KEGG   Pseudonocardia dioxanivorans: Psed_5042
Entry
Psed_5042         CDS       T01479                                 
Name
(GenBank) Oligoribonuclease
  KO
K13288  oligoribonuclease [EC:3.1.-.-]
Organism
pdx  Pseudonocardia dioxanivorans
Brite
KEGG Orthology (KO) [BR:pdx00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pdx03019]
    Psed_5042
   03009 Ribosome biogenesis [BR:pdx03009]
    Psed_5042
Messenger RNA biogenesis [BR:pdx03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     Psed_5042
Ribosome biogenesis [BR:pdx03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    Psed_5042
SSDB
Motif
Pfam: RNase_T Rv2179c-like
Other DBs
NCBI-ProteinID: AEA27180
UniProt: F4CNF6
Position
5397362..5397976
AA seq 204 aa
MNDRLVWIDCEMTGLDLQRDALIEIAVLVTDGDLNVLGEGVDVVIHADESALAAMPDVVR
DMHARSGLTEEVRRSTVTLQEAEQAVLAYVREHVPDPVSAPLAGNSIATDRGFLARDMPE
LDAHLHYRMVDVSSIKELCRRWFPRVFYAKPEKGLAHRALADIRESIRELAYYRATLFVA
PPGPTSEQAQAAAAAVSGSGVEAR
NT seq 615 nt   +upstreamnt  +downstreamnt
atgaacgaccgtctggtgtggatcgactgcgagatgacgggtctcgacctgcagcgcgac
gcactgatcgagatcgccgtgctcgtgaccgacggggacctcaacgtcctcggcgaaggt
gtcgacgtcgtcatccacgccgacgagtccgccctcgccgcgatgcccgacgtcgtgcgc
gacatgcacgcccgctccggcctcaccgaggaggtgcggcgctcgacggtgacgctccag
gaggccgagcaggccgtgctggcctacgtgcgcgagcacgtccccgacccggtgtcggcg
ccactggcgggcaactcgatcgccaccgaccgcggcttcctcgcccgcgacatgccggag
ctcgacgcgcacctgcactaccggatggtcgacgtcagctcgatcaaggagctgtgccgg
cgctggttcccgcgggtgttctacgccaagcccgagaagggcctggcgcaccgcgcgctc
gccgacatccgcgagtcgatccgggagctcgcgtactaccgcgcgacgctgttcgtcgca
ccccccggaccgacgtccgagcaggcccaggcggcggccgcggcggtgtcggggtccggt
gtcgaagcccgctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (17)   

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