#=GF ID   AAA_2
#=GF AC   PF07724.9
#=GF DE   AAA domain (Cdc48 subfamily)
#=GF AU   Studholme DJ
#=GF SE   PfamB-40 (Release 14.0)
#=GF GA   20.60 20.60;
#=GF TC   20.60 20.60;
#=GF NC   20.50 20.50;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 23193494 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Domain
#=GF WK   AAA_proteins
#=GF RN   [1]
#=GF RM   7646486
#=GF RT   A 200-amino acid ATPase module in search of a basic function. 
#=GF RA   Confalonieri F, Duguet M; 
#=GF RL   Bioessays 1995;17:639-650.
#=GF RC   A large extension of the family
#=GF RN   [2]
#=GF RM   9927482
#=GF RT   AAA+: A class of chaperone-like ATPases associated with the
#=GF RT   assembly, operation, and disassembly of protein complexes. 
#=GF RA   Neuwald AF, Aravind L, Spouge JL, Koonin EV; 
#=GF RL   Genome Res 1999;9:27-43.
#=GF DR   INTERPRO; IPR013093;
#=GF DR   PROSITE; PDOC00572;
#=GF DR   SCOP; 1nsf; fa;
#=GF DR   HOMSTRAD; AAA;
#=GF CC   This Pfam entry includes some of the AAA proteins not detected
#=GF CC   by the Pfam:PF00004 model.
#=GF SQ   20963
#=GS E6R0H1_CRYGW/605-770    AC E6R0H1.1
#=GS G2KQM0_MICAA/529-701    AC G2KQM0.1
#=GS G9WI55_9LACT/425-593    AC G9WI55.1
#=GS F4LJV4_TREBD/559-732    AC F4LJV4.1
#=GS H4V2K7_ECOLX/576-742    AC H4V2K7.1
#=GS A1ZK93_9BACT/54-136     AC A1ZK93.1
#=GS D3LWR5_9FIRM/105-304    AC D3LWR5.1
#=GS F7XRR3_TREPU/600-778    AC F7XRR3.1
#=GS D7IA21_9BACE/594-765    AC D7IA21.1
#=GS Q5P202_AROAE/490-651    AC Q5P202.1
#=GS F3UHQ7_STRSA/109-306    AC F3UHQ7.1
#=GS E6LI94_9ENTE/447-608    AC E6LI94.1
#=GS C1E0G3_MICSR/487-657    AC C1E0G3.1
#=GS G4D7J6_9GAMM/487-648    AC G4D7J6.1
#=GS B5FD85_VIBFM/592-759    AC B5FD85.1
#=GS C8UKJ1_ECO1A/170-329    AC C8UKJ1.1
#=GS B9PX74_TOXGO/762-927    AC B9PX74.1
#=GS D6ABZ5_STRFL/113-312    AC D6ABZ5.1
#=GS G6H8J7_9ACTO/609-771    AC G6H8J7.1
#=GS Q9LBU1_ECO57/1-78       AC Q9LBU1.1
#=GS B4U898_HYDS0/713-884    AC B4U898.1
#=GS F0RVB4_SPHGB/106-305    AC F0RVB4.1
#=GS E1QKU8_DESB2/110-315    AC E1QKU8.1
#=GS A6VJC8_METM7/303-478    AC A6VJC8.1
#=GS G8LT58_CLOCD/538-712    AC G8LT58.1
#=GS D0FMS9_ERWPE/170-329    AC D0FMS9.1
#=GS B5YSH8_ECO5E/486-647    AC B5YSH8.1
