GenomeNet

Database: Pfam
Entry: Cauli_DNA-bind
LinkDB: Cauli_DNA-bind
Original site: Cauli_DNA-bind 
#=GF ID   Cauli_DNA-bind
#=GF AC   PF03310.9
#=GF DE   Caulimovirus DNA-binding protein
#=GF AU   Mifsud W
#=GF SE   Pfam-B_3746 (release 6.5)
#=GF GA   21.00 21.00;
#=GF TC   21.00 21.40;
#=GF NC   20.90 20.90;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 80369284 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Family
#=GF DR   INTERPRO; IPR004986;
#=GF SQ   87
#=GS W8VYX0_9VIRU/4-124    AC W8VYX0.1
#=GS W8VV95_9VIRU/4-124    AC W8VV95.1
#=GS W8VLV5_9VIRU/4-124    AC W8VLV5.1
#=GS W8VVC2_9VIRU/4-124    AC W8VVC2.1
#=GS Q5J1S3_9VIRU/4-121    AC Q5J1S3.1
#=GS Q7THB6_9VIRU/1-120    AC Q7THB6.1
#=GS Q64FW7_9VIRU/4-40     AC Q64FW7.1
#=GS W8VMX4_9VIRU/4-124    AC W8VMX4.1
#=GS W8VLZ7_9VIRU/4-124    AC W8VLZ7.1
#=GS I0J9E5_9VIRU/1-95     AC I0J9E5.1
#=GS W8VMZ4_9VIRU/4-124    AC W8VMZ4.1
#=GS U5HK96_9VIRU/4-40     AC U5HK96.1
#=GS W8VMC2_9VIRU/4-124    AC W8VMC2.1
#=GS U5KPI8_9VIRU/4-124    AC U5KPI8.1
#=GS U5KPN5_9VIRU/4-124    AC U5KPN5.1
#=GS W8VN69_9VIRU/4-124    AC W8VN69.1
#=GS Q2QDB7_9VIRU/4-40     AC Q2QDB7.1
#=GS VAP_FMVD/1-115        AC P09522.1
#=GS W8VTD0_9VIRU/4-124    AC W8VTD0.1
#=GS S5FTN9_9VIRU/1-101    AC S5FTN9.1
#=GS U5KQU9_9VIRU/4-124    AC U5KQU9.1
#=GS U5HK95_9VIRU/4-40     AC U5HK95.1
#=GS U5HK92_9VIRU/4-124    AC U5HK92.1
#=GS A9UD02_9VIRU/1-101    AC A9UD02.1
#=GS J7HCY4_9VIRU/1-113    AC J7HCY4.1
#=GS W8VV38_9VIRU/4-124    AC W8VV38.1
#=GS U5HK93_9VIRU/4-40     AC U5HK93.1
#=GS C5WX78_SORBI/164-264  AC C5WX78.1
#=GS Q2QDB1_9VIRU/4-40     AC Q2QDB1.1
#=GS W8VTH1_9VIRU/4-124    AC W8VTH1.1
#=GS U5KQX8_9VIRU/4-124    AC U5KQX8.1
#=GS B2CXY3_9VIRU/1-122    AC B2CXY3.1
#=GS F5A7F9_9VIRU/1-101    AC F5A7F9.1
#=GS W8VN87_9VIRU/4-124    AC W8VN87.1
#=GS U5KNV0_9VIRU/4-124    AC U5KNV0.1
#=GS A9QKR5_9VIRU/3-119    AC A9QKR5.1
#=GS W8VN32_9VIRU/4-124    AC W8VN32.1
#=GS M1DQ90_SOLTU/1-120    AC M1DQ90.1
#=GS T1SGQ8_9VIRU/1-101    AC T1SGQ8.1
#=GS G3JWZ6_9VIRU/3-120    AC G3JWZ6.1
#=GS U5HK98_9VIRU/4-40     AC U5HK98.1
#=GS U5KPS7_9VIRU/4-124    AC U5KPS7.1
#=GS Q83159_9VIRU/4-124    AC Q83159.1
#=GS U5KQ57_9VIRU/4-124    AC U5KQ57.1
#=GS I1W6B3_9VIRU/4-124    AC I1W6B3.1
#=GS Q2QDC0_9VIRU/4-40     AC Q2QDC0.1
#=GS VAP_CAMVE/4-124       AC Q02967.1
#=GS Q83167_9VIRU/4-124    AC Q83167.1
#=GS VAP_CAMVN/4-124       AC Q00967.1
#=GS Q683K9_CERV/3-124     AC Q683K9.1
#=GS B2D1M8_9VIRU/1-124    AC B2D1M8.1
#=GS W8VYW3_9VIRU/4-124    AC W8VYW3.1
#=GS U5HK94_9VIRU/4-40     AC U5HK94.1
#=GS F2X5R7_9VIRU/1-101    AC F2X5R7.1
#=GS VAP_CAMVC/4-124       AC P03552.1
#=GS U5KPK8_9VIRU/4-124    AC U5KPK8.1
#=GS U5KQ39_9VIRU/4-124    AC U5KQ39.1
#=GS W8VN13_9VIRU/4-124    AC W8VN13.1
