KEGG   Pedobacter sp. PACM 27299: AQ505_07490
Entry
AQ505_07490       CDS       T04140                                 
Name
(GenBank) DNA polymerase III subunit epsilon
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
pep  Pedobacter sp. PACM 27299
Pathway
pep03030  DNA replication
pep03430  Mismatch repair
pep03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pep00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    AQ505_07490
   03430 Mismatch repair
    AQ505_07490
   03440 Homologous recombination
    AQ505_07490
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pep03032]
    AQ505_07490
   03400 DNA repair and recombination proteins [BR:pep03400]
    AQ505_07490
Enzymes [BR:pep01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     AQ505_07490
DNA replication proteins [BR:pep03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     AQ505_07490
DNA repair and recombination proteins [BR:pep03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     AQ505_07490
SSDB
Motif
Pfam: RNase_T GIY-YIG DEDDh_C GIY_YIG_2 R2K_2
Other DBs
NCBI-ProteinID: ALL05346
UniProt: A0A0N7JEL7
Position
complement(1766015..1767385)
AA seq 456 aa
MLYAVVDIETTGGHASGNGITEISILVHDGVSVVDSYETLINPGQFIPAHIEALTGISND
MVENSPMFHEVAEQIYNLLQNKIFVAHNVNFDFSFIRHNLSVAGYDLQCKKLCTVRLSRK
IIPGHASYSLGKLCAALKISLNNRHRAGGDAAATAELLSLLLANDSEGVIPASLKIGSKE
QALPPNLPKSQIDRLPLCPGVYYFKDQKGKVIYIGKAKSLKKRVCSHFTGNSTAKQRQNF
LKDIYTVDFEVCGTELMAFILEATEIKRLWPENNRAMKRYEQKYALYAFEDQKGYLRLGL
DTFKKNMPVLYSFNTILEGHHVLRILIKDHFLCEKLCYIQSKRLACTGHEEGNCSGACLG
KESAPAYNVRVKYAIEQLKTMLPSFAILDTGRTEEEQSCILVEQGKLYGMGYISPYTDVN
EPGMLKSALQPFPSNDYIMHLILNHTELYPQKRIPI
NT seq 1371 nt   +upstreamnt  +downstreamnt
atgctgtacgctgttgtagatatagaaaccactggtggtcatgcttcaggaaatggaatt
acagaaatttcaatcctggtgcatgacggcgtttctgtggtagattcgtatgaaacactg
atcaatcctggacaatttatcccagctcatattgaagccttaaccggcattagtaacgat
atggttgaaaattctccgatgtttcatgaagtagctgagcagatttacaacctgcttcag
aataaaatatttgtggcccacaatgtgaattttgacttttcttttatcaggcataacctc
tctgttgccggatatgacctgcaatgtaaaaagttatgtacggtaagattgagccgtaaa
atcatccctggacatgcctcttatagccttggaaaattgtgtgctgcattaaaaatttcg
ctgaataaccgccacagagcaggaggcgatgctgcagctactgcagaattattaagcctt
ttactggccaatgactcggaaggagtcatcccagcctccttaaaaatcggttctaaagaa
caggcactccctcctaacctccctaaatcccagatagatcgacttcctttatgtcctggt
gtctattactttaaagatcaaaaaggaaaagtcatctatatcggaaaagctaaaagtctg
aagaaaagagtctgttcccatttcacgggaaacagcacagcaaagcaacgtcagaacttt
ctaaaagacatatatacggtagattttgaggtttgcggcacagaactgatggcctttatc
ctggaagcaacggagatcaaaagactatggccggaaaacaatcgtgctatgaaacgctat
gagcagaaatatgcactctatgcttttgaagatcaaaaaggatacctgaggttagggctg
gatactttcaagaaaaacatgccggttttgtatagcttcaacaccattctggaaggacat
catgtactgagaattctcatcaaagaccattttctatgtgagaaactgtgttatattcaa
agtaaaagattagcttgtacaggtcatgaagaaggaaattgcagtggtgcctgcctggga
aaagaatcagcaccagcttataatgttcgcgtaaaatatgcaatagaacaactgaaaacc
atgctgccgagctttgctattttagatactggaagaacagaagaagaacaaagctgtatt
ctcgtggaacaaggaaagttatacggaatgggctatatttcgccatataccgatgtaaat
gaacccggaatgctaaaatcagctttgcagcctttcccttccaatgactacattatgcac
ttgatcctgaaccatactgaactgtatccgcagaaacgaattccaatctaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (18)   

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