GenomeNet

Database: Pfam
Entry: Arc_PepC
LinkDB: Arc_PepC
Original site: Arc_PepC 
#=GF ID   Arc_PepC
#=GF AC   PF06819.9
#=GF DE   Archaeal Peptidase A24 C-terminal Domain
#=GF AU   Yeats C
#=GF SE   Yeats C
#=GF GA   21.20 21.20;
#=GF TC   21.90 21.60;
#=GF NC   20.90 20.30;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 17690987 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Domain
#=GF DR   INTERPRO; IPR009639;
#=GF CC   This region is of unknown function but is found in some archaeal
#=GF CC   Pfam:PF01478. It is predicted to be of mixed alpha/beta
#=GF CC   secondary structure by JPred.
#=GF SQ   21
#=GS C5A5I8_THEGJ/261-372      AC C5A5I8.1
#=GS F6D3R7_METPW/247-358      AC F6D3R7.1
#=GS F0T697_METLA/244-355      AC F0T697.1
#=GS R5CD34_9FIRM/19-96        AC R5CD34.1
#=GS F0LGY6_THEBM/230-341      AC F0LGY6.1
#=GS A6UVJ3_META3/209-318      AC A6UVJ3.1
#=GS Q5JED9_THEKO/255-365      AC Q5JED9.1
#=GS H3ZL04_THELN/226-337      AC H3ZL04.1
#=GS U6EBB7_9EURY/239-351      AC U6EBB7.1
#=GS Q8TXH1_METKA/210-291      AC Q8TXH1.1
#=GS A0A0G0BA46_9BACT/233-343  AC A0A0G0BA46.1
#=GS D5VTU3_METIM/205-305      AC D5VTU3.1
#=GS Y83C_METJA/207-313        AC P81324.1
#=GS Q8U3J5_PYRFU/254-362      AC Q8U3J5.1
#=GS Q9UYC0_PYRAB/251-359      AC Q9UYC0.1
#=GS E3GY43_METFV/228-338      AC E3GY43.1
#=GS R9SJ33_9EURY/155-249      AC R9SJ33.1
#=GS D7DUR7_METV3/205-310      AC D7DUR7.1
#=GS A0A0B5HU84_9ARCH/228-343  AC A0A0B5HU84.1
#=GS Y421_METTH/240-350        AC O26521.1
#=GS Q6M0N8_METMP/209-316      AC Q6M0N8.1
C5A5I8_THEGJ/261-372                 ..................k-LAVVLYLFKVFFSVVRVLREEALVEEVTVEELGEWDILGETIYIE-NGEVRRER.SGFFELLV..RAIKEGDLSVLT...SPvrG....EVIASPTAE.GLSREQIEKLKALVEEGKIENRF--l........
F6D3R7_METPW/247-358                 ..................f-LMISLTVIEIIKKLLTTVSREALQDDYNISELREGMIPAYNLYEK-YDKVYTDD.KSFLSKFK..EAMKTGDVTGLT...AP.kG....KLLISTMAA.GLTDKDVELLEDLLNKGKINDSFRV.........
F0T697_METLA/244-355                 ..................f-LFISINVIEIIKKLLTSVSKQALEEDYKIDELKEGMIPAYNLYEN-DDEIYEDK.STFFGRLK..QGISSGDVSKLN...GP.qD....KLIISTMAA.GLNTENIEYLKELRDKKKMKDNLKV.........
R5CD34_9FIRM/19-96                   ..............atsve---------------------------------KSGEILGDLVRK---GELTVEQgKALNQELK..HNAE-EKKKQVE...AQ.kK....EKNISDLVA.GLSAEDLEKLKA-------------qiakaeeem
F0LGY6_THEBM/230-341                 ..................k-LLVIFYIFKVFFSLTKVLREEILIERKPIEELKEWDILGEWIYEK-NGEILRDR.ESFTDKFK..KALVAGNLSLLK...LS.yE....NVIASPTAE.GLTKEQIEKLKKLVEEGRLENEFI-v........
A6UVJ3_META3/209-318                 ...................QFLVYVGELSLISIVIYALTGAEISSKKLVKDLKEGDILRDIITIEGN-SVTVEG.ANILKRFK..LMVD-AEMGKNE...TE.nK....KILMTD-GE.GLYKEDLELLQKLHKEGKIPNELN-l........
Q5JED9_THEKO/255-365                 ..................k-VLATIYAVKVLLSTAKILRGKVLVEEVPVEELHEWDILGETIHEL-NGEVKRER.EGTIERFK..RALSTWDFSEIR...PK.vG....RVVASPTAE.GLTKEQIEELKKLVEEGKLENRF--l........
