GenomeNet

Database: Pfam
Entry: DNAPolymera_Pol
LinkDB: DNAPolymera_Pol
Original site: DNAPolymera_Pol 
#=GF ID   DNAPolymera_Pol
#=GF AC   PF11590.4
#=GF DE   DNA polymerase catalytic subunit Pol
#=GF AU   Pollington J
#=GF SE   pdb_1dml
#=GF GA   20.00 20.00;
#=GF TC   20.90 20.20;
#=GF NC   19.90 19.50;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 80369284 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Family
#=GF RN   [1]
#=GF RM   10882068
#=GF RT   The crystal structure of an unusual processivity factor, herpes
#=GF RT   simplex virus UL42, bound to the C terminus of its cognate
#=GF RT   polymerase. 
#=GF RA   Zuccola HJ, Filman DJ, Coen DM, Hogle JM; 
#=GF RL   Mol Cell 2000;5:267-278.
#=GF DR   INTERPRO; IPR021639;
#=GF CC   This family of proteins represents the catalytic subunit, Pol,
#=GF CC   of the Herpes simplex virus DNA polymerase. Pol binds UL42,
#=GF CC   making up the DNA polymerase. UL42 is a processivity subunit
#=GF CC   which binds to the C-terminal of Pol in a similar way that the
#=GF CC   cell cycle regulator p21 binds to PCNA [1].
#=GF SQ   197
#=GS I2B195_9ALPH/63-103     AC I2B195.1
#=GS E1B1V8_HHV2/1209-1244   AC E1B1V8.1
#=GS I1YAE2_HHV1/1200-1235   AC I1YAE2.1
#=GS K6M667_ACIBA/9-46       AC K6M667.1
#=GS E1B1W8_HHV2/1205-1240   AC E1B1W8.1
#=GS I1YAE8_HHV1/1200-1235   AC I1YAE8.1
#=GS E1B208_HHV2/1205-1240   AC E1B208.1
#=GS M9QCQ1_HHV2/1204-1239   AC M9QCQ1.1
#=GS I1YA96_HHV1/1200-1235   AC I1YA96.1
#=GS N8YX57_ACIBA/9-46       AC N8YX57.1
#=GS Q91CQ7_HHV1/1200-1235   AC Q91CQ7.2
#=GS I1YA95_HHV1/1200-1235   AC I1YA95.1
#=GS J9R067_9ALPH/1155-1190  AC J9R067.1
#=GS Q4ACM6_HHV1/1200-1235   AC Q4ACM6.1
#=GS L0N6J6_HHV1/1200-1235   AC L0N6J6.1
#=GS G8H986_HHV1/1200-1235   AC G8H986.1
#=GS I1YA68_HHV1/1200-1235   AC I1YA68.1
#=GS I1YAC2_HHV1/1200-1235   AC I1YAC2.1
#=GS E2IUD9_SHV1/1206-1241   AC E2IUD9.1
#=GS M9QCT6_HHV2/1204-1239   AC M9QCT6.1
#=GS I1YAE1_HHV1/1200-1235   AC I1YAE1.1
#=GS I1YA66_HHV1/1200-1235   AC I1YA66.1
#=GS DPOL_HHV1K/1200-1235    AC P04292.1
#=GS I1YAA8_HHV1/1200-1235   AC I1YAA8.1
#=GS D3YP94_HHV1/1200-1235   AC D3YP94.1
#=GS Q91H17_HHV2/1205-1240   AC Q91H17.1
#=GS I1YAD1_HHV1/1200-1235   AC I1YAD1.1
#=GS Q782R4_9ALPH/1144-1184  AC Q782R4.1
#=GS I1YAC1_HHV1/1200-1235   AC I1YAC1.1
#=GS DPOL_HHV2H/1205-1240    AC P89453.1
#=GS I1YA72_HHV1/1200-1235   AC I1YA72.1