#=GS HSLU_ENT38/170-329      AC A4WG67.1
#=GS B9L5M3_NAUPA/48-117     AC B9L5M3.1
#=GS B7CYV3_BURPE/688-855    AC B7CYV3.1
#=GS CLPX_FUSNN/120-320      AC Q8RHJ9.1
#=GS C0EWV6_9FIRM/375-548    AC C0EWV6.1
#=GS F0SFE6_PLABD/615-783    AC F0SFE6.1
#=GS D7FDN2_HELP3/171-329    AC D7FDN2.1
#=GS D7VPI6_9SPHI/108-306    AC D7VPI6.1
#=GS F0AP50_NEIME/493-654    AC F0AP50.1
#=GS E5X2Q3_9BACE/569-742    AC E5X2Q3.1
#=GS CLPX_HYDS0/100-298      AC B4U6S1.1
#=GS Q5INX1_SHIFL/21-207     AC Q5INX1.1
#=GS I0NG48_SALET/110-311    AC I0NG48.1
#=GS CLPB_PASMU/595-758      AC Q9CKC0.1
#=GS E6HXH0_ENTFL/95-253     AC E6HXH0.1
#=GS F2J9E0_HELP9/596-758    AC F2J9E0.1
#=GS H4LSJ8_ECOLX/646-808    AC H4LSJ8.1
#=GS F8YBW8_ECOLX/642-804    AC F8YBW8.1
#=GS F9HF45_9STRE/109-306    AC F9HF45.1
#=GS H3S5X2_STAAU/600-766    AC H3S5X2.1
#=GS D6CTW4_THIS3/112-311    AC D6CTW4.1
#=GS G5EPS3_9MICC/598-760    AC G5EPS3.1
#=GS B5Y5I5_PHATC/709-876    AC B5Y5I5.1
#=GS F4XTU3_9CYAN/135-335    AC F4XTU3.1
#=GS D9NG68_STRPN/478-643    AC D9NG68.1
#=GS CLPX_HALOH/107-306      AC B8CY73.1
#=GS G0A458_METMM/596-760    AC G0A458.1
#=GS I0ALU9_9BACT/544-716    AC I0ALU9.1
#=GS F3LWZ4_ECOLX/486-647    AC F3LWZ4.1
#=GS CLPX_STRT1/108-305      AC Q5M0S4.1
#=GS F8Y1G0_STRAG/108-305    AC F8Y1G0.1
#=GS G9SSZ5_ENTFC/195-352    AC G9SSZ5.1
#=GS C4PNL6_CHLTZ/113-310    AC C4PNL6.1
#=GS B7S0Y0_9GAMM/165-324    AC B7S0Y0.1
#=GS C7CQ65_ENTFL/473-638    AC C7CQ65.1
#=GS G0JDH4_YERPE/595-762    AC G0JDH4.1
#=GS H0JFX8_9PSED/172-331    AC H0JFX8.1
#=GS C9TCV5_9RHIZ/596-760    AC C9TCV5.1
#=GS A5WTG5_MYCTF/544-716    AC A5WTG5.1
#=GS H4R2T3_ECOLX/596-760    AC H4R2T3.1
#=GS A4VTB8_STRSY/94-242     AC A4VTB8.1
#=GS H8C5H7_CAMJU/455-613    AC H8C5H7.1
#=GS E4AS95_PROAA/597-759    AC E4AS95.1
#=GS F5NRE6_SHIFL/110-311    AC F5NRE6.1
#=GS B9E3N1_CLOK1/484-646    AC B9E3N1.1
#=GS D1R8Z6_9CHLA/106-305    AC D1R8Z6.1
#=GS Q7M8Z7_WOLSU/47-130     AC Q7M8Z7.1
#=GS D2NG78_ECOS5/486-647    AC D2NG78.1
#=GS HSLU_LACDA/193-350      AC Q1G9V4.1
#=GS C6S7K7_NEIML/110-310    AC C6S7K7.1
#=GS H1LCP4_9LACO/117-316    AC H1LCP4.1
#=GS HSLU_BRAJA/159-320      AC Q89WN2.1
