#=GF ID   Corona_NS1
#=GF AC   PF06145.6
#=GF DE   Coronavirus nonstructural protein NS1
#=GF AU   Finn RD
#=GF SE   Pfam-B_9242 (release 9.0)
#=GF GA   25.00 25.00;
#=GF TC   29.10 29.00;
#=GF NC   18.20 16.90;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 23193494 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Family
#=GF RN   [1]
#=GF RM   2142556
#=GF RT   Sequence and expression analysis of potential nonstructural
#=GF RT   proteins of 4.9, 4.8, 12.7, and 9.5 kDa encoded between the
#=GF RT   spike and membrane protein genes of the bovine coronavirus. 
#=GF RA   Abraham S, Kienzle TE, Lapps WE, Brian DA; 
#=GF RL   Virology 1990;177:488-495.
#=GF DR   INTERPRO; IPR009314;
#=GF CC   Bovine coronavirus NS1 encodes a 4.9 kDa protein [1].
#=GF SQ   37
#=GS A4ZU53_9BETC/1-29  AC A4ZU53.1
#=GS C6GHL4_9BETC/1-29  AC C6GHL4.1
#=GS NS49_CVBLY/1-30    AC Q9QAS1.1
#=GS B7U2N4_9BETC/1-29  AC B7U2N4.1
#=GS A3E2F3_9BETC/1-30  AC A3E2F3.1
#=GS Q0PL38_9BETC/1-29  AC Q0PL38.1
#=GS B7U2M3_9BETC/1-29  AC B7U2M3.1
#=GS NS49_CVBEN/1-29    AC Q91A25.1
#=GS C6GHQ0_9NIDO/1-29  AC C6GHQ0.1
#=GS A4ZU31_9BETC/1-29  AC A4ZU31.1
#=GS B7U2Q5_9BETC/1-29  AC B7U2Q5.1
#=GS NS49_CVBOK/1-29    AC Q9QAQ7.1
#=GS A4ZTX6_9BETC/1-29  AC A4ZTX6.1
#=GS B8RIQ8_9BETC/1-30  AC B8RIQ8.1
#=GS A4ZU42_9BETC/1-29  AC A4ZU42.1
#=GS A4ZU75_9BETC/1-29  AC A4ZU75.1
#=GS Q2QKN2_9BETC/1-18  AC Q2QKN2.1
#=GS B7U2L2_9BETC/1-29  AC B7U2L2.1
#=GS B7U2R6_9BETC/1-29  AC B7U2R6.1
#=GS Q6W363_9BETC/1-29  AC Q6W363.1
#=GS A7BKC3_9BETC/1-29  AC A7BKC3.1
#=GS B7TYH0_9BETC/1-29  AC B7TYH0.1
#=GS A4ZTZ8_9BETC/1-29  AC A4ZTZ8.1
#=GS A8HB17_9BETC/1-29  AC A8HB17.1
#=GS C6GHN8_9NIDO/1-29  AC C6GHN8.1
#=GS NS49_CVBLU/1-29    AC Q8V435.1
#=GS NS49_CVBON/1-29    AC P0C2R7.1
#=GS A4ZTY7_9BETC/1-29  AC A4ZTY7.1
#=GS NS49_CVBLS/1-29    AC Q9QAR4.1
#=GS D0EY74_9BETC/1-30  AC D0EY74.1
#=GS C6GHM6_9BETC/1-29  AC C6GHM6.1
#=GS A4ZU64_9BETC/1-29  AC A4ZU64.1
#=GS A4ZU20_9BETC/1-29  AC A4ZU20.1
#=GS A4ZU09_9BETC/1-29  AC A4ZU09.1
#=GS NS49_CVBM/1-29     AC P15778.1
#=GS NS49_CVBQ/1-29     AC Q77NC3.1
#=GS C6GHR1_9NIDO/1-29  AC C6GHR1.1
A4ZU53_9BETC/1-29             MKTKFVFDLLTPDDILHPSNHVNLI.IRPI..
C6GHL4_9BETC/1-29             MTTKFVFDLLAPDDILHPFNHVKLI.IRPI..