#=GS G8HBE4_HHV1/1200-1235   AC G8HBE4.1
#=GS I1YAC3_HHV1/1200-1235   AC I1YAC3.1
#=GS I1YA67_HHV1/1200-1235   AC I1YA67.1
#=GS Q6R5V7_9ALPH/1174-1214  AC Q6R5V7.1
#=GS I1YAB1_HHV1/1200-1235   AC I1YAB1.1
#=GS E1B1V6_HHV2/1205-1240   AC E1B1V6.1
#=GS I1YAD2_HHV1/1200-1235   AC I1YAD2.1
#=GS E1B1Z2_HHV1/1200-1235   AC E1B1Z2.1
#=GS E1B1X5_HHV2/1199-1234   AC E1B1X5.1
#=GS I1YAB2_HHV1/1200-1235   AC I1YAB2.1
#=GS I1YAC5_HHV1/1200-1235   AC I1YAC5.1
#=GS E1B1U1_HHV1/1200-1235   AC E1B1U1.1
#=GS I1YA65_HHV1/1200-1235   AC I1YA65.1
#=GS E1B1Z4_HHV1/1200-1235   AC E1B1Z4.1
#=GS X2FIU1_CHV16/1207-1242  AC X2FIU1.1
#=GS E1B1W4_HHV2/1205-1240   AC E1B1W4.1
#=GS DPOL_GAHVM/1174-1214    AC Q9E6N9.1
#=GS E1B1U9_HHV1/1200-1235   AC E1B1U9.1
#=GS I1YA75_HHV1/1200-1235   AC I1YA75.1
#=GS E1B1Y9_HHV1/1200-1235   AC E1B1Y9.1
#=GS I1YA91_HHV1/1200-1235   AC I1YA91.1
#=GS E1B210_HHV2/1205-1240   AC E1B210.1
#=GS E1B1W2_HHV2/1205-1240   AC E1B1W2.1
#=GS I1YA69_HHV1/1200-1235   AC I1YA69.1
#=GS F8RCF8_HHV1/1200-1235   AC F8RCF8.1
#=GS E1B1X2_HHV2/1209-1244   AC E1B1X2.1
#=GS D3YPI8_HHV1/1200-1235   AC D3YPI8.1
#=GS K9MFY2_9ALPH/1205-1240  AC K9MFY2.1
#=GS G9CUD9_9ALPH/1174-1214  AC G9CUD9.1
#=GS I1YAE4_HHV1/1200-1235   AC I1YAE4.1
#=GS X2FCQ4_CHV16/1205-1240  AC X2FCQ4.1
#=GS F8RCP7_HHV1/1200-1235   AC F8RCP7.1
#=GS E1B201_HHV2/1205-1240   AC E1B201.1
#=GS E1B1U3_HHV1/1200-1235   AC E1B1U3.1
#=GS I7HDG5_HHV1/1200-1235   AC I7HDG5.1
#=GS Q9DPQ7_MEHV1/1159-1199  AC Q9DPQ7.1
#=GS E1B1V2_HHV1/1200-1235   AC E1B1V2.1
#=GS E1B1W1_HHV2/1205-1240   AC E1B1W1.1
#=GS I1YAG2_HHV2/1205-1240   AC I1YAG2.1
#=GS I1YA97_HHV1/1200-1235   AC I1YA97.1
#=GS I7HBA0_HHV1/1200-1235   AC I7HBA0.1
#=GS Q4ACM2_HHV1/1200-1235   AC Q4ACM2.1
#=GS I1YA92_HHV1/1200-1235   AC I1YA92.1
#=GS I1YA78_HHV1/1200-1235   AC I1YA78.1
#=GS I1YAC0_HHV1/1200-1235   AC I1YAC0.1
#=GS I7GY93_HHV1/1200-1235   AC I7GY93.1
#=GS A7Y7F8_9ALPH/99-139     AC A7Y7F8.1
#=GS E1B205_HHV2/1203-1238   AC E1B205.1
#=GS M9QCS4_HHV2/1204-1239   AC M9QCS4.1
#=GS B2ZUN5_HHV1/1200-1235   AC B2ZUN5.1
#=GS E1B1T9_HHV1/1200-1235   AC E1B1T9.1
#=GS E1B1X7_HHV2/1202-1237   AC E1B1X7.1
#=GS E1B1U8_HHV1/1200-1235   AC E1B1U8.1
#=GS A2TIW3_9ALPH/1160-1200  AC A2TIW3.1
#=GS Q9IBU5_9ALPH/1172-1212  AC Q9IBU5.1
#=GS E1B209_HHV2/1205-1240   AC E1B209.1
#=GS I1YA86_HHV1/1200-1235   AC I1YA86.1
#=GS Q4ACM4_HHV1/1200-1235   AC Q4ACM4.1
