GenomeNet

Database: Pfam
Entry: Atu4866
LinkDB: Atu4866
Original site: Atu4866 
#=GF ID   Atu4866
#=GF AC   PF11512.5
#=GF DE   Agrobacterium tumefaciens protein Atu4866
#=GF AU   Pollington J
#=GF SE   pdb_2jmb
#=GF GA   25.00 25.00;
#=GF TC   26.00 27.10;
#=GF NC   24.70 23.90;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 11927849 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Family
#=GF DR   INTERPRO; IPR020955;
#=GF CC   Atu4866 is a protein with unknown function from Agrobacterium
#=GF CC   tumefaciens however the structure has been determined. Atu4866
#=GF CC   adopts a streptavidin-like fold and has a beta-barrel/sandwich
#=GF CC   which is formed by eight antiparallel beta-strands [1]. Atu4866
#=GF CC   has a potential ligand-binding site where is has a stretch of
#=GF CC   conserved residues on the surface [1].
#=GF SQ   53
#=GS A0A0B4X3L4_9RHIZ/28-103  AC A0A0B4X3L4.1
#=GS K4QVZ5_9ACTN/10-84       AC K4QVZ5.1
#=GS A0A068SSN1_RHIGA/47-121  AC A0A068SSN1.1
#=GS V6KEG5_STRNV/9-83        AC V6KEG5.1
#=GS G8AK26_AZOBR/47-121      AC G8AK26.1
#=GS B3KLZ5_RHIME/56-130      AC B3KLZ5.1
#=GS E3HMC8_ACHXA/41-115      AC E3HMC8.1
#=GS F4PEZ0_BATDJ/9-83        AC F4PEZ0.1
#=GS E6WXK1_PSEUU/72-146      AC E6WXK1.1
#=GS H5WZ82_9PSEU/22-84       AC H5WZ82.1
#=GS Q2IEG9_ANADE/3-77        AC Q2IEG9.1
#=GS D1BF61_SANKS/30-104      AC D1BF61.1
#=GS A9CH91_AGRFC/2-77        AC A9CH91.1
#=GS A9CH91_AGRFC/2-77        DR PDB; 2JMB A; 2-77;
#=GS I0GXZ0_ACTM4/44-117      AC I0GXZ0.1
#=GS Q93JG5_STRCO/13-87       AC Q93JG5.1
#=GS A4XWD6_PSEMY/28-102      AC A4XWD6.1
#=GS H2K6J8_STRHJ/9-83        AC H2K6J8.1
#=GS K0F965_9NOCA/4-78        AC K0F965.1
#=GS D7AWD4_NOCDD/166-240     AC D7AWD4.1
#=GS H5WZ80_9PSEU/168-242     AC H5WZ80.1
#=GS G0AES0_COLFT/3-78        AC G0AES0.1
#=GS Q05I42_XANOR/48-123      AC Q05I42.1
#=GS Q930M5_RHIME/7-81        AC Q930M5.1
#=GS D7C9M3_STRBB/176-250     AC D7C9M3.1
#=GS Q8P4I5_XANCP/50-125      AC Q8P4I5.1
#=GS I3TVM9_TISMK/29-103      AC I3TVM9.1
#=GS G2P575_STRVO/10-84       AC G2P575.1
#=GS D7A074_STAND/41-115      AC D7A074.1
#=GS A0A089LSZ8_9BACL/8-82    AC A0A089LSZ8.1
#=GS D2PLH2_KRIFD/48-122      AC D2PLH2.1
#=GS Q0C689_HYPNA/37-111      AC Q0C689.1
#=GS D7C9M4_STRBB/10-84       AC D7C9M4.1
#=GS F6ACY9_PSEF1/3-78        AC F6ACY9.1
#=GS C7PJM0_CHIPD/4-78        AC C7PJM0.1
#=GS S6AQB5_PSERE/8-82        AC S6AQB5.1
#=GS R4SRI2_AMYOR/1-72        AC R4SRI2.1
#=GS F5LLI7_9BACL/8-82        AC F5LLI7.1
#=GS D9T7J8_MICAI/46-120      AC D9T7J8.1
#=GS X4ZF00_9BACL/26-100      AC X4ZF00.1
#=GS H5X7Q9_9PSEU/30-104      AC H5X7Q9.1
#=GS G8Q439_PSEFL/8-82        AC G8Q439.1
#=GS A0A0A2U912_9BACL/13-87   AC A0A0A2U912.1
#=GS Q2KDH4_RHIEC/56-131      AC Q2KDH4.1
#=GS K4QX87_9ACTN/176-250     AC K4QX87.1
#=GS A0A0D5LS91_9RHIZ/4-78    AC A0A0D5LS91.1
#=GS A9CJT7_AGRFC/40-114      AC A9CJT7.1
#=GS A6VTQ5_MARMS/9-83        AC A6VTQ5.1
#=GS B0T4V8_CAUSK/8-74        AC B0T4V8.1
#=GS G2NS39_STREK/18-92       AC G2NS39.1
#=GS U5VZY8_9ACTN/1-69        AC U5VZY8.1
#=GS A0A0B4XW94_9PROT/37-111  AC A0A0B4XW94.1
#=GS F4CAF0_SPHS2/174-249     AC F4CAF0.1
#=GS C6WPE2_ACTMD/147-221     AC C6WPE2.1
A0A0B4X3L4_9RHIZ/28-103             ..........s-HSYTGMWVTDDGHVRHELLPSGRYVEARGKRERAYEGRYAVTGTHIEYWDDTGFTADGDFV.D.AnTLHHGGMVLRR....
