KEGG   Pseudoalteromonas espejiana: PESP_a1412
Entry
PESP_a1412        CDS       T04989                                 
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
pea  Pseudoalteromonas espejiana
Pathway
pea03030  DNA replication
pea03430  Mismatch repair
pea03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pea00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    PESP_a1412 (dnaQ)
   03430 Mismatch repair
    PESP_a1412 (dnaQ)
   03440 Homologous recombination
    PESP_a1412 (dnaQ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pea03032]
    PESP_a1412 (dnaQ)
   03400 DNA repair and recombination proteins [BR:pea03400]
    PESP_a1412 (dnaQ)
Enzymes [BR:pea01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     PESP_a1412 (dnaQ)
DNA replication proteins [BR:pea03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     PESP_a1412 (dnaQ)
DNA repair and recombination proteins [BR:pea03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     PESP_a1412 (dnaQ)
SSDB
Motif
Pfam: RNase_T Rv2179c-like RNase_H_2 DNA_pol_A_exo1 vATP-synt_AC39
Other DBs
NCBI-ProteinID: ASM49533
Position
I:1347838..1348551
AA seq 237 aa
MARRQIVLDTETTGIDPKQGHRIIEIGCVELVNRRLTGNNFHVYINPQRSIEEEAIDVHG
ITNEFLRDKPLYRDIAQEFFDYIKGAELVIHNAPFDVGHMDNEFALLNQGYPNTHDYCQV
LDTLKMARDLHPGQKNNLDALCRRYDIDNAKRTLHGALLDSEILADVYLAMTGGQTKLNL
NQNKDDGSDQQKGGIRRLSAERAPLVVLRANDAEQSAHEARLDLVNKEGGQCLWRAE
NT seq 714 nt   +upstreamnt  +downstreamnt
atggcacgcagacaaatagttttagatacagaaaccaccggcatcgaccctaaacaaggg
caccgcattatagaaatagggtgtgtagaattagtaaaccggcgtttaaccggcaataac
tttcatgtttacataaacccacaacgcagcattgaagaagaagcgatagacgttcacggt
attaccaacgaatttttacgcgacaaaccgctttaccgcgatatagcccaagagtttttt
gactatataaaaggggctgagctggttattcataacgcaccgttcgatgtgggccatatg
gataatgaatttgcgctacttaatcagggctatcctaatacccacgattactgccaagtt
ctcgacacccttaaaatggcgcgtgacttgcatccaggtcaaaagaataacctagatgct
ttgtgtcggcgctacgatatagacaacgcaaaacgtaccctacatggcgcattactggat
tctgaaattttagccgatgtttaccttgccatgactggtgggcaaaccaagctaaactta
aatcaaaataaagatgatggtagcgatcaacaaaagggcggtataagacgtttaagcgca
gaacgtgccccattagttgttttacgtgcaaacgacgctgagcaaagcgcacacgaagca
cgattagatcttgtaaataaagaaggcggccaatgtttatggcgcgctgaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (17)   

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