NS49_CVBLY/1-30               MTTKFVFDLLAPDDILHPFNHVKLIiIRPI..
B7U2N4_9BETC/1-29             MTTKFVFDLLAPDDILHPSNHVNLI.IRPI..
A3E2F3_9BETC/1-30             MTTKFVSDLLAPDDILHPSNHVKLIiIRPI..
Q0PL38_9BETC/1-29             MTTKFVFDLLAPDDILHPFNHVKLI.IRPI..
B7U2M3_9BETC/1-29             MTTKFVFDLLAPDDILHPSNHVNLI.IRPI..
NS49_CVBEN/1-29               MKTKFVFDLLTPDDILHPSNHVNLI.IRPI..
C6GHQ0_9NIDO/1-29             MTTKFVFDLLTPDDILHPSNHVNLI.IRPI..
A4ZU31_9BETC/1-29             MKTKFVFDLLTPDDILHPSNHVNLI.IRPI..
B7U2Q5_9BETC/1-29             MTTKFVFDLLAPDDILHPSNHVNLI.IRPI..
NS49_CVBOK/1-29               MTTKFVFDLLAPDDILHPSNHVNLI.IRLI..
A4ZTX6_9BETC/1-29             MKTKFVFDLLTPDDILHPSNHVNLI.IRPI..
B8RIQ8_9BETC/1-30             MTTKFVSDLLAPDDILHPFNHVKLIiIRPI..
A4ZU42_9BETC/1-29             MKTKFVFDLLTPDDILHPSNHVNLI.IRPI..
A4ZU75_9BETC/1-29             MKTKFVFDLLTPDDILHPSNHVNLI.IRPI..
Q2QKN2_9BETC/1-18             MTTKFVFDLLTLDDIV---------.----tl
B7U2L2_9BETC/1-29             MTTKFVFDLLAPDDILHPSNHVNLI.IRPI..
B7U2R6_9BETC/1-29             MTTKFVFDLLAPDDILHPSNHVNLI.IRPI..
Q6W363_9BETC/1-29             MTTKFVFDLLAPDDILHPFNHVKLI.IRPI..
A7BKC3_9BETC/1-29             MTTKFVFDLLAPDDILHPFNHVKLI.IRPI..
B7TYH0_9BETC/1-29             MTTKFVFALVAPDDTLHPFNHVKLI.IRPI..
A4ZTZ8_9BETC/1-29             MKTKFVFDLLAPDDILHPSNHVNLI.IRLI..
A8HB17_9BETC/1-29             MTTKFVFDLLAPDDILHPFNHVKPI.IRPI..
C6GHN8_9NIDO/1-29             MKTKFVFDLLTPDDILHPSNHVNLI.IRPI..
NS49_CVBLU/1-29               MKIKFVFDLLTPDDILHPSNHVNLI.IRPI..
NS49_CVBON/1-29               MKTKFVFDLLAPDDILHPSNHVNLI.IRLI..
A4ZTY7_9BETC/1-29             MKTKFVFDLLAPDDILHPSNHVNLI.IRLI..
NS49_CVBLS/1-29               MTTKFVFDLLAPDDILHPSNHVNLI.IRPI..
D0EY74_9BETC/1-30             MTTKFVFDLLAPDDILHPSNHVKLIiIRPI..
C6GHM6_9BETC/1-29             MKTKFVFDLLTPDDILHPSNHVNLI.IRPI..
A4ZU64_9BETC/1-29             MKTKFVFDLLTPDDILHPSNHVNLI.IRPI..
A4ZU20_9BETC/1-29             MXTKFVFDLLXPDDILHPSNHVNLI.IRPI..
A4ZU09_9BETC/1-29             MKTKFVFDLLAPDDILHPSNHVNLI.IRLI..
NS49_CVBM/1-29                MTTKFVFDLLAPDDILHPFNHVKLI.IRPI..
NS49_CVBQ/1-29                MTTKFVFDLLAPDDILHPFNHVKLI.IRPI..
C6GHR1_9NIDO/1-29             MTTKFVFALXAPDDTLHPFNHVKLI.IRPI..
#=GC seq_cons                 MpTKFVFDLLAPDDILHPSNHVNLI.IRPI..
//