#=GS U5HKA0_9VIRU/4-40     AC U5HKA0.1
#=GS Q2QDB4_9VIRU/4-40     AC Q2QDB4.1
#=GS U5HK97_9VIRU/4-40     AC U5HK97.1
#=GS VAP_CAMVS/4-124       AC P03551.1
#=GS VAP_CAMVS/4-124       DR PDB; 3F6N A; 4-72;
#=GS VAP_CAMVS/4-124       DR PDB; 3K4T D; 4-70;
#=GS VAP_CAMVS/4-124       DR PDB; 3K4T B; 4-73;
#=GS VAP_CAMVS/4-124       DR PDB; 3F6N B; 4-75;
#=GS VAP_CAMVS/4-124       DR PDB; 3F6N D; 4-74;
#=GS VAP_CAMVS/4-124       DR PDB; 3K4T A; 4-71;
#=GS VAP_CAMVS/4-124       DR PDB; 3K4T C; 4-74;
#=GS VAP_CAMVS/4-124       DR PDB; 3F6N C; 4-74;
#=GS W8VNA5_9VIRU/4-124    AC W8VNA5.1
#=GS W8VM91_9VIRU/4-124    AC W8VM91.1
#=GS J9D742_EDHAE/3-59     AC J9D742.1
#=GS F2WW30_9VIRU/1-101    AC F2WW30.1
#=GS W8VTF4_9VIRU/4-124    AC W8VTF4.1
#=GS W8VYV6_9VIRU/4-124    AC W8VYV6.1
#=GS W8VMA9_9VIRU/4-124    AC W8VMA9.1
#=GS W8VV73_9VIRU/4-124    AC W8VV73.1
#=GS U5KQW4_9VIRU/4-124    AC U5KQW4.1
#=GS VAP_CERV/3-124        AC P05398.1
#=GS Q9WI34_9VIRU/4-124    AC Q9WI34.1
#=GS S5QF81_9VIRU/1-95     AC S5QF81.1
#=GS Q8JTA4_9VIRU/1-124    AC Q8JTA4.1
#=GS VAP_CAMVD/4-124       AC P03553.1
#=GS W8VYZ8_9VIRU/4-124    AC W8VYZ8.1
#=GS W8VYY4_9VIRU/4-124    AC W8VYY4.1
#=GS W8VMT5_9VIRU/4-124    AC W8VMT5.1
#=GS W8VTC3_9VIRU/4-124    AC W8VTC3.1
#=GS U5KNW7_9VIRU/4-124    AC U5KNW7.1
#=GS W8VYZ1_9VIRU/4-124    AC W8VYZ1.1
#=GS W8VV25_9VIRU/4-124    AC W8VV25.1
#=GS U5HK99_9VIRU/4-40     AC U5HK99.1
#=GS Q66160_9VIRU/4-124    AC Q66160.1
#=GS U5KQT3_9VIRU/4-124    AC U5KQT3.1
#=GS W8VYU9_9VIRU/4-124    AC W8VYU9.1
W8VYX0_9VIRU/4-124               .......................LNQIQKEVS.EILSDQKSMKMDIKAI...LELLGS..QN.P.....IKESLETVAAKIVND...LTKLINDCPCNKEILEALGNQP.............KDQLV.EQPKEK.......GKGLNLGK....YSYPNYGVGNEELGSSGNPKALTWP.FKAPA-g.....................
W8VV95_9VIRU/4-124               .......................LNQIQKEVS.EILSDQKSMKADIKAI...LDILGS..QN.P.....NKESLEAVAAKIVND...LTKLINDCPCNKEILEALGNQP.............KEQLI.EQPEEK.......GKGLNLGK....YSYPNYGVGNEELGSSGNPKALTWP.FKAPA-g.....................
W8VLV5_9VIRU/4-124               .......................LNQIQKEVS.EILSDLKSMKLDIKAI...LELLGS..QN.P.....TKESLETVAAKIVND...LTKIINDCPCNKEILEALGNQP.............KEQLI.EQPKEK.......GKGLNLGK....YSYPNYGVGNEELGSSGNPKALTWP.FKAPE-g.....................
W8VVC2_9VIRU/4-124               .......................LNQIQKEVS.EILSDQKSMKTDIKAI...LELLGS..QN.P.....NKESLEAVAAKIVND...LTKLINDCPCNKEILEALGNQP.............KEQLI.EQPKEK.......DKGLNFGK....YSYPNYGVGNEELGSSGNPKALTWP.FKAPA-g.....................
Q5J1S3_9VIRU/4-121               .......................LNQIQKEVS.QALEEIRSLKKDTEAI...LAKLGS..TE.P.....--NNLEAIAAKIIND...VTKVIRDCPCNKEILEAFAKQPe...........kKGEII.PSNKPG.......SSSSKLKK....YSYPNTGVGNSNLGSSENPKALTWP.F-----gs....................