#=GS Q91CQ6_HHV1/1200-1235   AC Q91CQ6.2
#=GS DPOL_HHV1A/1200-1235    AC P07917.1
#=GS DPOL_HHV1A/1200-1235    DR PDB; 1DML H; 1200-1235;
#=GS DPOL_HHV1A/1200-1235    DR PDB; 1DML D; 1200-1235;
#=GS DPOL_HHV1A/1200-1235    DR PDB; 1DML B; 1200-1235;
#=GS DPOL_HHV1A/1200-1235    DR PDB; 1DML F; 1200-1235;
#=GS E1B1Z0_HHV1/1200-1235   AC E1B1Z0.1
#=GS U5TQD5_HHV1/1200-1235   AC U5TQD5.1
#=GS I3TC89_HHV1/1200-1235   AC I3TC89.1
#=GS I1YAC9_HHV1/1200-1235   AC I1YAC9.1
#=GS E1B1U4_HHV1/1200-1235   AC E1B1U4.1
#=GS E1B1Z1_HHV1/1200-1235   AC E1B1Z1.1
#=GS X2FL49_CHV16/1206-1241  AC X2FL49.1
#=GS I1YAF9_HHV2/1205-1240   AC I1YAF9.1
#=GS I1YAB4_HHV1/1200-1235   AC I1YAB4.1
#=GS I1YA73_HHV1/1200-1235   AC I1YA73.1
#=GS E1B1T8_HHV1/1200-1235   AC E1B1T8.1
#=GS I1YA88_HHV1/1200-1235   AC I1YA88.1
#=GS I1YA77_HHV1/1200-1235   AC I1YA77.1
#=GS F8RDC8_HHV1/1200-1235   AC F8RDC8.1
#=GS X2FGR7_CHV16/1205-1240  AC X2FGR7.1
#=GS G8H916_HHV1/1200-1235   AC G8H916.1
#=GS I1YAG3_HHV2/1205-1240   AC I1YAG3.1
#=GS I6TLU5_HHV21/1205-1240  AC I6TLU5.1
#=GS Q5Y0S2_9ALPH/1191-1226  AC Q5Y0S2.1
#=GS F8TC24_9ALPH/1165-1205  AC F8TC24.1
#=GS E1B1X6_HHV2/1205-1240   AC E1B1X6.1
#=GS G8H8F2_HHV1/1200-1235   AC G8H8F2.1
#=GS I1YAE5_HHV1/1200-1235   AC I1YAE5.1
#=GS X2FHV6_CHV16/1205-1240  AC X2FHV6.1
#=GS E1B204_HHV2/1205-1240   AC E1B204.1
#=GS I1YA83_HHV1/1200-1235   AC I1YA83.1
#=GS E1B1V9_HHV2/1201-1236   AC E1B1V9.1
#=GS I7GY94_HHV1/1200-1235   AC I7GY94.1
#=GS A0A010KZT8_ACIBA/9-46   AC A0A010KZT8.1
#=GS Q9WSY3_9ALPH/1144-1184  AC Q9WSY3.1
#=GS Q91CM2_HHV1/1200-1235   AC Q91CM2.1
#=GS E1B1Y8_HHV1/1200-1235   AC E1B1Y8.1
#=GS I1YAE0_HHV1/1200-1235   AC I1YAE0.1
#=GS DPOL_HHV21/1205-1240    AC P07918.1
#=GS Q19BB9_9ALPH/1174-1214  AC Q19BB9.1
#=GS E1B212_HHV2/1205-1240   AC E1B212.1
#=GS I1YAB0_HHV1/1200-1235   AC I1YAB0.1
#=GS A0A010JC16_ACIBA/9-46   AC A0A010JC16.1
#=GS I1YAF5_HHV2/1205-1240   AC I1YAF5.1
#=GS F8RDK4_HHV1/1200-1235   AC F8RDK4.1
#=GS E1B1V1_HHV1/1200-1235   AC E1B1V1.1
#=GS W0NVU4_HHV2/1205-1240   AC W0NVU4.1
#=GS I1YAD6_HHV1/1200-1235   AC I1YAD6.1
#=GS E1B1U0_HHV1/1200-1235   AC E1B1U0.1
#=GS F8RD51_HHV1/1200-1235   AC F8RD51.1
#=GS E1B206_HHV2/1201-1236   AC E1B206.1
#=GS I1YA87_HHV1/1200-1235   AC I1YA87.1
#=GS E1B1X4_HHV2/1205-1240   AC E1B1X4.1
#=GS E1B214_HHV1/1200-1235   AC E1B214.1
#=GS Q9QEL0_9ALPH/1176-1211  AC Q9QEL0.1
