KEGG   Syntrophotalea acetylenivorans: A7E78_04320
Entry
A7E78_04320       CDS       T04594                                 
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
pef  Syntrophotalea acetylenivorans
Pathway
pef03410  Base excision repair
pef03430  Mismatch repair
pef03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pef00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    A7E78_04320
   03430 Mismatch repair
    A7E78_04320
   03440 Homologous recombination
    A7E78_04320
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pef03400]
    A7E78_04320
DNA repair and recombination proteins [BR:pef03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     A7E78_04320
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     A7E78_04320
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      A7E78_04320
SSDB
Motif
Pfam: RecJ_OB DHHA1 DHH MadL
Other DBs
NCBI-ProteinID: APG27126
UniProt: A0A1L3GMF2
Position
complement(956026..957477)
AA seq 483 aa
MDGITASALLVENLRSFGAPVDYYIPLRLVDGYGLSGEALQRAADSGAKVAVSVDCGVSA
HKEARLAKKLGLDLIITDHHQPPEQLPEALAVINPHRPDCAFPDKGLAGVGVAFMLLVAL
RSRLRQKGWFQDRPEPDLRCSLDLVALGTIADIAPLNGLNRILVKAGLTVLNQGQRPGIA
ALREVADVKEVNCGSVGFRLAPRLNAAGRLQDAAQGVGLLLEASPVKALESARQLDDCNR
QRQMIEQQTLEQALEQLAETYDPAQRSIVLADPEWHSGVIGIVASRLVERFYRPTVLIAV
ENGIGKGSARSIRGFHLYRALHDSQQHLSAYGGHEFAAGLSIPADNIDAFASTFETVAEK
ELSNDQLQPRHLFDQEVLLEELTPQTVAELERLAPFGVGNPQPLLVARQLRAQQVQILGD
KHLRFTALQGGYSQACIAFGMAERIDELAGEFDLLFTPGINEWRGRSSVQLKVKDLRAVE
SVL
NT seq 1452 nt   +upstreamnt  +downstreamnt
gtggatggcatcaccgccagcgccttgctggtggagaatttacgttcttttggagcgcct
gtagactactatattccattgcgactggtggatggatatggtctttccggcgaagctctg
caacgggctgcggacagtggtgccaaggtggcggtgtctgtcgattgcggggtgtcggct
cataaggaagctcgcctggccaaaaaactcggtctcgacctgatcatcaccgatcaccac
cagcctcccgaacagcttccggaagccctggcggtcatcaacccgcaccggccggactgt
gcctttcccgacaagggtctggcgggcgtcggggtggcttttatgctgttggtggccctg
cgcagtcgcctgcggcaaaagggctggtttcaggatcgtcccgaaccggacctgcggtgc
agcctcgatttggtggctctcggcaccatcgccgatatcgctcccttaaacggactcaac
cggattctggtcaaagccggcctgacagtactgaatcaggggcaacggccggggatcgcc
gcattaagagaagtcgccgatgtcaaagaggtcaattgcggcagcgtcggttttcgactg
gcccctcgcttaaacgccgccggtcgcttgcaggatgctgctcagggagtaggcctgctc
cttgaggcttccccggtcaaggccttggagagtgcccggcaactcgacgactgtaatcgc
cagcgccaaatgatcgaacagcaaaccctggaacaggctctggagcaacttgcggagacg
tatgatccggcgcagcgcagtatcgtcctcgccgaccccgaatggcactcgggagtcatc
ggcatcgttgccagtcgtctggtggaacgtttttaccggccgacggtgctcatagccgtt
gaaaatggcattggcaaggggtcggcccgctcaattcgcggttttcacctctatcgagcg
ttgcacgattctcagcagcatctgagcgcctatggaggccatgaattcgccgcaggttta
tcgatccctgccgacaatatcgatgccttcgccagcaccttcgagacggtggcggaaaaa
gaactgagtaacgatcagctacaaccgcgccatctgtttgatcaggaggtgctccttgaa
gaattgacaccacagacggtggccgagctagagcgcttggcccctttcggtgtcggtaac
cctcagccgctgttggtggctcgccagctacgcgctcaacaggtacagattcttggggat
aagcatctgcgttttaccgcccttcagggtggttacagtcaggcctgtattgccttcggc
atggcagagcggattgatgagctggccggggaattcgacctgctcttcaccccgggtatc
aacgaatggcgcggccgaagttccgtgcagctcaaagtaaaagacctccgtgccgtcgag
tcggttctgtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

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