Q7THB6_9VIRU/1-120               .....................mt---TIKDLA.ALIEGLREEISKLKAE...ITSKDT..GP.T.....DNTALESLGAKIIKE...LSDKMDKCECTERLKKELQEQPd...........kGKQIVsPDKQES......sTPSSNFTR....YSYPNWNVGNASLGSSGNPDALKWP.------pv....................
Q64FW7_9VIRU/4-40                .......................LNQIQKEVS.EILSDQKSMKMDIKAI...LDILGS..QN.P.....TK-------------...----------------------.............-----.------.......--------....-------------------------.------e.....................
W8VMX4_9VIRU/4-124               .......................LNQIQKEVS.EILSDQKSMKMDIKAI...LDILGS..QN.P.....NKESLEAVAAKIVND...LTKLINDCPCNKEILEALGNQP.............NEQLI.EQPKEK.......GKGLNLGK....YSYPNYGVGNEELGSSGNPKALTWP.FKAPA-g.....................
W8VLZ7_9VIRU/4-124               .......................LNQIQKEVS.EILSDQKSMKADIKAI...LELLGS..QN.P.....IKESLEAVAAKIVND...LTKLINDCPCNKEILEALGNQP.............KEQLI.EQPKEK.......GKGLNLGK....YSYPNYGVGNEELGSSGNPKALTWP.FKAPA-g.....................
I0J9E5_9VIRU/1-95                .............mgsvtqkter---------.-IYDEMLKMEERFSRL...-EQ-EQ..QD.H.....FSEKIDQASATLLAEirkIQSKLENCDCNKEILDALKAQD.............R----.------.......--------....-------------------------.------tkgkgsgsnladaldlanrspp
W8VMZ4_9VIRU/4-124               .......................LNQIQKEVS.EILSDQKSMKTDIKAI...LEILGS..QN.P.....NKGSLEAVAAKIVND...LTKLINDCPCNKEILEALGNQP.............KEQLI.EQPKEK.......GKGLNLGK....YSYPNYGVGNEELGSSGNPKALTWP.FKAPA-r.....................
U5HK96_9VIRU/4-40                .......................LNQIQKEVS.EILSDQKSMKMDIKAI...LDILGS..QN.P.....IKE------------...----------------------.............-----.------.......--------....-------------------------.------......................
W8VMC2_9VIRU/4-124               .......................LNQIQKEVS.EILSDQKSMKTDIKAI...LELLGS..QN.P.....IKESLETVAAKIVND...LTKLINDCPCNKEILEALGNQP.............KEQLI.EQPKEK.......GKGLNLGK....YSYPNYGVGNEELGSSGNPKALTWP.FKAPA-g.....................
U5KPI8_9VIRU/4-124               .......................LNQIQKEVS.EILSDQKSMKTDIKAI...LELLGS..QN.P.....IKESLEAVAAKIVND...LTKLINDCPCNKEILEALGKQP.............KDQLV.EQPKEK.......GKGLNLGK....YSYPNYGVGNEELGSSGNPKALTWP.FKAPA-r.....................
U5KPN5_9VIRU/4-124               .......................LNQIQKEVS.EILSDQKSMKSDIKAI...LELLGS..QN.P.....IKESLETVAAKIVND...LTKLINDCPCNKEILEALGKQP.............KDQLV.EQPKEK.......GKGLNLGK....YSYPNYGVGNEELGSSGNPKALTWP.FKAPA-g.....................
W8VN69_9VIRU/4-124               .......................LNQIQKEVS.EILSDQKSMKTDIKAI...LDILGS..QN.P.....NKESLEAVAAKIVND...LTKLINDCPCNKEILEALGNQP.............KEQLI.EQPKEK.......GKGLNLGK....YSYPNYGVGNEELGSSGNPKALTWP.FKAPA-g.....................
Q2QDB7_9VIRU/4-40                .......................LNQIQKEVS.EILSDQKSMKMDIKAI...LDILGS..QN.P.....NK-------------...----------------------.............-----.------.......--------....-------------------------.------e.....................
VAP_FMVD/1-115                   .......................MAATLSEIR.ELIQSLTKTANEIKAM...LERNSA..GK.P.....--TGIEEAAAKIIKD...IGDKIDQCECTKKIEEMLDQKQn...........aDTQIV.PTKQES.......---SGLVK....YSYPNWNVGNEELGSSGNPNAVKWP.---PR-k.....................
W8VTD0_9VIRU/4-124               .......................LNQIQKEVS.EILSDQKSMKMDIRAI...LDILGS..QN.P.....NKESLEAVAAKIVND...LTKLINDCPCNKEILEALGNQP.............KEQLI.EQPKEK.......GKGLNLGK....YSYPNYGVGNEELGSSGNPKALTWP.FKAPA-g.....................