#=GS I1YAE7_HHV1/1200-1235   AC I1YAE7.1
#=GS E1B211_HHV2/1205-1240   AC E1B211.1
#=GS A8DNQ9_9ALPH/1044-1084  AC A8DNQ9.1
#=GS I1YA84_HHV1/1200-1235   AC I1YA84.1
#=GS E1B1X1_HHV2/1205-1240   AC E1B1X1.1
#=GS G8H882_HHV1/1200-1235   AC G8H882.1
#=GS Q9E1G2_MEHV1/1159-1199  AC Q9E1G2.1
#=GS G8H8M1_HHV1/1200-1235   AC G8H8M1.1
#=GS H9E937_HHV1/1200-1235   AC H9E937.1
#=GS I1YAA3_HHV1/1200-1235   AC I1YAA3.1
#=GS Q91H18_HHV2/1205-1240   AC Q91H18.1
#=GS I1YAA1_HHV1/1200-1235   AC I1YAA1.1
#=GS Q697J3_9ALPH/1175-1213  AC Q697J3.1
#=GS N9JI60_ACIBA/9-46       AC N9JI60.1
#=GS F8RF38_HHV1/1200-1235   AC F8RF38.1
#=GS DPOL_HHV11/1200-1235    AC P04293.2
#=GS N9J377_ACIBA/9-46       AC N9J377.1
#=GS E1B1Y5_HHV1/1200-1235   AC E1B1Y5.1
#=GS Q5GFN4_CHV1/1169-1204   AC Q5GFN4.1
#=GS F8REW4_HHV1/1200-1235   AC F8REW4.1
#=GS E1B1V0_HHV1/1200-1235   AC E1B1V0.1
#=GS Q4ACM5_HHV1/1200-1235   AC Q4ACM5.1
#=GS M9QCR2_HHV2/1205-1240   AC M9QCR2.1
#=GS E1B1U2_HHV1/1200-1235   AC E1B1U2.1
#=GS Q2QBE6_CHV16/1207-1242  AC Q2QBE6.1
#=GS E1B1W9_HHV2/1203-1238   AC E1B1W9.1
#=GS I1YA98_HHV1/1200-1235   AC I1YA98.1
#=GS E1B1X9_HHV2/1205-1240   AC E1B1X9.1
#=GS Q4ACM7_HHV1/1200-1235   AC Q4ACM7.1
#=GS DPOL_HHV1S/1200-1235    AC P09854.1
#=GS I1YAD8_HHV1/1200-1235   AC I1YAD8.1
#=GS E1B202_HHV2/1205-1240   AC E1B202.1
#=GS Q805Z8_CHV1/1212-1247   AC Q805Z8.1
#=GS E1B1V7_HHV2/1201-1236   AC E1B1V7.1
#=GS G8H8U3_HHV1/1200-1235   AC G8H8U3.1
#=GS J7GV03_HHV1/1200-1235   AC J7GV03.1
#=GS E1B1X0_HHV2/1205-1240   AC E1B1X0.1
#=GS I1YAA6_HHV1/1200-1235   AC I1YAA6.1
#=GS I1YAE3_HHV1/1200-1235   AC I1YAE3.1
#=GS I7H410_HHV1/1200-1235   AC I7H410.1
#=GS E1B1V5_HHV2/1205-1240   AC E1B1V5.1
#=GS Q9QMA5_9ALPH/108-148    AC Q9QMA5.1
#=GS A0A009HSR1_ACIBA/9-46   AC A0A009HSR1.1
#=GS I1YAD0_HHV1/1200-1235   AC I1YAD0.1
#=GS I7H409_HHV1/1200-1235   AC I7H409.1
#=GS I1YAA9_HHV1/1200-1235   AC I1YAA9.1
#=GS E1B1U5_HHV1/1200-1235   AC E1B1U5.1
#=GS F8RE08_HHV1/1200-1235   AC F8RE08.1
#=GS I1YA99_HHV1/1200-1235   AC I1YA99.1
#=GS E1B1W3_HHV2/1205-1240   AC E1B1W3.1
#=GS I1YAF7_HHV2/1205-1240   AC I1YAF7.1
#=GS I1YA81_HHV1/1200-1235   AC I1YA81.1
#=GS G8H5G6_HHV1/1200-1235   AC G8H5G6.1
#=GS E1B1Y7_HHV1/1200-1235   AC E1B1Y7.1
#=GS I1YAF3_HHV2/1205-1240   AC I1YAF3.1
#=GS I1YAB8_HHV1/1200-1235   AC I1YAB8.1
I2B195_9ALPH/63-103                ........DETAALLSSAGFAEVRLYPG.....MPLSEEKENRQKLRRAFDILA.
