KEGG T02514: W5S

Pectobacterium parmentieri SCC3193: W5S_0199

Entry

W5S_0199          CDS       T02514

Name

(GenBank) tRNA (uracil-5-)-methyltransferase

K00557

tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35]

Organism

pec Pectobacterium parmentieri SCC3193

Brite

KEGG Orthology (KO) [BR:pec00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:pec03016]
    W5S_0199
Enzymes [BR:pec01000]
2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.35  tRNA (uracil54-C5)-methyltransferase
     W5S_0199
Transfer RNA biogenesis [BR:pec03016]
Prokaryotic type
  tRNA modification factors
   Methyltransferases
    W5S_0199

SSDB

Motif

Pfam:

tRNA_U5-meth_tr Methyltransf_25 Methyltransf_4 Cons_hypoth95 MTS Methyltransf_11 Methyltransf_15 Methyltransf_31 PrmA Met_10 Methyltransf_12 DREV

Other DBs

NCBI-ProteinID:

AFI88338

UniProt:

A0A0H3HYT7

Position

complement(223764..224867)

AA seq 367 aa
MTPEILPIEDYDDQLAEKTERLRGMMAPFNAPEPVVFRSPVSHYRMRAEFRIWHDGDELY
HIMFDQQTKQRIRVDKFPAASELINRLMPELLAAIQPDSVLRRKLFQIDYLSTLSGEVIV
SLLYHRALNEEWQEHACALRDSLTAQGFNLQLIGRATKTKICLDRDYVDECLPVAGRNMI
YRQVENSFTQPNAAVNIKMLEWALDATASSKGDLLELYCGNGNFSLALARNFERVLATEI
AKPSVAAAQYNITANQIENVQIIRMAAEEFTQAMQGVRQFKRLQGIDLTSYQCETIFVDP
PRSGLDDETVKLVQAYPRILYISCNPETLSNNLQTLSETHDIRRLALFDQFPYTHHMECG
VLLEKRQ

NT seq 1104 nt +upstreamnt +downstreamnt
atgacgccagaaatcctgcccattgaagactatgacgaccagcttgcagagaaaacggag
cgtctgcgtggaatgatggcgcctttcaacgcgccggagcctgtcgtcttccgttctccc
gtcagccactatcggatgcgcgccgaattccgtatctggcacgatggtgacgagctttac
cacatcatgtttgaccagcagaccaaacaacgcatccgggtggataagttccctgctgct
agcgagctgataaatcgtctgatgccggaactgcttgccgccatccagcccgattccgtt
ctgcgccgcaaactgttccagatagactatctgtctaccttaagcggcgaagtgatcgtt
tcgctgttgtatcatcgcgcactgaacgaggaatggcaggagcacgcctgtgcactgcgc
gatagcctgacagcgcaagggttcaacctacagttgattggtcgcgcgacgaaaaccaaa
atctgcctcgatcgcgattatgtcgatgaatgcctgccggttgctggtcggaatatgatt
tatcgacaggtagaaaacagcttcacgcagccgaatgccgcagtaaatattaagatgctg
gaatgggcgctggatgcaacagcaagctcgaagggggatttactggagctatattgcggt
aatggcaatttttcactcgcgctggcaagaaacttcgagcgcgtgctggcgacggaaatc
gccaagccatccgtcgccgctgcgcaatataacatcaccgcgaatcagatagagaacgtg
cagattatccgcatggcggcagaagaatttacgcaggccatgcagggtgtacgtcagttt
aagcgcttacagggtatcgacctgacaagctaccagtgcgagaccatttttgttgacccg
ccgcgcagcggactggatgacgaaacggtgaaactggtgcaggcgtatccgcgtattctt
tatatttcctgcaacccggaaacgttgagcaataacctgcaaacgctatcggaaactcac
gacattcgccgtctggcgctgttcgatcaattcccttacacccatcatatggagtgtggc
gtgctgttggagaaacgtcagtaa

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (12)   
   Pfam (12)   
All databases (21)   

Download RDF

DBGET integrated database retrieval system