KEGG   Pseudonocardia dioxanivorans: Psed_4762Help
Entry
Psed_4762         CDS       T01479                                 

Definition
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
pdx  Pseudonocardia dioxanivorans
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:pdx00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    Psed_4762
Enzymes [BR:pdx01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Psed_4762
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Psed_4762
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
complement(5097436..5098332)
Genome map
AA seq 298 aa AA seqDB search
MPELPEVEVVRRGLADHVAGRRIATVTVAHPRAIRRHAAGAADFTGRLAGRLVGAVRRRG
KYLWLELADAAQDAPQPGDDAVLAHLGMSGQMLVADHGKPDEKHLRVRVTFDDDGPELRF
VDQRTFGGLSAHPLAPAAGGGLLPAPVAHIARDPMDPAFVLDDAVAGIRRRRTGLKRALL
DQTVVSGIGNIYADEALWRARLHWARPTESLTRAQGRAVLTAAAEVMDEALAQGGTSFDA
LYVNVNGASGYFDRSLAVYGQTDRACPRCGTPIRREAFMNRSSFSCPRCQPRPRNAHP
NT seq 897 nt NT seq  +upstreamnt  +downstreamnt
gtgccagagctccccgaggtcgaggtcgtccgccgcggactggccgaccatgtggccggt
cgccggatcgccaccgtcaccgtcgcgcacccccgcgcgatccgccggcacgccgccggg
gccgccgacttcaccggccggctcgccggtcgactggtcggtgcggtccgccgccgaggc
aagtacctctggctggagctggccgatgcggcgcaggacgcgccgcagccgggcgacgac
gccgtcctcgcccacctcgggatgagcgggcagatgctcgtcgccgaccacggcaagccc
gacgagaagcacctgcgcgtgcgcgtcacgttcgacgacgacgggcccgagctgcggttc
gtcgaccagcgcacgttcggcggcctctcggcccaccccctggcccccgccgccgggggc
gggctgctgccggcgccggtcgcccacatcgcgcgcgacccgatggaccccgcgttcgtc
ctcgacgacgccgtcgccggcatccggcgccgccgcaccgggctcaagcgggcgctgctc
gaccagaccgtcgtctccgggatcggcaacatctacgccgacgaggcgctctggcgggcg
cggctgcactgggcccgtccgacggagagcctcacccgggcgcagggccgcgccgtgctc
accgcggcggccgaggtgatggacgaggcgctcgcgcagggcgggacgtcgttcgacgcg
ctgtacgtcaacgtcaacggggcgtcgggctacttcgaccgctcgctggccgtctacggg
cagaccgaccgggcctgcccgcgctgtggcacgccgatccggcgcgaggcgttcatgaac
cggtcgtcgttctcatgcccgcgctgccagccgcgcccccgcaacgcgcacccctga

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