KEGG   Pectobacterium parmentieri SCC3193: W5S_2049
Entry
W5S_2049          CDS       T02514                                 
Name
(GenBank) Holliday junction ATP-dependent DNA helicase ruvB
  KO
K03551  holliday junction DNA helicase RuvB [EC:5.6.2.4]
Organism
pec  Pectobacterium parmentieri SCC3193
Pathway
pec03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pec00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    W5S_2049
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pec03400]
    W5S_2049
Enzymes [BR:pec01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     W5S_2049
DNA repair and recombination proteins [BR:pec03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     W5S_2049
    RecFOR pathway proteins
     W5S_2049
SSDB
Motif
Pfam: RuvB_N AAA_lid_4 RuvB_C AAA AAA_5 AAA_3 TIP49 AAA_2 Rad17 nSTAND3 AAA_14
Other DBs
NCBI-ProteinID: AFI90138
UniProt: A0A0H3I5V2
Position
2231635..2232639
AA seq 334 aa
MIEADRLISADAIPEEEFLDRAMRPKLLKEYVGQPQVREQMEIFIQAARKRGDALDHLLI
FRPPGLGKTTLANIVANEMGVNMRTTSGPVLEKAGDLAALLTNLEPHDVLFIDEIHRLSP
VVEEVLYPAMEDYQLDIMIGEGPAARSIKLDLPPFTLIGATTRAGSLTSPLRDRFGIVQR
LEFYNVADLQYIVGRSAQCLGLDLTPEGSLEVARRARGTPRIANRLLRRVRDFSEVKSEG
AITGDVATQALDMLAVDTEGFDYMDRKLLLAIIDKFMGGPVGLDNLAAAIGEERETIEDV
LEPFLIQQGFIQRTPRGRMATQHAYRHFGLTREE
NT seq 1005 nt   +upstreamnt  +downstreamnt
atgatagaagccgatcgtttaatttccgctgacgctattcccgaagaagagtttctcgac
cgcgcgatgcggcctaagctgctgaaagagtatgtgggccagccgcaggtgcgtgagcag
atggaaattttcattcaagccgcccgcaaacggggagatgcgctggatcatctgctgatt
tttcggccccccggcctaggtaaaacgacgttggcgaatattgtcgccaatgagatgggc
gtgaatatgcggacaacgtctggtccggtgttggaaaaagctggcgaccttgctgcgctg
ttgaccaatctcgaaccgcatgatgtcttgttcatcgatgaaatccatcgcctgtcaccc
gtggtggaagaagtgttgtatccagcgatggaagattatcagttggatatcatgatcggt
gaagggccggcggcacgttcaattaaactcgatttaccccctttcacgctgattggcgcg
acgacgcgtgcggggtcgttaacctcgccgctgcgcgatcgctttggtattgtgcagcgt
ctggaattttataatgtggcggatttacagtacattgttggccgcagcgcacagtgcctg
gggctggatctgacgccggagggttcccttgaagtggcccgccgtgcgcgtggtacgccg
cgcattgctaaccggctgttgcgccgggtgcgcgatttctccgaggtgaaatcggaaggc
gcgattaccggagacgtggcgacgcaggcgctggatatgctggcggtggataccgaaggt
tttgactacatggaccgtaagctgctgttggcaatcatcgataaattcatgggtggcccg
gtcgggctggacaacttagccgcagcgattggcgaagagcgtgaaactattgaagatgta
ctggaaccgtttttgattcagcaagggttcattcagcgcacgccgcgtggtcgaatggcg
acgcagcatgcctatcggcattttggcttaacgcgcgaagaatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (11)   
   Pfam (11)   
All databases (21)   

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