcacccgagcacaacgagaactgactttcactatgtgtaaagagcgccgtcaatat
ggtgagctgattaaaccagagccaagtcgcttcttgtatgagttgccacaagatgatctg
gagtgggatacagaaaagaaacctgttactgctcaagagcgtatgcagcgcggtcaggct
catattgcaaatattcgagccatgtttaataaagactaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (15)   

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