KEGG   Pseudonocardia dioxanivorans: Psed_4763
Entry
Psed_4763         CDS       T01479                                 
Name
(GenBank) Ribonuclease 3
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
pdx  Pseudonocardia dioxanivorans
Brite
KEGG Orthology (KO) [BR:pdx00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pdx03019]
    Psed_4763
   03009 Ribosome biogenesis [BR:pdx03009]
    Psed_4763
   03036 Chromosome and associated proteins [BR:pdx03036]
    Psed_4763
Enzymes [BR:pdx01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     Psed_4763
Messenger RNA biogenesis [BR:pdx03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     Psed_4763
Ribosome biogenesis [BR:pdx03009]
 Eukaryotic type
  90S particles
   RNase
    Psed_4763
 Prokaryotic type
  rRNA processing factors
   Psed_4763
Chromosome and associated proteins [BR:pdx03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     Psed_4763
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm DND1_DSRM
Other DBs
NCBI-ProteinID: AEA26910
UniProt: F4D1J8
Position
complement(5098343..5099059)
AA seq 238 aa
MEDHGPLLRALGVELDPELLTLALTHRSYAYENGGLPTNERLEFLGDSVLSIVVTERLYL
DHPDLPEGQLAKLRASVVNMNALAGVAAELVPDGLGAHLFLGRGEELTGGRAKASILADA
TEALIGAVYLQHGLETSRDVIHRLFADLLRNAPLLGAGLDWKTSLQELTAAAELGVPEYR
ITEDGPDHLKTFTATAVVGGRELGSGDGRTKKEAEQKAAALAWRTLSAEADGSVGTAV
NT seq 717 nt   +upstreamnt  +downstreamnt
gtggaggatcacggccccctcctccgtgcgctcggggtcgagctcgaccccgagctgctg
accctcgcgctgacccaccgctcctacgcctacgagaacggcgggctgcccaccaacgag
cgcctggagttcctgggcgactccgtgctgagcatcgtcgtcaccgagcggctctacctc
gaccacccggacctgcccgagggccagctggccaagctgcgggcgagcgtggtcaacatg
aacgcgctggccggtgtggccgccgagctggtgcccgacgggctgggcgcgcacctgttc
ctcggccgcggtgaggagctcaccggcggccgggcgaaggcgagcatcctcgccgacgcc
accgaggcgctcatcggtgccgtctacctgcagcacgggctggagacgtcgcgcgacgtc
atccaccggctcttcgccgacctgctgcgcaacgccccgctgctgggcgccggactcgac
tggaagacgtcgctgcaggagctcaccgccgcggccgagctgggtgtgcccgagtaccgg
atcaccgaggacggtcccgaccacctcaagacgttcaccgcgacggccgtcgtcggcggg
cgcgagctgggctcgggcgacgggcgcaccaagaaggaagccgagcagaaggcggccgcg
ctcgcctggcggacgctgtccgccgaggccgacggatccgtcggcaccgccgtctga

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Ontology (5)   
   KEGG BRITE (5)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (21)   

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