#=GS G6Z9Q9_VIBCL/170-329    AC G6Z9Q9.1
#=GS F4A200_MAHA5/106-305    AC F4A200.1
#=GS HSLU_DESHD/199-343      AC B8FRG8.1
#=GS F4HF58_GALAU/596-760    AC F4HF58.1
#=GS H3RNC3_9LACO/310-480    AC H3RNC3.1
#=GS H3W616_STAEP/198-353    AC H3W616.1
#=GS E3YLK9_9LIST/53-225     AC E3YLK9.1
#=GS F7VF97_9PROT/108-307    AC F7VF97.1
#=GS D7VUU9_9FLAO/558-732    AC D7VUU9.1
#=GS B7K4L1_CYAP8/536-711    AC B7K4L1.1
#=GS C8LCD8_STAAU/600-766    AC C8LCD8.1
#=GS C4FFH3_9BIFI/126-325    AC C4FFH3.1
#=GS C3XIV6_9HELI/53-190     AC C3XIV6.1
#=GS Q2LT90_SYNAS/198-346    AC Q2LT90.1
#=GS D4YLA9_9MICO/108-305    AC D4YLA9.1
#=GS C8L1P3_STAAU/536-708    AC C8L1P3.1
#=GS I0XMX4_9LEPT/112-314    AC I0XMX4.1
#=GS B9AB03_BORBG/196-335    AC B9AB03.1
#=GS B5RD71_SALG2/596-760    AC B5RD71.1
#=GS E8DFE2_SALMO/609-777    AC E8DFE2.1
#=GS E3JJ31_BUCAJ/115-316    AC E3JJ31.1
#=GS F4BNX0_CARS1/448-613    AC F4BNX0.1
#=GS E0DUP6_9RHIZ/498-659    AC E0DUP6.1
#=GS F4SW88_ECOLX/491-652    AC F4SW88.1
#=GS C6LJT0_9FIRM/614-780    AC C6LJT0.1
#=GS CLPX_ALCBS/112-312      AC Q0VQ89.1
#=GS CLPB_PROMM/602-767      AC Q7V8B1.1
#=GS F8DHE7_STREP/439-600    AC F8DHE7.1
#=GS Q12U12_METBU/600-765    AC Q12U12.1
#=GS H3HWC9_STRPU/209-308    AC H3HWC9.1
#=GS G6T1S6_STRPN/443-604    AC G6T1S6.1
#=GS C2QYX5_BACCE/132-330    AC C2QYX5.1
#=GS H0M274_SALMO/609-777    AC H0M274.1
#=GS G5LZ27_SALET/609-696    AC G5LZ27.1
#=GS I1IA07_BRADI/633-808    AC I1IA07.1
#=GS A6BZR4_9PLAN/179-340    AC A6BZR4.1
#=GS D5EPL1_CORAD/132-332    AC D5EPL1.1
#=GS D8RAY9_SELML/263-378    AC D8RAY9.1
#=GS E6IN95_ENTFL/469-634    AC E6IN95.1
#=GS F4A1L1_MAHA5/191-350    AC F4A1L1.1
#=GS CLPX_NOVAD/110-309      AC Q2G3T4.1
#=GS A6EH00_9SPHI/594-765    AC A6EH00.1
#=GS E9Z026_ECOLX/20-186     AC E9Z026.1
#=GS D3DFP5_HYDTT/59-127     AC D3DFP5.1
#=GS H6NWQ4_SALTI/596-760    AC H6NWQ4.1
#=GS F9C855_VIBCL/112-313    AC F9C855.1
#=GS F2YR48_BORBG/2-157      AC F2YR48.1
#=GS E6YJ17_BARC7/596-760    AC E6YJ17.1
#=GS E2V2Z6_MYCTU/523-695    AC E2V2Z6.1
#=GS A1IR76_NEIMA/487-648    AC A1IR76.1
#=GS H0K6S8_9PSEU/541-714    AC H0K6S8.1
#=GS E9VJZ3_ECOLX/486-647    AC E9VJZ3.1
#=GS D1TSH6_YERPE/610-777    AC D1TSH6.1