S5FTN9_9VIRU/1-101               ..................msllk---------.--------LEELINKL...ILKIDG..LV.S.....-NENLEVIAAKIIKE...VLDEIGK--ISKQPLETEKS--.............ETEKS.EAKNE-.......--KRSFQK....YSFPNFNVGNPSLGSSKSPNALTWP.FG----stsn..................
U5KQU9_9VIRU/4-124               .......................LNQIQKEVS.EILSDQKSMKMDIKAI...LDILRS..QN.P.....NKESLEAVAAKIVND...LTKLINDCPCNKEILEALGNQP.............KEQLI.EQPKEK.......GKGLNLGK....YSYPNYGVGNEELGSSGNPKALTWP.FKAPA-g.....................
U5HK95_9VIRU/4-40                .......................LNQIQKEVS.EILSDQKSMKMDIKAI...LDILGS..QN.P.....NK-------------...----------------------.............-----.------.......--------....-------------------------.------e.....................
U5HK92_9VIRU/4-124               .......................LNQIQKEVS.EILSDQKSMKMDIKAI...LDILGS..QN.P.....NKESLEAVAAKIVND...LTKLINDCPCNKEILEALGNQP.............KEQLI.EQPKEK.......GKGLNLGK....YSYPNYGVGNEELGSSGNPKALTWP.FKAPA-g.....................
A9UD02_9VIRU/1-101               ...................msll---------.-------KLEELINKL...ILKLDS..LV.S.....-NENLEVIAAKIIKE...VLDEIDKL--SKQPLETEKS--.............ETEKS.EAKNE-.......--KRSFQK....YSFPNFNVGNPSLGSSKSPNALTWP.FG----stsn..................
J7HCY4_9VIRU/1-113               ....................msl-----AEIQ.KAIDQVKRLAEQIEKL...LES---..--.-.....SKTIVEASSAKVIQD...ITSKLEECHCNKEILDALKSHDsk........ekpETQIV.NSDKSP.......-STSSLQK....YSFPNEYVGNAELGSSGNPNAIVFP.------rr....................
W8VV38_9VIRU/4-124               .......................LNQIQKEVS.EILSDQKSMKTDIKAI...LELLGS..QN.P.....IKESLEAVAAKIVND...LSKLINDCPCNKEILEALGNQP.............KEQLI.EQPKEK.......GKGLNLGK....YSYPNYGVGNEELGSSGNPKALTWP.FKAPA-g.....................
U5HK93_9VIRU/4-40                .......................LNQIQKEVS.EILSDQKSMKSDIKAI...LELLGS..QN.P.....IKE------------...----------------------.............-----.------.......--------....-------------------------.------......................
C5WX78_SORBI/164-264             ....................qll----MTEVV.KLRQEQQNTKSDLQAM...EEKLQD..TE.Q.....KQQQMMAFMARVMQNpdfMRQLISQREMRKELEDAISKKR.............RRRIV.QGPEADs.....mGTGSSL--....-------------------------.------eqgsqvvfe.............
Q2QDB1_9VIRU/4-40                .......................LNQIQKEVS.EILSDQKSMKMDIKAI...LDILGS..QN.P.....NK-------------...----------------------.............-----.------.......--------....-------------------------.------e.....................
W8VTH1_9VIRU/4-124               .......................LNQIQKEVS.EILSDQKSMKADIKAI...LELLGS..QN.P.....IKESLETVAAKIVND...LTKLINDCPCNKEILEALGKQP.............KDQLV.EQPKEK.......GKGLNLGK....YSYPNYGVGNEELGSSGNPKALTWP.FKAPA-g.....................
U5KQX8_9VIRU/4-124               .......................LNQIQKEVS.EILSDQKSMKSDIKAI...LELLGS..QN.P.....IKESLETVAAKIVND...LTKLITDCPCNKEILEALGNQP.............KEQLI.EQPKEK.......GKGLNLGK....YSYPNYGVGNEELGSSGNPKALTWP.FKAPA-g.....................
B2CXY3_9VIRU/1-122               ....................mtt---------.---TNLKEIHDLIIQV...LEEIKS..LKkDindysKDSNNEAIAAKIITD...IAEQIKKCPCNKEILDVLKNSK.............DKQVI.PHQGKPdt...ssDKPSSLQK....YSYPNFRVGNEELGESKNPDSLRWP.------egfqkk................
F5A7F9_9VIRU/1-101               ....................msl---------.------LKIEELINKL...VLKIDS..LV.S.....-NENLEVIAAKIIKE...VLDEIDKI--SKQPLETEKS--.............ETEKS.EAKNE-.......--KRSFQK....YSFPNFNVGNPSLGSSKSPNALTWP.FG----stsn..................
W8VN87_9VIRU/4-124               .......................LNQIQKEVS.EILSDQKSMKADIKAI...LELLGS..QN.P.....IKESLEAVAAKIVND...LTKLINDCPCNKEILEALGNQP.............KGQLI.EQPKEK.......GKGLNLGK....YSYPNYGVGNEELGSSGNPKALTWP.FKAPA-g.....................
