KEGG   Candidatus Pelagibacter sp. IMCC9063: SAR11G3_00536
Entry
SAR11G3_00536     CDS       T01465                                 
Name
(GenBank) DNA polymerase III subunits gamma and tau
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
pel  Candidatus Pelagibacter sp. IMCC9063
Pathway
pel03030  DNA replication
pel03430  Mismatch repair
pel03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pel00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    SAR11G3_00536
   03430 Mismatch repair
    SAR11G3_00536
   03440 Homologous recombination
    SAR11G3_00536
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pel03032]
    SAR11G3_00536
   03400 DNA repair and recombination proteins [BR:pel03400]
    SAR11G3_00536
Enzymes [BR:pel01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     SAR11G3_00536
DNA replication proteins [BR:pel03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     SAR11G3_00536
DNA repair and recombination proteins [BR:pel03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     SAR11G3_00536
SSDB
Motif
Pfam: DNA_pol3_delta2 DNA_pol3_gamma3 DUF3646 AAA AAA_22 AAA_14 AAA_5 RuvB_N AAA_19 AAA_30 AAA_16 AAA_assoc_2 ResIII AAA_24 AAA_18 nSTAND3 Sigma54_activ_2 TsaE Zeta_toxin Glyco_tranf_2_5 NACHT
Other DBs
NCBI-ProteinID: AEA81011
UniProt: F2I3X3
Position
478781..480376
AA seq 531 aa
MSTAIQNAIEMDRVPNAYLLTGIRGVGKTTTARIIAKAINCNKKFGSEEKCSKEEYCHCE
AIVDSSHMDILEMDAASKTGIDDIREILESAQYLPASAKYKVFIIDEVHMLSKQAFNALL
KTLEEPPPHLKFILATTEVKKIPVTILSRCQRFDLRRIKMEEMQLFLRDIAIKEQAKVDD
KALAIIAKSSEGSVRDALSVLDQAIITFNLQDQDITEQNVRDMLGLADQSRVIELLSFIV
RGSQQDALREAEDIFDIGADPKLILQSMLEIIYLISRTKTFGKIENDLSVSESESILIKQ
ISDEIDLTYVSMLWHFTLKGIEELNSTPNPFLSFRMLLIRLAHLKNMPDPQLLLEEDDFD
NEIETETYNNTTGLKAEPLISKTQIKNTIQEKKEVPKIKPDTVNLASSTQEIHSFQELVD
LTNKHKEIELKFDLERNVRLVKFDQGKIDISFNESLSKDFIKNLSLKLNEWTGKRWMITL
SKAEGETSIYETKSQLKEETLKDIKQTEAYKKVLEAFPDAELIDVQEEDQK
NT seq 1596 nt   +upstreamnt  +downstreamnt
atgagcacggctatacaaaatgccatagaaatggatcgagttcccaatgcttatctgctt
acgggtatacgaggcgtaggcaaaaccaccacagctagaattattgctaaagcaattaac
tgtaataaaaaatttggaagtgaagagaagtgttctaaagaagaatattgtcattgcgag
gctattgtcgattctagtcatatggatattttggaaatggatgctgcctccaaaactgga
attgatgatataagagaaattttagagtcagcacagtatttgcctgcgagtgcaaaatat
aaagtttttatcatagatgaagttcacatgttatcaaaacaagctttcaatgctctgcta
aaaaccttagaagaaccaccgcctcatcttaaatttattttagcaaccactgaagtaaaa
aaaatacctgtcactattttatctagatgtcagagatttgatttacgtagaattaaaatg
gaggaaatgcagcttttcttaagagacattgccattaaagaacaagctaaagtagacgac
aaggcactagcgatcattgctaaatcttctgaaggatctgttcgtgatgccttgtccgtc
ttggatcaggcaattattactttcaatcttcaagatcaggacataacagaacaaaatgta
agagacatgctagggttagcagatcagtctagagtgatagagctactgtcttttattgta
agaggctcacaacaagatgcattaagagaagccgaggatatttttgatataggtgcagac
cctaagttaattttacaaagtatgttggaaattatctatctaatctctcgaacaaaaact
tttgggaagatagaaaatgatctcagtgtatctgagtcagaatctattttaattaaacaa
atatcagatgagattgatctaacgtatgtatcgatgctttggcacttcacccttaaaggt
attgaagaactaaattctacacccaatccttttctatcctttcgcatgcttcttattcga
ttggcccatttaaaaaatatgccagatcctcaacttttattagaagaggatgattttgat
aatgaaatagaaacagaaacctacaataatactacaggactcaaagcagagccgttgatt
tccaaaactcaaatcaagaacaccattcaagaaaaaaaagaagtacctaaaatcaagcct
gatacagtaaatttagcttccagcactcaagaaatacattcttttcaagagctagtagac
ttgactaacaagcataaagagattgaattgaaatttgatttagaaagaaatgtgcgtttg
gtaaaatttgatcaaggaaaaattgatatttcttttaatgaaagtttatcaaaagacttt
attaagaatctttctttaaagctaaatgagtggactggtaagcgatggatgattactttg
tccaaagcagaaggagaaacgagtatttatgaaacaaagagtcaattaaaagaagaaact
ttaaaagatattaaacagactgaggcttataaaaaagttttagaagcatttccagatgct
gaactaatagatgtacaagaggaggaccagaaataa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (21)   
   Pfam (21)   
All databases (34)   

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