KEGG   Pectobacterium parmentieri SCC3193: W5S_0454
Entry
W5S_0454          CDS       T02514                                 
Name
(GenBank) DNA polymerase III, chi subunit
  KO
K02339  DNA polymerase III subunit chi [EC:2.7.7.7]
Organism
pec  Pectobacterium parmentieri SCC3193
Pathway
pec03030  DNA replication
pec03430  Mismatch repair
pec03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pec00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    W5S_0454
   03430 Mismatch repair
    W5S_0454
   03440 Homologous recombination
    W5S_0454
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pec03032]
    W5S_0454
   03400 DNA repair and recombination proteins [BR:pec03400]
    W5S_0454
Enzymes [BR:pec01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     W5S_0454
DNA replication proteins [BR:pec03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     W5S_0454
DNA repair and recombination proteins [BR:pec03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     W5S_0454
SSDB
Motif
Pfam: DNA_pol3_chi
Other DBs
NCBI-ProteinID: AFI88581
UniProt: A0A0H3HXI0
Position
complement(493361..493810)
AA seq 149 aa
MKNATFYLLEHDSKSGELSAHEVLACDLAAERWRAGKRVLIACEDEQQAIRLDEALWQRD
PNAFVPHNLAGEGPRHGAPVELAWPQRRGNAPRDLLISLLPQFADFATAFHEVIDFVPYE
ESLKQLARDRYKTYRSVGFQLTTATPPTH
NT seq 450 nt   +upstreamnt  +downstreamnt
atgaaaaacgcaacgttctatcttctcgaacacgacagcaaaagcggtgagctcagcgcc
catgaggtactggcatgcgatctggcggcagaacgttggcgagcaggaaaacgcgtgttg
attgcctgcgaagacgagcagcaggctatcaggctggatgaagcattatggcagcgcgat
cccaacgcgttcgtgccacataatctggctggcgaagggccgcgtcacggcgcaccggtc
gaactggcgtggccacaacggcgtggtaatgcaccacgtgacctgctgatcagcctattg
ccgcagttcgcagattttgccaccgctttccatgaagtgatagactttgtcccttacgaa
gaatccttaaaacagttggcgcgcgaccgctataaaacctatcgcagcgtcggcttccaa
ttgaccacggctacgccgccaactcactga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (14)   

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