KEGG   Pseudonocardia dioxanivorans: Psed_1001
Entry
Psed_1001         CDS       T01479                                 
Name
(GenBank) ABC-type transporter, periplasmic subunit
  KO
K15580  oligopeptide transport system substrate-binding protein
Organism
pdx  Pseudonocardia dioxanivorans
Pathway
pdx01501  beta-Lactam resistance
pdx02010  ABC transporters
pdx02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:pdx00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    Psed_1001
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Psed_1001
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    Psed_1001
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:pdx02000]
    Psed_1001
Transporters [BR:pdx02000]
 ABC transporters, prokaryotic type
  Peptide and nickel transporters
   Oligopeptide transporter
    Psed_1001
SSDB
Motif
Pfam: SBP_bac_5 K1377
Other DBs
NCBI-ProteinID: AEA23252
UniProt: F4CKP5
Position
1060989..1062692
AA seq 567 aa
MRRSRAAASAIALTAVAAMVLTGCSQKSNQSTGGSGQTAVGFPETQDLPPVAGKPGGTFR
LGITEPTAIDPYNAQESEGILVNKALFTGLVNVKPNGDVYDGVASKWEPNADCTAWTFTL
KPNQVFSNGEPVDSAAFKRGWERTSAKASASDVAYHLDEVQGFAQMQDGSASTLSGVDAT
DPNVLKVGLSKADCEFELRTAAPPLAPVPTVAGAADNKTYNDMPIGNGPFKMDGPWQHDK
GIKLVRNDSYSAGPKANLDAVEITITPADTGIQAEYDGFNNGQFDWARIPTPLLTQARAA
NESKNQWISKKTAGINYLLVSVTTKPLNTADARKAVSEAIDRNAIAQGVFQGSQVPADAF
IPASFTNAYQPGVCTACKYDPEDAKKLAASAGLTPGTEVNFQFNTGGGHEEWTAAVKQQL
ETNLGLKVNYSGVPFKDLLVNEQQPNATGLFRAGWTADYPTPGNFLQPLLSTQAIGAATP
NDVANGDNRGRYSNPQFDQLLAQAAGTQDVAKRNDLYKQAEKIAIGDDMALIPLFARQQF
RLANTAKFGNVNMDFWENPTLSEITIK
NT seq 1704 nt   +upstreamnt  +downstreamnt
atgaggagatcgagggcggccgcatcggccatcgcgctcaccgcggtggccgcaatggtc
ctcacgggatgcagccagaagtcgaaccagtcgaccggcgggagcggacagaccgccgtc
ggcttcccggagacgcaggacctgccgcccgtcgccggcaagcccggcggcacgttccgg
ctcggcatcaccgagcccaccgcgatcgacccgtacaacgcccaggagtccgagggcatc
ctcgtcaacaaggcgctgttcaccggtctggtcaacgtcaagcccaacggcgacgtctac
gacggtgtggcctcgaagtgggagcccaacgccgactgcacggcgtggacgttcaccctc
aagcccaaccaggtgttctccaacggcgagccggtcgactcggcggcgttcaagcgcggc
tgggagcgcacctcggcgaaggcgtcggcctccgacgtcgcctaccacctcgacgaggtg
cagggcttcgcccagatgcaggacggctccgccagcacgctctcgggcgtcgacgccacc
gacccgaacgtcctgaaggtcgggctgtccaaggccgactgcgagttcgagctgcgcacc
gccgcgccgccgctggcgccggtcccgacggtcgccggcgcggccgacaacaagacctac
aacgacatgcccatcggcaacggcccgttcaagatggacggtccgtggcagcacgacaag
ggcatcaagctggtccgcaacgacagctacagcgccggtccgaaagcgaacctggacgcc
gtcgagatcaccatcacccccgccgacaccggcatccaggccgagtacgacggcttcaac
aacggccagttcgactgggcccggatcccgacgccgctgctcacgcaggcgcgcgcggcg
aacgagtcgaagaaccagtggatctccaagaagacggcgggcatcaactacctgctcgtg
tcggtgaccacgaagccgctgaacaccgccgacgcccgcaaggccgtctccgaggcgatc
gaccgcaacgcgatcgctcagggcgtcttccagggctcgcaggtcccggccgacgcgttc
atcccggcgtcgttcaccaacgcctaccagcccggcgtctgcacggcctgcaagtacgac
cccgaggacgcgaagaagctggccgcatcggccggcctgaccccgggcaccgaggtcaac
ttccagttcaacaccggtggcggccacgaggagtggacggccgcggtgaagcagcagctg
gagaccaacctggggctcaaggtcaactactcgggcgtgccgttcaaggacctgctggtc
aacgagcagcagcccaatgcgaccggcctgttccgcgccggctggaccgccgactacccg
acgccgggcaacttcctgcagcccctgctgtcgacgcaggcgatcggcgccgcgacgccc
aacgacgtcgccaacggtgacaaccgcggccgctacagcaacccgcagttcgaccagctg
ctcgcccaggcggcgggtacgcaggacgtggccaagcgcaacgacctgtacaagcaggcc
gagaagatcgcgatcggcgacgacatggcgctgatcccgctcttcgcccgccagcagttc
cggctggccaacaccgcgaagttcggcaacgtcaacatggacttctgggagaacccgacc
ctgtccgagatcaccatcaagtga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (25)   

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