KEGG   Pseudoalteromonas espejiana: PESP_a0136
Entry
PESP_a0136        CDS       T04989                                 
Symbol
dbpA
Name
(GenBank) ATP-independent RNA helicase DbpA
  KO
K05591  ATP-dependent RNA helicase DbpA [EC:5.6.2.6]
Organism
pea  Pseudoalteromonas espejiana
Brite
KEGG Orthology (KO) [BR:pea00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pea03009]
    PESP_a0136 (dbpA)
Enzymes [BR:pea01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     PESP_a0136 (dbpA)
Ribosome biogenesis [BR:pea03009]
 Prokaryotic type
  rRNA helicases
   PESP_a0136 (dbpA)
SSDB
Motif
Pfam: DEAD Helicase_C DbpA ResIII AAA_19 P-loop_SecA
Other DBs
NCBI-ProteinID: ASM48416
Position
I:121948..123336
AA seq 462 aa
MTSTAFSSLALPAGLVDNLSTLGYSQMTPVQAQSLPPVLSGKDIIAQAKTGSGKTAAFSL
GVLAKLNVKRFRIQSLVLCPTRELAEQVAVEMRKLARGIHNIKILTLCGGVSIGPQIGSL
EHGAHIIVGTPGRVDDHIRKGTLRLGDVETLVLDEADQMLDMGFQDTLDAIIERIPQNRQ
TLLFSATFPRAIEAIAKRVLKNPEMIKVEEEQEKSTIKQYFYKMDNNKQRYSTLKLLLLK
FTPQSCVVFCNTKVETQQVCDDLADEGFSAVALHGDLEQRDRERTLIHFANKSASILVAT
DVAARGLDIDDMDMVINYHLAHDPQTHVHRVGRTGRAGKKGIACSIYGDAEQFKVAQIGD
HYERDFLPEPMPAFSLLEKPPYKPEMVTLMIDSGKKQKVRAGDILGALTGKDGIAGRQVG
KINVLDNVAFVAVERNASKPALRKLTEGNIKGRKIRARRLTR
NT seq 1389 nt   +upstreamnt  +downstreamnt
gtgacttctactgcattttcatctttggctttacctgctggtttagttgataatttatca
acacttggctattcgcaaatgactcctgtgcaagcacaaagcctgccacctgtattgtca
ggaaaagatatcattgcgcaagcaaaaaccggctcaggcaaaacggctgcctttagtttg
ggcgtactagcaaaattaaatgtaaagcgctttcgtattcaatcgttagtgctttgccca
acgcgtgagctggccgagcaagtcgcagtagaaatgcgaaaacttgcacgtggcattcac
aatattaaaattttaaccttatgtggtggtgtttcaattggcccacaaattggctcactt
gaacacggtgcacatattattgtgggtacacctgggcgtgtagacgaccatattcgcaaa
ggtacactgcgtttaggtgatgttgaaacgctagtacttgatgaagctgaccaaatgtta
gatatgggttttcaagatacccttgatgccattattgagcgcataccgcaaaatcgccaa
accttgctatttagtgctacgttcccgcgtgcaatagaggcaatagctaagcgagtgctt
aaaaatccagaaatgattaaagtagaagaagagcaagaaaaaagcactattaaacaatac
ttctacaaaatggataacaataaacagcgttactctacacttaaattattactgctaaaa
tttactccgcaaagctgtgttgtgttttgtaacaccaaggtagaaacccagcaagtatgt
gacgatttagccgacgaaggctttagcgctgtagcgcttcatggtgatttagagcagcgt
gatcgtgaacgcacacttattcactttgctaataaaagtgcgtcaatattagtggctacc
gatgtagctgcccgcggtttagatattgatgatatggacatggtaattaattaccattta
gcgcacgacccacaaacacatgtacaccgtgtagggcgcactggccgagcgggcaaaaaa
ggaatcgcgtgctctatttatggtgatgcagagcaatttaaagtggcgcaaattggcgat
cattacgagcgcgattttttaccagagccaatgccagcatttagcctactagaaaaaccg
ccttacaaaccagaaatggtcaccttgatgatcgactctggtaaaaagcaaaaagtacgc
gcaggcgatatacttggtgctttaacgggcaaagatggtatagcagggcgccaagtaggt
aaaattaacgtgttagacaacgttgcttttgttgccgttgagcgtaacgcatcaaaacca
gcccttcgtaaattaacagagggtaatattaaagggcgaaaaattcgcgctcgtcgcctc
actcgctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (13)   

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