K4QVZ5_9ACTN/10-84                  ..........p-HPYVGMWVTADGFIRQELLPNGRYDEARGKRQSAYTGRYTVTGNHIDYVDDTGFTATGDVR.D.G.VLFHEHLVLYR....
A0A068SSN1_RHIGA/47-121             ..........e-HPYAGMWVTEDNHIRHELLPNGRYVEARGTREKAYEGRYWVTGDHIDYKDDTGFTADGDFR.D.G.VLYHAGMVLRR....
V6KEG5_STRNV/9-83                   ..........p-HPYVGMWVTADGLIRQELRADGRYDEARGDRESAYTGAYTVTGDHIDYVDDTGFTATGDIR.D.G.VLHHEHLVLYR....
G8AK26_AZOBR/47-121                 ..........d-HPYAGLWVTEDGRVRHELLPNNRYVEARGSREKAYQGRYQVTGDHIDYWDDTGFTADGDFI.D.G.VLHHGGMILHR....
B3KLZ5_RHIME/56-130                 ..........n-HPYVGLWVTEDSYIRHELLPNGRYIEARGTRERAYEGRYQVTGTHIDYWDDTGFTADGDFI.D.G.VLHHAGMIFYR....
E3HMC8_ACHXA/41-115                 ..........n-HPYAGMWVTKDGRIRHNLLPSGRYDEARGEIESAYQGRYEVSGNHIEYWDDTGFTADGDFI.D.G.VLHHGGMILYR....
F4PEZ0_BATDJ/9-83                   ..........q-YSYVGMWMTKDRYIRHELLPNGRYDEARGNRKSAYQGSYTITSNYIEYIDDTGFTADGNFQ.N.G.ILYHAGMILYR....
E6WXK1_PSEUU/72-146                 ..........p-HPYVGMWVTDDGYIRHELRADGRYDEARGHLRSAYQGRYTISGNHVDYLDDSGFTADGEFI.N.G.VLHHGGMVLRR....
H5WZ82_9PSEU/22-84                  lvgehlvrgpg-----------------------RSRFAVVGAHGAYTGCYCVRGNRIRYLDDPCFWAFGELL.D.G.ALHHAGFVMIR....
Q2IEG9_ANADE/3-77                   ..........q-NKYVGMWVTADGYVRHELLPNGRYDEARGDRKSAYQGRYTLTGDHIDYVDDTGFTADGDFM.N.G.VLHHAGMVLCR....
D1BF61_SANKS/30-104                 .........gp--DWVGAWTDPSRGMTQHLSADGRYSETRGGRRDAYTGCFWAHRDWVAYLDDTGFWAFGQRA.D.D.VLHHARFVLRR....
A9CH91_AGRFC/2-77                   ...........QHPYVGIWVTADGRIRQELLPNGRYDEARGNRKSAYQGRYEVRGAHINYWDDTGFTADGDFV.S.AnELHHGGMTFYR....
#=GR A9CH91_AGRFC/2-77        SS    ...........SSSEEEEEETTTEEEEEETTEEEEEEEEEEEETTEEEEB-TTS-B--EE--SSSEEEETTEE.E.XXXXXXXXXXXXX....
I0GXZ0_ACTM4/44-117                 .........da--ALVGAWRSPDGTVQLRLHTDGTYAGAVAGRRQAARGTYDIKDGDVVLHDVSGLNTPVHVL.D.G.ELEMAG-----hrll
Q93JG5_STRCO/13-87                  .........na--DVVGTWVTADGHIRQELLPDGRYDEARGDRRSAYTGRYTVTGDHLDYVDDTGFTATGDLR.D.G.VLHHEHLVLYR....
A4XWD6_PSEMY/28-102                 ..........p-HPYVGMWVTDDGHVRHELLANGRYDEARGNRESAYQGSYRVTGNHIDYVDDTGFTADGEFI.D.D.VLYHGGMVLRR....
