GenomeNet

Database: Pfam
Entry: Amidase02_C
LinkDB: Amidase02_C
Original site: Amidase02_C 
#=GF ID   Amidase02_C
#=GF AC   PF12123.5
#=GF DE   N-acetylmuramoyl-l-alanine amidase
#=GF AU   Mistry J, Gavin OL
#=GF SE   pdb_2ir9
#=GF GA   28.20 28.20;
#=GF TC   37.80 43.50;
#=GF NC   25.30 24.00;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 11927849 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Domain
#=GF WK   N-acetylmuramoyl-L-alanine_amidase
#=GF DR   INTERPRO; IPR021976;
#=GF CC   This domain is found in bacteria and viruses. This domain is
#=GF CC   about 50 amino acids in length. This domain is classified with
#=GF CC   the enzyme classification code EC:3.5.1.28. This domain is the C
#=GF CC   terminal of the enzyme which hydrolyses the link between
#=GF CC   N-acetylmuramoyl residues and L-amino acid residues in certain
#=GF CC   cell-wall glycopeptides.
#=GF SQ   10
#=GS Q81CE8_BACCR/228-273  AC Q81CE8.1
#=GS Q81CE7_BACCR/199-242  AC Q81CE7.1
#=GS A7GSQ4_BACCN/225-270  AC A7GSQ4.1
#=GS A7GPG5_BACCN/224-268  AC A7GPG5.1
#=GS Q81CY6_BACCR/222-269  AC Q81CY6.1
#=GS C2WZZ2_BACCE/202-245  AC C2WZZ2.1
#=GS Q81YZ2_BACAN/221-264  AC Q81YZ2.1
#=GS Q81PJ7_BACAN/224-267  AC Q81PJ7.1
#=GS Q81WA9_BACAN/190-233  AC Q81WA9.1
#=GS Q81QH9_BACAN/201-244  AC Q81QH9.1
Q81CE8_BACCR/228-273             ..KLGYTSKIISRGDnqGLVYFETDYRQGNELDKATAWLDTK...GIKYFY.
Q81CE7_BACCR/199-242             da--GIDGQIVVQKD..GIGYAITNGYPSGNIDKFTAWLDAR...KWYYEY.
A7GSQ4_BACCN/225-270             ..ALGYESRIISYGDkqGLVRFETAYRQGNELDRATAWLDAK...GIDYVY.
A7GPG5_BACCN/224-268             ..ERNIKASIIFEGK.nGNPYVLTEKMSNPEMDKFTAWLDER...GWYYEY.
Q81CY6_BACCR/222-269             ..ERGIKGKVISDPL.tGVAYLETEVLPNTELDKITWWMDNRpggKWFYEY.
C2WZZ2_BACCE/202-245             .s-VKMTGNLILRSD..GYVYPVTDPTSDTQLKAFTDYLDRK...GWAYT-v
Q81YZ2_BACAN/221-264             ..SLKMTAKFILKPD..GLTYFISDPTSDAQLNAMKEYLDRK...GWWYEV.
Q81PJ7_BACAN/224-267             ..SLKMTATFILQSD..GLTYFVTEPTSDTQLNALKSWLDRK...GWWYEV.
Q81WA9_BACAN/190-233             ..SLNMTGKAIINPE..GLTYIVTDPTSDVQLQAFKEYLERK...DWWYD-d
Q81QH9_BACAN/201-244             ..SLKMTANFILQSD..GLTYFISEPTSDAQLKGMTDYLDRR...GWWYEV.
#=GC seq_cons                    ..pLshTuplIlpuD..GLsYhlT-spSsspLcthTsWLDcK...GWaYEh.
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