KEGG T01479: Psed

Pseudonocardia dioxanivorans: Psed_2801

Entry

Psed_2801 CDS T01479

Definition

UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase (EC:6.3.2.13)

Orthology

K01928

UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]

Organism

pdx Pseudonocardia dioxanivorans

Pathway

pdx00300	Lysine biosynthesis
pdx00550	Peptidoglycan biosynthesis

Class

Metabolism; Amino acid metabolism; Lysine biosynthesis [PATH:pdx00300]
Metabolism; Glycan biosynthesis and metabolism; Peptidoglycan biosynthesis [PATH:pdx00550]

SSDB

Motif

Pfam:

Mur_ligase_M Mur_ligase_C Mur_ligase Corona_6B_7B

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

2958771..2960276

AA seq 501 aa
MRPVDVAVLAASADAELRDPAAAVRPVTGATLRASDVRPGDLFAALPGSRAHGADFTAAA
LAAGAVAILTDPAGAAREAVAQAAVPVLVHEAPRRVLGDLAARIYGDPTARLDVVGVTGT
SGKTTVGHMLEAGLAAGGRATGLLGTVTTRIRGAEAPSLFTTPESPDLQALFAVMAERGV
TDVAMEVSSHALALDRVAGTRFSVAAFTNLSQDHLDFHRDMDDYFEAKALLFDPSRQGAA
RRRVVCVDDEWGRRLADRHPDAVTVATTGPADWTAESVHQDDDGTQSFVAARPGGTVPVR
LRLPGRYNVANALVALACLDAAGVPAEVAAPRLAELAVPGRMQRVDAGQDFLVVVDYAHK
PAAVGALLAALRGQVGGRIVTVLGCGGDRDRGKRPLMGAIAAAGSDLLVVTDDNPRTEDP
AAIRRAVREGAEAEPRRGEIVEIGDRRAAIAAAVAAARPGDAVVVAGKGHEKGQEIDGVK
HPFDDVDEVRAALRSAGGVHG

NT seq 1506 nt +upstreamnt +downstreamnt
gtgcggcccgtcgacgtcgcggtcctcgccgcctccgccgacgccgagctgcgcgacccg
gccgccgcggtgcgccccgtgaccggcgcgaccctgcgcgcctccgacgtccgcccgggc
gacctgttcgcggcgctgcccgggtcccgcgcccacggcgcggacttcaccgccgcggcg
ctggccgccggtgccgtcgcgatcctcaccgacccggccggtgccgcccgcgaggcggtc
gcgcaggccgcggtgcccgtcctcgtgcacgaggcgccccgccgcgtcctcggcgacctc
gccgcccgcatctacggcgaccccaccgcccggctcgacgtcgtcggtgtcaccgggacc
agcggcaagaccacggtcgggcacatgctcgaggcgggcctcgccgcgggcggccgggcc
accgggctgctcggcaccgtcaccacgcgcatccgcggcgccgaggccccgagcctgttc
accacccccgagtcgcccgacctgcaggcgctgttcgcggtgatggccgagcgcggcgtc
accgacgtcgcgatggaggtctccagccacgcgctggcgctcgaccgggtcgccggcacc
cggttctccgtcgcggcgttcaccaacctgtcgcaggaccacctcgacttccaccgcgac
atggacgactacttcgaggccaaggcgctgctgttcgacccgtcgcggcagggcgccgcg
cgccgtcgcgtcgtgtgcgtcgacgacgagtggggccgtcggctcgccgaccgccacccg
gacgcggtcaccgtcgcgacgaccggcccggccgactggaccgcggagtcggtgcaccag
gacgacgacggcacgcagtcgttcgtcgccgcccggcccggcgggacggtcccggtgcgg
ctgcggctgcccggccgctacaacgtcgccaacgcgctggtggctctcgcgtgcctggac
gcggcgggcgtccccgccgaggtcgcggcgccgcggctggccgagctcgccgtcccgggc
cggatgcagcgcgtcgacgcgggacaggacttcctcgtcgtcgtcgactacgcgcacaag
cccgccgccgtcggcgcgctcctggccgcgctgcgcggccaggtcggcggccggatcgtc
accgtcctgggctgcggcggcgaccgcgaccgcggcaagcggccgctgatgggcgcgatc
gcggcggccgggtcggacctgctcgtcgtcaccgacgacaacccgcgcaccgaggacccg
gcggccatccgccgggccgtgcgggagggcgcggaggccgagccgcgccgtggcgagatc
gtcgagatcggcgaccggcgggcggccatcgccgcggccgtcgcggcggcccggcccggc
gacgcggtcgtcgtcgcgggcaagggacacgagaagggccaggagatcgacggcgtgaag
cacccgttcgacgacgtcgacgaggtacgggccgcactgcggtccgccggcggggtgcac
ggatga

All links

Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-PDX (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (22)   

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