H2K6J8_STRHJ/9-83                   .........hv--DVVGMWVTADGHIRQELLPDGRYDEARGERASAYTGRYTVTGSHLDYVDDTGFTATGDIR.D.G.VLYHEHLVLY-p...
K0F965_9NOCA/4-78                   .........di--DVVGMWVTADGHIRQELRADGRYDEARGERRSAYTGRYTVTGTHLDYVDDTGFTATGDIR.D.G.VLYHEHLVLHR....
D7AWD4_NOCDD/166-240                ..........d-SPYLGMWIDETGFIHQELTADGRYDETRGGRPHAYQGSFWIEGDRIVYRDDLGFWAYGRFA.D.D.VLHHAGYVFHR....
H5WZ80_9PSEU/168-242                ..........e-QSRVGVWVDTDGFLHQELTADGRYDETRGGRPHAFQGSYWVDGNRIDYLDDLGFWAFGQFV.G.D.TLHHAGYTMHR....
G0AES0_COLFT/3-78                   ..........k-HSYVGMWVTKDGKIRQELLSNGRYDEARGAKKSMYQGRYEVKGNHVDYWDDTGFTADGAFVsN.D.ELHHGGMIFYR....
Q05I42_XANOR/48-123                 ..........a-HPYLGMRVTGDGRIRQALLPNGRYDEARGTRQSADQGRYEITGTPIEYWHDTGLTADGRFVtQ.D.ELHHGGMVFSR....
Q930M5_RHIME/7-81                   ..........s-HPYVGMWETTDGRIRHQLLPNGRYDEARGSRESAYRGRYEVSGNHIEYWDDTGFTADGDFV.D.D.VLHHAGMVLYR....
D7C9M3_STRBB/176-250                .........gs--PRVGVWIDVKDFLHQELTADGRYDETRGGRPHAYQGRYWIDGNRIDYLDDLGFWAYGEFQ.G.E.ELHHAGYVMK-l...
Q8P4I5_XANCP/50-125                 ..........h-HPYLGMWVTGDGRIRQELLPTGRYDEARGTRKSAYQGRYEVEGNRIQYWDDTGFTADGTFV.TaD.ELHHGGMVFYR....
I3TVM9_TISMK/29-103                 ..........p-HPYIGMWVTEDGRIRHELRADGRYVEARGSREAAYQGRYTITGDHIDYVDDTGFTADGDFV.D.G.VLYHAGMILYR....
G2P575_STRVO/10-84                  .........di--DVVGMWVTADGHIRQELRADSRYDEARGRRASAYTGRYSVTGSHIDYVDDTGFTATGDVR.N.G.VLYHEHLVLYR....
D7A074_STAND/41-115                 ..........g-HPYVGLWVTADRRVRHRLLPNGRYDEARGTRESAYRGRYEVTGNEIFYWDDTGFTADGVFI.D.G.VLPHGGMILHR....
A0A089LSZ8_9BACL/8-82               ..........p-HPYVGMWVTADGYIRHELLSNGRYDEARGNRKSAYQGSYTVEGDHIAYVDDTGFTADGDFR.E.G.VLYHAGMILYR....
D2PLH2_KRIFD/48-122                 ..........p-HPYVGMWVTADGRIRQELLPNGRYEEERDGRARAYTGRYTVTGTHLDYFDDLGFTATGDVR.D.G.VLYHEHLVLYR....
Q0C689_HYPNA/37-111                 ..........t-HPYAGMWVTGDGYIRHELLPDGRYDEARGTRQSAYQGRYEVRGNHIDYWDNTGFTADGEFI.D.G.VLHHGGMIFYR....
D7C9M4_STRBB/10-84                  ..........p-HPYVGMWVTADGFIRQELLPNGRYDEARGNRQSAYTGSYTVTGNHLDYVDDTGFTATGDVR.D.G.ILFHEHLVLYR....
F6ACY9_PSEF1/3-78                   ..........n-HPYVGMWVTDDGQIRHELLPNGRYDEARGTRESAYQGRYEVSGTHIDYWDDTGFTADGEFV.D.QnTLHHGGMIFRR....
C7PJM0_CHIPD/4-78                   ..........a-NKYVGMWVTRDGYIRHELLPNGRYDEARGNKKSAYQGSYIITGDHIDYKDDTGFTADGDFR.E.G.ILYHAGMVLYR....
S6AQB5_PSERE/8-82                   ..........q-NKYVGMWVTADGRIRHELLPGGRYDEARGSQKSAYQGRYWLEGDHIQYVDDTGFTADGEFR.N.N.VLYHAGMVLY-p...