#=GS E8CAB7_SALMO/609-777    AC E8CAB7.1
#=GS H6P904_STRIC/109-306    AC H6P904.1
#=GS CLPC3_ORYSJ/644-818     AC Q53LY0.1
#=GS G6RTJ9_STRPN/478-643    AC G6RTJ9.1
#=GS F3ALW3_9FIRM/596-762    AC F3ALW3.1
#=GS G8Q7G0_PSEFL/72-251     AC G8Q7G0.1
#=GS D0DVF6_LACFE/109-308    AC D0DVF6.1
#=GS Q5IP37_SHIFL/21-220     AC Q5IP37.1
#=GS G6N3G2_STRPN/478-643    AC G6N3G2.1
#=GS D1B1T6_SULD5/170-327    AC D1B1T6.1
#=GS B9NME1_9RHOB/490-651    AC B9NME1.1
#=GS F5KR56_PSEAI/611-776    AC F5KR56.1
#=GS E3BGB3_9VIBR/596-760    AC E3BGB3.1
#=GS H1M2K6_9BACT/301-457    AC H1M2K6.1
#=GS D4WC05_BACOV/110-308    AC D4WC05.1
#=GS HSLU_ECO81/170-329      AC B7N2S2.1
#=GS I1GNZ6_BRADI/481-545    AC I1GNZ6.1
#=GS D1W2I3_9BACT/595-766    AC D1W2I3.1
#=GS B5RN33_BORDL/472-641    AC B5RN33.1
#=GS G0TJM9_MYCCP/544-716    AC G0TJM9.1
#=GS A7ZFK1_CAMC1/106-303    AC A7ZFK1.1
#=GS F8HBZ0_STRE5/539-711    AC F8HBZ0.1
#=GS D1D4T0_NEIGO/497-658    AC D1D4T0.1
#=GS D3L8B2_OENOE/440-608    AC D3L8B2.1
#=GS Q63WJ0_BURPS/489-650    AC Q63WJ0.1
#=GS I1B835_ECOLX/642-804    AC I1B835.1
#=GS H7JAR9_STRPN/110-307    AC H7JAR9.1
#=GS H5QBD2_ECOLX/486-647    AC H5QBD2.1
#=GS C0EU87_9FIRM/596-762    AC C0EU87.1
#=GS H7II73_STRPN/433-594    AC H7II73.1
#=GS C5AV75_METEA/500-661    AC C5AV75.1
#=GS H3L4Y9_KLEOX/488-649    AC H3L4Y9.1
#=GS A5VLL6_LACRD/546-718    AC A5VLL6.1
#=GS B7MIT2_ECO45/596-760    AC B7MIT2.1
#=GS H8JSB8_VIBCL/112-313    AC H8JSB8.1
#=GS B2DUQ5_STRPN/540-712    AC B2DUQ5.1
#=GS E8TWS3_ALIDB/113-312    AC E8TWS3.1
#=GS G0DYQ9_ENTAK/487-648    AC G0DYQ9.1
#=GS Q2SUD4_BURTA/616-786    AC Q2SUD4.1
#=GS C2TAA6_BACCE/537-709    AC C2TAA6.1
#=GS CLPX_NEOSM/104-301      AC Q2GD18.1
#=GS E5VGF1_9FIRM/110-309    AC E5VGF1.1
#=GS H5JDW4_ECOLX/110-311    AC H5JDW4.1
#=GS G6CEX1_LACCU/597-763    AC G6CEX1.1
#=GS H8AIZ7_CAMJU/197-355    AC H8AIZ7.1
#=GS B6BKC7_9PROT/109-306    AC B6BKC7.1
#=GS F4TSA5_ECOLX/486-647    AC F4TSA5.1
#=GS G2JH75_ACIBA/605-775    AC G2JH75.1
#=GS I1NXW8_ORYGL/694-864    AC I1NXW8.1
#=GS F7XXZ9_MOREP/110-311    AC F7XXZ9.1
#=GS D8IF56_BRAP9/272-470    AC D8IF56.1
#=GS Q3AF95_CARHZ/103-302    AC Q3AF95.1