U5KNV0_9VIRU/4-124               .......................LNQIQKEVS.EILSDQKSMKSDIKAI...LELLGS..QN.P.....IKESLETVAAKIVND...LTKLINDCPCNKEILEALGNQP.............KEQLI.EQPKEK.......GKSLNLGK....YSYPNYGVGNEELGSSGNPKALTWP.FKAPA-g.....................
A9QKR5_9VIRU/3-119               ....................tla--T-IKEISdETLSLVKELLTMIKQI...IDRPKS..ST.Q.....-TELTEPIAAKIIKD...ISDKIDKCECAEKLKQELKAGK.............DMQVS.KPEEPE.......NLPKRIQK....YSYPNWGVGNESLGSSGNPKALEWP.------pk....................
W8VN32_9VIRU/4-124               .......................LNQIQKEVS.EILSDQKSMKMDIKAI...LDILGS..QN.P.....NKESLEAVAAKIVND...LTKLINDCPCNKEILEALGNQP.............KVQLI.EQPKEK.......GKGLNLGK....YSYPNYGVGNEELGSSGNPKALTWP.FKAPA-g.....................
M1DQ90_SOLTU/1-120               .......................---------.--------MDKKIDQI...LDLLRNkpQS.Q.....EIEKMEQIAAKIITD...IANKIDKCECNKEITELLKNKAginrsksagdlpkDDQIQ.KTPKEPe.....tKKPVQGWR....YKWPNYNVGNAELGSSGNPKAMRWP.E-----dldn..................
T1SGQ8_9VIRU/1-101               ..................msllk---------.--------LEELINKL...ILKIDG..LV.S.....-NENLEVIAAKIIKE...VLDEIGK--ISKQPLETEKS--.............ETEK-.SEPKN-.......-EKRSFQK....YSFPNFNVGNPSLGSSKSPNALTWP.FG----stsn..................
G3JWZ6_9VIRU/3-120               ....................tla--T-IKEISdETLSLVKELLTMIKQI...IDKPES..SI.Q.....-TELTEPIAAKIIKD...ISDKIDKCECAEKLKQELKAGK.............DMQVS.-KPEDPe.....kPSTKGFQN....YSYPNWGVGIESLRSSGNPKALEWP.------pk....................
U5HK98_9VIRU/4-40                .......................LNQIQKEVS.EILSDQKSMKMDIKAI...LDILGS..QN.P.....NK-------------...----------------------.............-----.------.......--------....-------------------------.------e.....................
U5KPS7_9VIRU/4-124               .......................LNQIQKEVS.EILSDQKSIKMDIKAI...LDILGS..QN.P.....NKESLEAVAAKIVND...LTKLINDCPCNKEILEALGNQP.............KEQLI.EQPKEK.......GKGLNLGK....YSYPNYGVGNEELGSSGNPKALTWP.FKAPA-g.....................
Q83159_9VIRU/4-124               .......................LNQIQKEVS.EILSDQKSMKADIKAI...LELLGS..QN.P.....IKESLEAVAAKIVND...LSKLINDCPCNKEILEALGNQP.............KEQLI.EQPKEK.......GKGLNLGK....YSYPNYGVGNEELGSSGNPKALTWP.FKAPA-g.....................
U5KQ57_9VIRU/4-124               .......................LNQIQKEVS.EILSDQKSMKMDIKAI...LDILGS..QN.P.....NKESLEAVAAKIVND...LTKLINDCPCNKEILEALRNQP.............KEQLI.EQPKEK.......GKGFNLGK....YSYPNYGVGNEELGSSGNPKALTWP.FKAPA-g.....................
I1W6B3_9VIRU/4-124               .......................LNQIQKEVS.EILSDQKSMKADIKAI...LELLGS..QN.P.....IKESLETVAAKIVND...LTKLINDCPCNKEILEALGNQP.............KEQLI.EQPKEK.......GKGLNLGK....YSYPNYGVGNEELGSSGNPKALTWP.FKAPA-g.....................
Q2QDC0_9VIRU/4-40                .......................LNQIQKEVS.EILSDQKSMKMDIKAI...LDILGS..QN.P.....IKE------------...----------------------.............-----.------.......--------....-------------------------.------......................
VAP_CAMVE/4-124                  .......................LNQIQKEVS.EILSDQKSMKSDIKAI...LELLGS..QN.P.....TKESLEAVAAKIVND...LTKLINDCPCNKEILEALGNQP.............KEQLI.EQPKEK.......GKGLNLGK....YSYPNYGVGNEELGSSGNPKALTWP.FKAPA-g.....................
Q83167_9VIRU/4-124               .......................LNQIQKEVS.EVRSVQKSMKADIKAI...LELLGS..QN.P.....TKESLEAVAAKIVND...LTKLINDCPCNKEILEALGNQP.............KEQLI.EQPKEK.......GKGLNLGK....YSYPNYGVGNEELGSSGNPKALTWP.FKAPA-g.....................
