KEGG   Candidatus Sodalis pierantonius: SOPEG_0889
Entry
SOPEG_0889        CDS       T03006                                 
Symbol
rfaD
Name
(GenBank) ADP-L-glycero-D-mannoheptose-6-epimerase
  KO
K03274  ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
Organism
pes  Candidatus Sodalis pierantonius
Pathway
pes00540  Lipopolysaccharide biosynthesis
pes01100  Metabolic pathways
pes01250  Biosynthesis of nucleotide sugars
Module
pes_M00064  ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:pes00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00540 Lipopolysaccharide biosynthesis
    SOPEG_0889 (rfaD)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01005 Lipopolysaccharide biosynthesis proteins [BR:pes01005]
    SOPEG_0889 (rfaD)
Enzymes [BR:pes01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.3  Acting on carbohydrates and derivatives
    5.1.3.20  ADP-glyceromanno-heptose 6-epimerase
     SOPEG_0889 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:pes01005]
 Core region
  SOPEG_0889 (rfaD)
SSDB
Motif
Pfam: Epimerase GDP_Man_Dehyd 3Beta_HSD RmlD_sub_bind NAD_binding_4 Polysacc_synt_2 ThiF NAD_binding_10
Other DBs
NCBI-ProteinID: AHF73307
UniProt: W0HLC4
Position
complement(902802..903722)
AA seq 306 aa
MIVVTGGAGFIGSNIVKALNQIGYNDILVVDNLKDGTKYANLVDLNITDYMDKEDFIASI
VAGDIDAVFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCMERTIPFLYASSAATYGGRT
ENFIEDRQYEQPLNVYGYSKFLFDQYVRALLPQAESQICGFRYFNVYGPREGHKGGMASV
AFHLNNQINAGENPKLFAGSEGFKRDFVYVGDVVAVNLWFWQNSVSGIFNCGTGRAESFQ
AVADAVLDYHKKGQLEYIPFPEKLKGRYQAYTQADLTQLRAAGYQQPFKTVAEGVAEYLR
WLNHNR
NT seq 921 nt   +upstreamnt  +downstreamnt
atgatagttgtcactggtggggccggttttatcggcagtaatatcgtcaaggcgttaaat
cagatcggctacaacgatattttggtggtggataacctgaaagacggcaccaaatatgcc
aatctggtcgacctcaatatcactgattatatggataaagaggatttcatcgccagtatc
gtcgccggcgatattgatgcggtatttcatgaaggcgcctgttcttccaccaccgagtgg
gacggcaagtacatgatggataacaattatcagtactctaaagaactgttgcactattgc
atggaacgcaccattcccttcctgtacgcctcttccgcggcaacttacggcggtcggacg
gaaaacttcattgaggatcggcagtacgaacagccgttgaatgtttacggctattccaaa
tttctcttcgatcagtatgtgcgtgcgctgttgccgcaggccgagtcgcaaatttgcggc
ttccgttatttcaatgtgtatggcccgcgcgaagggcataaaggcggcatggcgagcgtg
gccttccatttgaataaccaaatcaacgccggtgaaaatccaaaactgtttgccggcagc
gaaggtttcaaacgcgatttcgtctatgtgggcgacgtggtggcggtaaatctttggttc
tggcaaaacagcgtctcggggatttttaattgcggcaccggccgagcagaatctttccag
gccgtcgcggacgccgtgctggattatcataaaaaaggccaattagaatacattccgttc
cctgaaaaactgaaagggcgctatcaggcctacacccaggcggatctcacccagctacgc
gccgccggctatcagcaaccgtttaaaaccgtcgccgaaggggtcgcggaatatttacgc
tggttgaaccataaccgttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (3)   
   KEGG MODULE (1)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (24)   

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