R4SRI2_AMYOR/1-72                   ..........m----VGMWVTADGHIRQELRADGRYDEARGERRSAYTGRYTVTGNHLDYVDDTGFTATGDIR.D.G.VLHHEHLVLYR....
F5LLI7_9BACL/8-82                   ..........p-HPYVGMWVTKDGYIRHELLPNGRYDEARGKRKSAYQGRYTVVGDHIEYVDDTGFRADGDFR.D.S.VLYHAGMVLYR....
D9T7J8_MICAI/46-120                 ..........l-HPYVGMWVTADGHIRQELLPDGRYDEARGDRASAYTGRYEVTGEHIDYWDDSGFTADGRFD.G.D.VLHHGGYLFYR....
X4ZF00_9BACL/26-100                 ..........d-HPYLGMWVTKDGYIRHELLPNGRYDEARGNRKSAYQGRYTIAGDHIEYVDDTGFAADGDFR.D.G.ILYHAGMILYR....
H5X7Q9_9PSEU/30-104                 ..........p-HPFVGMWVTADGHIRQELRPDGRYDEARGNRKSAYTGSYTVTGNHIDYVDDTGFTATGDVR.D.G.VLYHEHLVLYR....
G8Q439_PSEFL/8-82                   ..........q-DKFVGLWVTADGVIRHRLLPGGRYDEARGLRESAYQGDYWLQDDHIEYHDDTGFTADGDFR.E.G.VLYHAGMVLYR....
A0A0A2U912_9BACL/13-87              ..........e-HPYVGMWVTKDGYIRHELLPDGRYDEARGNRQSAYQGRYVVDEDHIEYVDDTGFTADGDFK.D.G.VLYHAGMVLYR....
Q2KDH4_RHIEC/56-131                 ...........QHPYVGMWVTEDGRVRHELLPDNRYDEARGNREHAYRGRYEVTGTHIEYRDDTGFIADGDFV.D.DnTLHHGGMVLRR....
K4QX87_9ACTN/176-250                .........gs--PRVGVWIDRKDFLHQELIADGRYDETRGGRPHAYQGRYWIDGDRIDYLDDLGFWAYGEFQ.G.D.ELHHAGYVMK-l...
A0A0D5LS91_9RHIZ/4-78               .........gn--DFTGLWVTDDGHIRHELLPGGRYVEARGTRERAYEGSYVITGNHIDYRDDTGFSADGDFV.G.G.VLYHAGMILRR....
A9CJT7_AGRFC/40-114                 ..........n-HPYVGMWVTGDGHIRQELLPNGRYDEARGKRKSAYQGRYEVKGNHIDYWDDTGFTADGEFV.D.D.VLHHGGMIFYR....
A6VTQ5_MARMS/9-83                   ..........r-QSYSGMWMTADGYIRHELLPNNRYVEARGNIESAYEGRYRITGDDIEYWDDTGFTADGTFI.D.G.VLYHAGMILYR....
B0T4V8_CAUSK/8-74                   ........arr---VSGVWASADG-VALELRMDGRFEE-RHDDEIVFTGHYEMEGDDVRLFEDGGGLLIGRLT.E.G.RL---------sle.
G2NS39_STREK/18-92                  .........dv--DVVGMWVTADGHIRQELRADGRYDEARGNRPSAYTGRYTVTGSHLDYVDDTGFTATGDIR.D.G.VLFHEHLVLRK....
U5VZY8_9ACTN/1-69                   ...........------MWVTSDNHIRQELRADGRYDEARGTRASAYTGRYEVSGEHIDYWDDTGFTADGRFD.G.D.VLHHGGYLFYR....
A0A0B4XW94_9PROT/37-111             ..........p-HPYVGMWVTADGNIRQELLANGRYDEARGNRPSAYQGRYEISGNHIDYWDDTGFTADGYFE.D.G.VLYHAGMVMYR....
F4CAF0_SPHS2/174-249                ..........t-KGYIGMWVTADGHIRQELLPGNRYDEARGSRLSAYQGAYKVSGNEIFYRDDTGFTADGTFV.D.EnTLHHGGYIFYK....
C6WPE2_ACTMD/147-221                .........sg--PRLGTWTDKTQDVVQELTPDGRYTEARNGVQDAYQGAFWLTHDHIAYRDDLGFWAYGTFR.D.D.VLHHAHFTFRR....
#=GC SS_cons                        ...........SSSEEEEEETTTEEEEEETTEEEEEEEEEEEETTEEEEB-TTS-B--EE--SSSEEEETTEE.E.XXXXXXXXXXXXX....
#=GC seq_cons                       ..........s.psYVGMWVTsDGaIRpELLPsGRYDEARGsRcSAYpGRYpVoGsHI-YhDDTGFTADG-Fh.D.G.VLaHuGhlLaR....
//
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