VAP_CAMVN/4-124                  .......................LNQIQKEVS.EILSDQKSMKSDIKAI...LEMLGS..QN.P.....IKESLEAVAAKIVND...LTKLINDCPCNKEILEALGNQP.............KEQLI.EQPKEK.......GKGLNLGK....YSYPNYGVGNEELGSSGNPKALTWP.FKAPA-g.....................
Q683K9_CERV/3-124                .......................LATIASEIE.VVKTNQKTIESKIDQI...LAKIGS..TP.E.....ESSNLESVAAKIISD...LTKEMKECHCNKEIVEILNK--.............DKAII.PSPERDs.....iQKKLSEPQ....YTFPNFDVGNEGMGSSTNPNALKWPpTEKPQP......................
B2D1M8_9VIRU/1-124               .............mttivelgak---------.-----LDALSQKVNEL...LKEKQ-..--.-.....-VDKTESAAAKIIKD...LSDRIEKDK--QELISLIKSCPcg........rhdDPKTP.PEPTKKgpeepgtSKDPNPPKpvipYSYPNWNVGDEAYGSSKGPNPPSWP.------pryt..................
W8VYW3_9VIRU/4-124               .......................LNQIQKEVS.EILSDQKSMKTDIKAI...LDLLGS..QN.P.....NKESLEAVAAKIVND...LTKLINDCPCNKEILEALGNQP.............KEQLI.EQPKEK.......GKGLNLGK....YSYPNYGVGNEELGSSGNPKALTWP.FKAPA-g.....................
U5HK94_9VIRU/4-40                .......................LNQIQKEVS.EILSDQKSMKMDIKAI...LDILGS..QN.P.....IKE------------...----------------------.............-----.------.......--------....-------------------------.------......................
F2X5R7_9VIRU/1-101               ...................msll---------.-------KIEELINKL...IQKLDG..LV.C.....-NENLEVIAAKIIKE...VLDEIGEI--SKQPLETEKS--.............ETEK-.SEPKN-.......-EKRSFQK....YSFPNFNVGNPSLGSSKSPNALTWP.FG----stsn..................
VAP_CAMVC/4-124                  .......................LNQIQKEVS.EILSDQKSMKSDIKAI...LELLGS..QN.P.....TKESLEAVAAKIVND...LTKLINDCPCNKEILEALGNQP.............KEQLI.EQPKEK.......GKGLNLGK....YTYPNYGVGNEELGSSGNPKALTWP.FKAPA-g.....................
U5KPK8_9VIRU/4-124               .......................LNQIQKEVS.EILSDQKSMKADIKAI...LELLGS..QN.P.....IKESLEAVAAKIVND...LTKLINDCPCNKEILEALGKQP.............KDQLV.EQPKEK.......GKGLNLGK....YSYPNYGVGNEELGSSGNPKALTWP.FKAPA-g.....................
U5KQ39_9VIRU/4-124               .......................LNQIQKEVS.EILSDQKSMKMDIKAI...LDILGS..QN.L.....NKESLEAVAAKIVND...LTKLINDCPCNKEILEALGNQP.............KEQLI.EQPKEK.......GKGLNLGK....YSYPNYGVGNEELGSSGNPKALTWP.FKAPA-g.....................
W8VN13_9VIRU/4-124               .......................LNQIQKEVS.EILSDQKSMKMDIKAI...LDILGS..QN.P.....NKESLEAVAAKIVND...LTKLINDCPCNKEILEALGNQP.............KEQLI.EQPKEK.......GKGLNLGK....YSYPNYRVGNEELGSSGNPKALTWP.FKAPA-g.....................
U5HKA0_9VIRU/4-40                .......................LNQIQKEVS.EILSDQKSMKMDIKAI...LDILGS..QN.P.....NK-------------...----------------------.............-----.------.......--------....-------------------------.------e.....................
Q2QDB4_9VIRU/4-40                .......................LNQIQKEVS.EILSDQKSMKMDIKAI...LDILGS..QN.P.....NK-------------...----------------------.............-----.------.......--------....-------------------------.------e.....................
U5HK97_9VIRU/4-40                .......................LNQIQKEVS.EILSDQKSMKMDIKAI...LDILGS..QN.P.....NK-------------...----------------------.............-----.------.......--------....-------------------------.------e.....................
VAP_CAMVS/4-124                  .......................LNQIQKEVS.EILSDQKSMKADIKAI...LELLGS..QN.P.....IKESLETVAAKIVND...LTKLINDCPCNKEILEALGTQP.............KEQLI.EQPKEK.......GKGLNLGK....YSYPNYGVGNEELGSSGNPKALTWP.FKAPA-g.....................
#=GR VAP_CAMVS/4-124       SS    .......................HHHHHHHHH.HHHHHHHHHHHHHHHH...HHHHHT..S-.-.....HHHHHHHHHHHHHHH...HHHHHHT-TTHHHHHHHHT---.............XXXXX.XXXXXX.......XXXXXXXX....XXXXXXXXXXXXXXXXXXXXXXXXX.XXXXX-X.....................
