KEGG   Pseudoalteromonas espejiana: PESP_a1596
Entry
PESP_a1596        CDS       T04989                                 
Symbol
rsmF
Name
(GenBank) 16S rRNA (cytosine1407-C5)-methyltransferase
  KO
K11392  16S rRNA (cytosine1407-C5)-methyltransferase [EC:2.1.1.178]
Organism
pea  Pseudoalteromonas espejiana
Brite
KEGG Orthology (KO) [BR:pea00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pea03009]
    PESP_a1596 (rsmF)
Enzymes [BR:pea01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.178  16S rRNA (cytosine1407-C5)-methyltransferase
     PESP_a1596 (rsmF)
Ribosome biogenesis [BR:pea03009]
 Prokaryotic type
  rRNA modification factors
   16S rRNA modification factors
    PESP_a1596 (rsmF)
SSDB
Motif
Pfam: Methyltr_RsmB-F Methyltr_RsmF_N YebU_pre-PUA_dom Methyltranf_PUA RsmF_methylt_CI VMAP-M12 Methyltransf_31 DUF6559
Other DBs
NCBI-ProteinID: ASM49691
Position
I:complement(1537162..1538613)
AA seq 483 aa
MNANTYIPEHFIDDVKTYLPAHLNLEDFINACRRPLRKSIRVNTLKITIEDFLKRADQKN
WQLTPIPWCNEGFWLERPSDEEQNLALGNTDLHLSGAMYVQEASSMLPPMALKQSIENSD
LQDSYVLDMASAPGSKTSQLAAIMNNQGVLVANELSSSRLKVLSATLKRMGIGNCALSHF
DGVIFGNYMFECFDSILLDAPCSGEGTVRKDADALKNWSIESNIEIAQVQKDLIKSAFYA
LKPSGTLVYSTCTLTPLENQKVCDYLLSEFGDYIEPQSLSDLFQGAEKATTAEGYLHVWP
QTFDSEGFFIAKFKKLASCNNPTQSVKKGAFPFNEFDKKQTTSFMSELKKQFGLKALPGN
LMQRDKELWLFPQGFEAVQNKIKYARLGIQIGIIHKNGVRLTHEFATVFGNECKSNTYAL
TNEQANDYFNGKDIRFEEVTKASGEVVLTLCGCPIGLGKWQKNKIKNSLPRDLVQNTQLI
SWA
NT seq 1452 nt   +upstreamnt  +downstreamnt
gtgaacgccaacacttatattcctgagcactttattgacgacgtaaaaacctatttacct
gcgcacctcaatttagaagactttataaacgcgtgccgtcgccctttaagaaagtctatt
cgtgttaatacattaaaaataacaattgaagattttttaaaacgtgcggatcaaaaaaat
tggcaacttacacctataccctggtgcaatgagggtttttggctagaacgcccaagcgat
gaagaacaaaatttagcattaggcaataccgacctacatttaagtggcgctatgtatgtg
caagaggcaagctcaatgctgccgcctatggcactaaaacaaagtattgaaaactcagat
ttacaagatagttacgtacttgatatggcatcagcgcctggctctaaaacttcgcaactt
gccgcaataatgaataaccaaggcgtacttgttgccaacgaactttcgtcatcacgctta
aaagtccttagcgctacgcttaaacgtatgggcattggtaactgtgcgctttcgcatttt
gatggcgtcatatttggtaactatatgtttgaatgctttgatagcattttgcttgatgca
ccctgctctggcgaaggtaccgtacgtaaagacgccgatgcacttaaaaactggtcaata
gaatcaaatatagaaattgctcaagttcaaaaagatttaattaaaagcgctttttacgca
ttaaaaccaagcggtacactggtgtattcaacctgtacgctcaccccgctcgaaaaccaa
aaagtatgcgactacttgcttagcgaatttggcgactacattgagccgcaatcgctaagt
gatttatttcaaggggcagaaaaagcaacaaccgccgagggctatttacatgtgtggccg
caaacattcgacagtgaaggtttttttattgctaaatttaaaaaactcgcaagctgcaat
aatcctacccaaagcgttaaaaaaggcgcctttccgtttaacgagtttgataaaaaacaa
acaacatcatttatgagcgagcttaaaaaacaatttggtttaaaagccttgccgggtaat
ttaatgcagcgcgataaagaactgtggctattcccacaaggatttgaagccgtgcaaaat
aagattaaatacgcacgcttaggcatacaaataggcatcatccataaaaacggagtaagg
ctcacacacgagtttgctaccgtgtttggtaatgaatgcaaaagcaatacgtatgcttta
acaaacgagcaagcaaacgactactttaatggtaaagatatacgctttgaagaagtaaca
aaagccagcggcgaagtagtactaaccttatgtggctgcccgataggactaggcaaatgg
caaaaaaataagatcaaaaactctttgccacgcgatcttgtgcaaaatacccagttaata
agctgggcataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (8)   
   Pfam (8)   
All databases (16)   

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