#=GS Q1LS58_RALME/172-325    AC Q1LS58.1
#=GS I0T566_STRMT/540-712    AC I0T566.1
#=GS E5CSU3_9STAP/600-766    AC E5CSU3.1
#=GS CLPX_BORPD/111-310      AC A9IR50.1
#=GS D4YNA2_9MICO/607-769    AC D4YNA2.1
#=GS G2DWV1_9GAMM/169-329    AC G2DWV1.1
#=GS CLPB_YEREN/617-785      AC Q9F746.1
#=GS C9AMV8_ENTFC/599-765    AC C9AMV8.1
#=GS H8LI81_STRPN/110-307    AC H8LI81.1
#=GS CLPX_BORPA/111-310      AC Q7W8X1.2
#=GS CLPB_BLOFL/598-762      AC Q7VQF3.1
#=GS A6LR52_CLOB8/600-765    AC A6LR52.1
#=GS C2CJ78_9FIRM/525-698    AC C2CJ78.1
#=GS A1D544_NEOFI/159-433    AC A1D544.1
#=GS E6QGD1_9ZZZZ/168-328    AC E6QGD1.1
#=GS H3TJX0_PSEAE/170-329    AC H3TJX0.1
#=GS C1EC57_MICSR/677-854    AC C1EC57.1
#=GS Q0GYZ4_PLAVN/1-141      AC Q0GYZ4.1
#=GS D3KMB5_LISMN/417-582    AC D3KMB5.1
#=GS E4VKQ0_9HELI/170-328    AC E4VKQ0.1
#=GS H6KU43_TREPD/531-693    AC H6KU43.1
#=GS E9VNA6_ECOLX/596-760    AC E9VNA6.1
#=GS H3Z0B9_STAAU/536-708    AC H3Z0B9.1
#=GS H8K814_RICAC/170-336    AC H8K814.1
#=GS E5UPU5_9BACE/480-642    AC E5UPU5.1
#=GS HSLU_VIBVY/170-329      AC Q7MH56.2
#=GS E8BEG2_SALMO/596-760    AC E8BEG2.1
#=GS HSLU_PSEPF/169-327      AC Q3KJB6.1
#=GS E6IQ05_ENTFL/599-765    AC E6IQ05.1
#=GS Q14L03_SPICI/336-502    AC Q14L03.1
#=GS C0SQM4_LACBR/317-482    AC C0SQM4.1
#=GS E8Q630_BLOVB/127-327    AC E8Q630.1
#=GS B4T0G7_SALNS/486-647    AC B4T0G7.1
#=GS B2PSH2_ECO57/486-647    AC B2PSH2.1
#=GS G4T2X1_META2/638-806    AC G4T2X1.1
#=GS F5QMM1_SHIFL/596-760    AC F5QMM1.1
#=GS H7UQK9_CAMCO/108-302    AC H7UQK9.1
#=GS D6KA25_9ACTO/540-713    AC D6KA25.1
#=GS Q1GW44_SPHAL/597-761    AC Q1GW44.1
#=GS A1E6Y5_MYXXA/1-151      AC A1E6Y5.1
#=GS E9VVR5_ECOLX/170-329    AC E9VVR5.1
#=GS E4A4D0_PROAA/543-716    AC E4A4D0.1
#=GS B8Y3G4_9APIC/1-136      AC B8Y3G4.1
#=GS H7MJN4_STRPN/110-307    AC H7MJN4.1
#=GS H8AY98_CAMJU/49-124     AC H8AY98.1
#=GS F3H711_PSESX/598-736    AC F3H711.1
#=GS Q0S1V8_RHOSR/606-772    AC Q0S1V8.1
#=GS A8AIK8_CITK8/486-647    AC A8AIK8.1
#=GS D0WM50_9ACTO/541-714    AC D0WM50.1
#=GS HSLU_RICTY/170-336      AC Q68X52.1
#=GS C1MA73_9ENTR/600-764    AC C1MA73.1
#=GS C3HF97_BACTU/602-768    AC C3HF97.1
#=GS F8I7Q7_SULAT/69-268     AC F8I7Q7.1