W8VNA5_9VIRU/4-124               .......................LNQIQKEVS.EILSDQKSMKTDIKAI...LELLGS..QN.P.....NKESLEAVAAKIVND...LTKLINDCPCNKEILEALGNQP.............KEQLI.EQPKEK.......GKGLNLGK....YSYPNYGVGNEELGSSGNPKALTWP.FKAPA-g.....................
W8VM91_9VIRU/4-124               .......................LNQIQKEVS.EILSDQKSMKADIKAI...LELLGS..QN.P.....IKESLEAVAAKIVND...LTKLINDCPCNKEILEALGNQP.............KEQLI.EQPKEK.......GKGLNLGK....YSYPNYGVGNEELGSSGNPKALTWP.FKAPA-g.....................
J9D742_EDHAE/3-59                drsvvevfkeikrhrkfepahek---------.----------------...------..--.-.....-----NSNAFEIIND...VKDFLKKCECIKDVFEFLIKK-.............-----.------.......--------....-------------------------.------wks...................
F2WW30_9VIRU/1-101               ..................msllk---------.--------LEELINKL...ILKIDG..LV.S.....-NENLEVIAAKIIKE...VLNEIGK--ISKQPLETEKS--.............ETEKS.EPKKE-.......--KRSFQK....YSFPNFNVGNPSLGNSKSPNALKWP.FG----stsn..................
W8VTF4_9VIRU/4-124               .......................LNQIQKEVS.EILSDQKSMKADIKAI...LDILGS..QN.P.....NKESLEAVAAKIVND...LTKLINDCPCNKEIIEALGNQP.............KEQLI.EQPKEK.......GKGLNLGK....YSYPNYGVGNEELGSSGNPKALTWP.FKAPA-g.....................
W8VYV6_9VIRU/4-124               .......................LNQIQKEVS.EILSDQKSMKSDIKAI...LELLGS..QN.P.....TKESLEAVAAKIVND...LTKLINDCPCNKEILEALGNQP.............KEQLI.EQPKEK.......GKGLNLGK....YSYPNYGVGNEELGSSGNPKALTWP.FKAPA-g.....................
W8VMA9_9VIRU/4-124               .......................LNQIQKEVS.EILSDQKSMKADIKAI...LELLGS..QN.P.....IKESLEAVAAKIVND...LTKLINDCPCNKEILEALGNQP.............NEQLI.EQPKEK.......GKGLNLGK....YSYPNYGVGNEELGSSGNPKALTWP.FKAPA-g.....................
W8VV73_9VIRU/4-124               .......................LNQIQKEVS.EILSDQKSMKTDIKAI...LEILGS..QN.P.....NKGSLEAVAAKIVND...LTKLINDCPCNKEILEALGNQP.............KEQLI.EQPKEK.......GKGLNLGK....YSYPNYGVGNEELGSSGNPKALTWP.FKAPA-g.....................
U5KQW4_9VIRU/4-124               .......................LNQIQKEVS.EILSDQKSMKADIKAI...LELIGS..QN.P.....IKESLEAVAAKIVND...LTKLINDCPCNKEILEALGKQP.............KDQLV.EQPKEK.......GKGLNLGK....YSYPNYGVGNEELGSSGNPKALTWP.FKAPA-g.....................
VAP_CERV/3-124                   .......................LATIASEIE.VVKTNQKTIESKIDQI...LAKIGS..TP.D.....ESSNLESVAAKIISD...LTKEMKECHCNKEIVEILNK--.............DKAII.PSPEQDs.....iQKRLSEPQ....YTFPNFDVGNEGMGSSTNPNALKWPpTEKPQP......................
Q9WI34_9VIRU/4-124               .......................LNQIQKEVS.EILSDQKSMKTDIKAI...LELLGS..QN.P.....IKESLEAVAAKIVND...LTKLINDCPCNKEILEALGKQP.............KDQLV.EQPKEK.......GKGLNLGK....YSYPNYGVGNEELGSSGNPKALTWP.FKAPA-g.....................
S5QF81_9VIRU/1-95                ....................msf---------.------VKIEEMIKEL...IKKVDA..LS.T.....-NDNLEVIAAKIIKD...VSDIIDN----KAF--VFEKQK.............EKIKI.EEKR--.......-----FQK....YSFPNFNVGNPSLGSSKSPNALKWP.FG----stsn..................
Q8JTA4_9VIRU/1-124               ....................mst----ISELA.VLIEELKKEVADLVTTvkdLAKDKS..PE.T.....DQNALKSLGAKIIKD...ISDKIDQCECTDKLFDRLKG--.............KGSVI.PTQQETp....evSEGAKYQK....YSWPNHNVGNPELGSSGVKNPVYWPpTS----fps...................
