KEGG T01479: Psed

Pseudonocardia dioxanivorans: Psed_4794

Entry

Psed_4794 CDS T01479

Definition

D-alanine--D-alanine ligase (EC:6.3.2.4)

Orthology

K01921

D-alanine-D-alanine ligase [EC:6.3.2.4]

Organism

pdx Pseudonocardia dioxanivorans

Pathway

pdx00473	D-Alanine metabolism
pdx00550	Peptidoglycan biosynthesis
pdx01100	Metabolic pathways

Class

Metabolism; Metabolism of other amino acids; D-Alanine metabolism [PATH:pdx00473]
Metabolism; Glycan biosynthesis and metabolism; Peptidoglycan biosynthesis [PATH:pdx00550]

SSDB

Motif

Pfam:

Dala_Dala_lig_C Dala_Dala_lig_N ATP-grasp_4 CPSase_L_D2 ATP-grasp ATP-grasp_3 RimK

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

complement(5132747..5133844)

AA seq 365 aa
MGERRTRVAVVFGGRSSEHTISCVSAGSVLAHLDRDRFDVVPVGITPDGAWVLGTDDPAR
LRIDGRTLPVVDGTGAALALPGDPTRGGLVRLDRDRAGEVFSGVDVVFPVLHGPFGEDGT
IQGLFEMAGLPYVGSGVLASAAGMDKEFTKKLLAAEGLAVGSLVVLRPGTQSLTAAQQER
LGLPVFVKPARAGSSVGITRVTSWDRLDEAVAAARVHDPKVLVEAAIVGREVECGVLEYP
DGTVRASLPAEIRLVSGSAEFYDFDAKYLDDACEFDIPAKLDDDVTERVRDQAVAAFRAL
DCQGLARVDFFVGDDGAPVVNEVNTMPGFTPISMYPRMWAETGVDYPTLLATLVDTALAR
GTGLR

NT seq 1098 nt +upstreamnt +downstreamnt
atgggtgagcgcaggaccagggtcgcggtggtgttcggtggccgcagctccgaacacacc
atctcgtgcgtgtcggcgggcagcgtgctcgcccacctcgaccgcgaccggttcgacgtg
gtgcccgtcggcatcacgccggacggcgcctgggtgctcggcaccgacgaccccgcccga
ctgcgcatcgacggccgcaccctgcccgtcgtcgacgggaccggcgccgcgctcgccctg
cccggcgacccgacccgcggcggcctcgtccgcctcgaccgcgaccgggcgggcgaggtg
ttctccggtgtcgacgtcgtcttccccgtgctccacggacccttcggcgaggacggcacg
atccaggggctgttcgagatggccgggctgccctacgtcgggtccggcgtgctcgcgagc
gccgcgggcatggacaaggagttcaccaagaagctcctggccgccgaggggctcgcggtc
gggtcgctggtggtgctgcggccgggcacgcagtcgctgaccgcggcgcagcaggaacgc
ctcgggctgccggtgttcgtcaagcccgcgcgcgccgggtcgtcggtcgggatcacccgc
gtcacctcctgggaccggctcgacgaggccgtcgcggccgcccgcgtgcacgaccccaag
gtgctcgtcgaggccgcgatcgtcggtcgtgaggtcgagtgcggcgtcctcgagtacccc
gacggcaccgtgcgggcgagcctgcccgcggagatccggctcgtgtccgggtcggcggag
ttctacgacttcgacgccaagtacctcgacgacgcgtgcgagttcgacatccccgccaag
ctcgacgacgacgtcaccgagcgggtgcgcgaccaggcggtggccgcgttccgggcgctg
gactgccagggcctcgcgcgggtggacttcttcgtcggcgacgacggcgcgcccgtcgtc
aacgaggtcaacacgatgccggggttcaccccgatctcgatgtacccgcggatgtgggcc
gagaccggtgtcgactacccgaccctgctcgccacgctcgtcgacaccgcgctggcccgc
ggcaccgggctgcgctga

All links

Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-PDX (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (25)   

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