#=GS F0MDH0_NEIMG/600-763    AC F0MDH0.1
#=GS C6EJZ8_ECOBD/596-760    AC C6EJZ8.1
#=GS CLPE_BACSU/437-603      AC O31673.1
#=GS Q9XEE5_ARATH/459-614    AC Q9XEE5.1
#=GS H8NKS7_RICTP/595-759    AC H8NKS7.1
#=GS H9K068_APIME/152-344    AC H9K068.1
#=GS D5W9U8_BURSC/175-334    AC D5W9U8.1
#=GS A0Z8I0_9GAMM/171-320    AC A0Z8I0.1
#=GS O06676_TREDN/104-268    AC O06676.1
#=GS Q01YP1_SOLUE/54-245     AC Q01YP1.1
#=GS B4FL89_MAIZE/71-241     AC B4FL89.1
#=GS H5B701_ECOLX/486-647    AC H5B701.1
#=GS C8K1T9_LISMN/197-355    AC C8K1T9.1
#=GS F9KNW0_STAAU/448-605    AC F9KNW0.1
#=GS E6MLP6_9BACT/568-747    AC E6MLP6.1
#=GS G4NSM5_BACPN/196-353    AC G4NSM5.1
#=GS A6V263_PSEA7/87-270     AC A6V263.1
#=GS CLPX_ECO81/110-311      AC B7MQF4.1
#=GS I0T850_STRMT/443-604    AC I0T850.1
#=GS B7I1Z9_ACIB5/605-775    AC B7I1Z9.1
#=GS Q96W69_CANAX/602-766    AC Q96W69.1
#=GS A0NT98_9RHOB/109-308    AC A0NT98.1
#=GS B4U1V5_STREM/479-644    AC B4U1V5.1
#=GS H5PU95_ECOLX/642-804    AC H5PU95.1
#=GS G2KUI5_LACSM/412-576    AC G2KUI5.1
#=GS E8PNA3_THESS/593-758    AC E8PNA3.1
#=GS Q2NVG6_SODGM/603-767    AC Q2NVG6.1
#=GS A5KZJ7_9GAMM/602-768    AC A5KZJ7.1
#=GS A7EN11_SCLS1/484-657    AC A7EN11.1
#=GS G2BCI0_ECOLX/596-760    AC G2BCI0.1
#=GS F0DCP6_STAAU/431-588    AC F0DCP6.1
#=GS B4X2E1_9GAMM/112-312    AC B4X2E1.1
#=GS D8G5A1_9CYAN/602-764    AC D8G5A1.1
#=GS E4Q227_CALOW/601-767    AC E4Q227.1
#=GS E3C3Y9_9LACO/535-706    AC E3C3Y9.1
#=GS G9WYC7_9FIRM/552-728    AC G9WYC7.1
#=GS E4IB59_ENTFC/599-765    AC E4IB59.1
#=GS HSLU_STAHJ/198-353      AC Q4L5V6.1
#=GS D5AEG2_PICSI/35-210     AC D5AEG2.1
#=GS G4QVU5_CORPS/97-296     AC G4QVU5.1
#=GS E5V535_9BACL/552-725    AC E5V535.1
#=GS H4C6E3_STAAU/199-353    AC H4C6E3.1
#=GS G4CEE4_9CLOT/106-305    AC G4CEE4.1
#=GS B4W8P7_9CAUL/109-308    AC B4W8P7.1
#=GS H0DNH2_STAEP/198-353    AC H0DNH2.1
#=GS H5T7Z8_9ALTE/111-312    AC H5T7Z8.1
#=GS H7EW40_PSEST/596-758    AC H7EW40.1
#=GS C8W5C9_DESAS/49-132     AC C8W5C9.1
#=GS C5CCZ7_MICLC/601-763    AC C5CCZ7.1
#=GS G6L0G4_STRPN/540-712    AC G6L0G4.1
#=GS H5UZ54_ESCHE/609-776    AC H5UZ54.1
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