VAP_CAMVD/4-124                  .......................LNQIQKEVS.EILSDQKSMKADIKAI...LELLGS..QN.P.....IKESLETVAAKIVND...LTKLINDCPCNKEILEALGNQP.............KEQLI.GQPKEK.......GKGLNLGK....YSYPNYGVGNEELGSSGNPKALTWP.FKAPA-g.....................
W8VYZ8_9VIRU/4-124               .......................LNQIQKEVS.EILSDQKSMKTDIKAI...LELLGS..QN.P.....IKESLEAVAAKIVND...LTKLINDCPCNKEILEALGNQP.............NEQLI.EQPKEK.......GKGLNLGK....YSYPNYGVGNEELGSSGNPKALTWP.FKAPA-g.....................
W8VYY4_9VIRU/4-124               .......................LNQIQKEVS.EILSDQKSMKADIKAI...LDILGS..QN.P.....NKESLEAVAAKIVND...LTKLINDCPCNKEILEALGNQP.............KEQLI.EQPKEK.......GKGLNLGK....YSYPNYGVGNEELGSSGNPKALTWP.FKAPA-g.....................
W8VMT5_9VIRU/4-124               .......................LNQIQKEVS.EILSDLKSMKTDIKAI...LELLGS..QN.P.....AKESLETVAAKIVND...LTKLINDCPCNKEILEALGNQP.............KEQLI.EQPKEK.......GKGLNLGK....YSYPNYGVGNEELGSSGNPKALTWP.FKAPE-g.....................
W8VTC3_9VIRU/4-124               .......................LNQIQKEVS.EILSDQKSMKADIKAI...LDLLGS..QN.P.....IKESLESVAAKIVND...LTKLINDCPCNKEILEALGNQP.............KEQLI.EQPKEK.......GKGLNLGK....YSYPNYGVGNEELGSSGNPKALTWP.FKAPA-g.....................
U5KNW7_9VIRU/4-124               .......................LNQIQKEVS.EILSDQKSMKSDIKAI...LELLGS..QN.P.....IKESLETVAAKIVND...LTKLINDCPCNKEILEALGNQP.............KEQLI.EQPKEK.......GKGLNLGK....YSYPNYGVGNEELGSSGNPKALTWP.FKAPA-g.....................
W8VYZ1_9VIRU/4-124               .......................LNQIQKEVS.EILSDQKSMKTDIKTI...LELLGS..QN.P.....IKESLETVAAKIVND...LTKLINDCPCNKEILEALGKQP.............KDQLV.EQPKEK.......GKGLNLGK....YSYPNYGVGNEELGSSGNPKALTWP.FKAPA-g.....................
W8VV25_9VIRU/4-124               .......................LNQIQKEVS.EILSDQKSMKTDIKAI...LEILGS..QN.P.....IKESLETVAAKIVND...LTKLINDCPCNKEILEALGKQP.............KDQLV.EQPKEK.......GKGLNLGK....YSYPNYGVGNEELGSSGNPKALTWP.FKAPA-g.....................
U5HK99_9VIRU/4-40                .......................LNQIQKEVS.EILSDQKSMKTDIKAI...LELLGS..QN.P.....NK-------------...----------------------.............-----.------.......--------....-------------------------.------e.....................
Q66160_9VIRU/4-124               .......................LNQIQKEVS.EILSDQKSMKADIKAI...LELIGS..QN.S.....IKESLEAVAAKIVND...LTKLINDCPCNKEILEALGNQP.............KEQLI.EQPKEK.......GKGLNLGK....YSYPNYGVGNEELGSSGNPKALTWP.FKAPA-g.....................
U5KQT3_9VIRU/4-124               .......................LNQIQKEVS.EILSDQKSMKMDIKAI...LDILGS..QN.P.....NKESLEAVAAKIIND...LTKLINNCPCNKEILEALGNQP.............KEQLI.EQPKEK.......GKGLNLGK....YSYPNYGVGNEELGSSGNPKALTWP.FKAPA-g.....................
W8VYU9_9VIRU/4-124               .......................LNQIQKEVS.EILSDQKSMKSDIKAI...LELLGS..QN.P.....TKESLEAVAAKIVND...LTKLINDCPCNKEILEALGNQP.............KEQLI.EQPKEK.......GKGLNLRK....YSYPNYGVGNEELGSSGNPKALTWP.FKAPA-g.....................
#=GC SS_cons                     .......................HHHHHHHHH.HHHHHHHHHHHHHHHH...HHHHHT..S-.-.....HHHHHHHHHHHHHHH...HHHHHHT-TTHHHHHHHHT---.............XXXXX.XXXXXX.......XXXXXXXX....XXXXXXXXXXXXXXXXXXXXXXXXX.XXXXX-X.....................
#=GC seq_cons                    .......................LNQIQKEVS.EILSDQKSMKtDIKAI...L-lLGS..QN.P......KEuLEsVAAKIlND...LTKlIs-CPCNKEILEALusQP.............+cQll.EpPKEK.......uKGLNLsK....YSYPNYGVGNEELGSSGNPKALTWP.FctPt.u.....................
//
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