H3ZL04_THELN/226-337                 ..................k-LAATFYTFKVFFSLVKVLREEVLTKKVSANELKEWDILGEWIYEK-DGKIYRDR.ESSFDKVI..RALKTLNLNALR...VE.yD....KLIASPTAE.GLRKEDIETLKALVNEGKLEDEFVV.........
U6EBB7_9EURY/239-351                 ..................i-LFVSINIVKTVIKLLGSVSKKALQDDVPLDKLREGMIPAYNVYQQDDDEIFVDD.KSFTQKLK..ESFKNKDPSLIT...TP.qG....KRLVGTLAA.GLTDKDIDLLKKLNQEDKIPDEFRI.........
Q8TXH1_METKA/210-291                 .....valstafttyrwag-------------------------KERNVEELREGEIPLEIVVRTEEG------.TERVGRLK..GALL-VATGR--...--..A....EPVVVPSGD.GFTEEELEKLKRL------------gidr.....
A0A0G0BA46_9BACT/233-343             nfiiliiiwrlimgfftgg---------------ISELGRELFSKERNVKDLKPGMLLGELIEKK--EKITKEE.LKALKKQEniEIIKNKKSYYIK...KPktGfelnKFINEE-AE.GLTKEQIEKIR--------------gigi.....
D5VTU3_METIM/205-305                 ..................s-SIIYIFEIILIALVVYALAGAEISTKKKIDELKEGDILRDVIIFKDNDDVEVKN.LSLLGRIK..FMLENK------...-E..K....NYLLCD-GE.GLSEEDIEKLKKYK--DKIK-----eltv.....
Y83C_METJA/207-313                   ..................t-SIIYLCEIILISIVIYALTGVETSDKKHIEELKEGDILRDVIIIDKDG-VEVKN.LNIMKRIK..FLLE-HEIKENE...--..K....EIILTD-GE.GLSNEDIRKIKKLYMEGKIPDKLNV.........
Q8U3J5_PYRFU/254-362                 ..................r-LVIILYAFKLLLSSVKMLRKEVLTKVKRVEELKEGEVLGERILEV-GGKIVRDR.KDFFEKLN..EVLKSGKFEQIS...--..G....KEIAGFSVE.GLTKEQIEELKKLVSEGKLENEFLV.........
Q9UYC0_PYRAB/251-359                 ..................k-MFLVIYSFKLIWSAVKALRREVLIEERKVSELNPGDVLGERIILTSD-GVVRDR.ADFFEKIS..STLKGEKVESLE...--..G....EEIAGFSVE.GLTQEQIEKLKALVSEGKLEDEFLV.........
E3GY43_METFV/228-338                 ..................s-IFITLLIFSFLLNFFTRIVTEALRDDVKVEDLKEGMILAYDLVEK-NGKIFFDS.KPLKEKIK..ECLRMGNIGPII...NP..G....RILIKSMAA.GLSEKDIKLLEKLVKEKKLENKIKI.........
R9SJ33_9EURY/155-249                 ..ilffnlirstnsfstyi---------------------------KEINQLREGMILDTIIFTNKD--QFIEI.KNIIENKK..DSNLSC---KIK...DD..K....LYIKCESSA.GITDYDIQSLRELCNK-KIMD----krv......
D7DUR7_METV3/205-310                 ..................n-YAVYGLELSLLSVVIYALTGAEISIKKPISELKEGDIIRDIIIIN-GDNVSVNN.SSLFKRIK..IMFN-AQIGKIE...--..G....KVINLD-GE.GLSNEDIDLIKDLNSKGKITD----vni......
A0A0B5HU84_9ARCH/228-343             ........lmvflpllflf-----------LLLKLYFASREILAENVKITALEEGMISGETIVEE-KGKVKRLE.KAGIGTII..KHFRNNNVDAVRrliWP.sG....RILASSRAAgGLTEEQIRELKKLVNEKKLENKLAV.........
Y421_METTH/240-350                   ..................i-LWVSITVIQLIRKLLTSITREALQDTMGVDELKEGMILASTLYRK-GDEYYFDD.SSLLDRFR..TAARTGDVSALT...YR..G....EPVVSAMAA.GLREEEIETLRDLVSRGKIKDEFRI.........
Q6M0N8_METMP/209-316                 ..................s-FFVYIGQLSLISLVIYALTGAEISSKKQISDLKEGDIIRDIVTIKENGEVTVEN.ANILKRFK..HMIY-GEMGKLE...--..G....KSLMTD-GE.GLSDENLELLNKLQNEGKIGGELNV.........
#=GC seq_cons                        ..................t.hhl.lh.hpllh.hlhslptphlpcchplcELKEG-ILu-hIhpp.ssclhh-p.pshhc+lK..cslcsschstlp.......u....chlhss.u-.GLocEpIEpLKcLhpcsKlpsch...........
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