KEGG   Pectobacterium sp. SCC3193: W5S_4539Help
Entry
W5S_4539          CDS       T02514                                 

Definition
Formamidopyrimidine-DNA glycosylase
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
pec  Pectobacterium sp. SCC3193
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:pec00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    W5S_4539
Enzymes [BR:pec01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     W5S_4539
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     W5S_4539
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
complement(4891600..4892409)
Genome map
AA seq 269 aa AA seqDB search
MPELPEVETSRRGISPYLVGHTIFYAEVRNSRLRWPVSAEILSLSDEPVLSVRRRAKYLL
IELTRGWIIVHLGMSGSLRVLPEYTEPEKHDHVDLVMDSGKVLRYTDPRRFGAWLWTDNL
ETCSVLAHLGPEPLEAEFSSDYLYQASRNKKTAIKQWIMDNKVVVGVGNIYASESLFAAG
IHPDRAAGSLNESDATVLVRVIKQVLQLSIEQGGTTLRDFLQSDGKPGYFAQELRVYGRS
GEPCRTCGTPIETAKHGQRSTFFCRCCQK
NT seq 810 nt NT seq  +upstreamnt  +downstreamnt
atgcctgaattacctgaggttgaaaccagtcgccggggaatttcaccctatctcgtcggc
cataccatcttttatgcagaagtgaggaattcgcgcctgcgctggccggtatcggctgaa
attctttcactaagcgatgagcctgtgctaagtgtgcgtcggcgggcaaaatacctgctg
attgagctcactcgtggctggattatcgtgcatcttggtatgtctggcagcctgcgggtg
ttgccggaatataccgaacctgaaaagcacgatcatgttgatttggtgatggacagcggt
aaagtgctgcgttacaccgatccccgacgttttggtgcctggctgtggacggataatcta
gaaacctgctcggtattggcacatctggggccggagccattagaggcggaattctcctcg
gattatctctatcaggcttcacgaaataaaaaaacggcgatcaaacagtggattatggat
aacaaagtggtggttggcgtaggtaatatttacgcaagcgaatcgttgtttgctgctggt
atccaccctgacagagcggccggatcgttaaatgaaagcgatgcaacggtattggttcgc
gtgattaaacaggtgctacagctttcgattgagcagggtggcacgacgctgcgtgacttt
ttgcaatcagatggtaagcccggttatttcgcgcaggagctacgagtctatggccgcagc
ggcgaaccttgccggacatgtgggacaccaatagaaaccgcgaaacatgggcagcgtagc
acttttttttgtcgctgctgtcagaagtaa

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