E1B1V8_HHV2/1209-1244              ........DDVAARLRAAGFGPAGAGA-.....----TAEETRRMLHRAFDTLA.
I1YAE2_HHV1/1200-1235              ........DDVAARLRAAGFGAVGAGA-.....----TAEETRRMLHRAFDTIA.
K6M667_ACIBA/9-46                  vnpaivel--------------VRMGEGfggtkITGSTPEETRRNLRRAFQ---a
E1B1W8_HHV2/1205-1240              ........DDVAARLRAAGFGPAGAGA-.....----TAEETRRMLHRAFDTLA.
I1YAE8_HHV1/1200-1235              ........DDVAARLRTAGFGAVGAGA-.....----TAEETRRMLHRAFDTLA.
E1B208_HHV2/1205-1240              ........DDVAARLRAAGFGPAGAGA-.....----TAEETRRMLHRAFDTLA.
M9QCQ1_HHV2/1204-1239              ........DDVAARLRAAGFGPAGAGA-.....----TAEETRRMLHRAFDTLA.
I1YA96_HHV1/1200-1235              ........DDVAARLRAAGFGAVGAGA-.....----TAEETRRMLHRAFDTLA.
N8YX57_ACIBA/9-46                  vnpaivel--------------VRMGEGfggtkITGSTPEETRRNLRRAFQ---a
Q91CQ7_HHV1/1200-1235              ........DDVAARLRAAGFGAVGAGA-.....----TAEETRRMLHRAFDTLA.
I1YA95_HHV1/1200-1235              ........DDVAARLRAAGFGAVGAGA-.....----TAEETRRMLHRAFDTLA.
J9R067_9ALPH/1155-1190             ......sg--TVARLRRAGFAVAGAGA-.....----TEAETRQRLRTAFYTLA.
Q4ACM6_HHV1/1200-1235              ........DDVAARLRAAGFGAVGAGA-.....----TAEETRRMLHRAFDTLA.
L0N6J6_HHV1/1200-1235              ........DDVTARLRATGFGAVGAGA-.....----TAEETRRMLHRAFDTLA.
G8H986_HHV1/1200-1235              ........DDVAARLRAAGFGAVGAGA-.....----TAEETRRMLHRAFDTLA.
I1YA68_HHV1/1200-1235              ........DDVAARLRTAGFGAVGAGA-.....----TAEETRRMLHRAFDTLA.
I1YAC2_HHV1/1200-1235              ........DDVAARLRAAGFGAVGAGA-.....----TAEETRRMLHRAFDTLA.
E2IUD9_SHV1/1206-1241              .......a-ELAARMRAAGFAQIGAGS-.....----TGVDTHRRLRTAFDILA.
M9QCT6_HHV2/1204-1239              ........DDVAARLRAAGFGPAGAGA-.....----TAEETRRMLHRAFDTLA.
I1YAE1_HHV1/1200-1235              ........DDVAARLRAAGFGAVGAGA-.....----TAEETRRMLHRAFDTLA.
I1YA66_HHV1/1200-1235              ........DDVTARLRTAGFGAVGAGA-.....----TAEETRRMLHRAFDTLA.
DPOL_HHV1K/1200-1235               ........DDVAARLRAAGFGAVGAGA-.....----TAEETRRMLHRAFDTLA.
I1YAA8_HHV1/1200-1235              ........DDVAARLRAAGFGAVGAGA-.....----TAEETRRMLHRAFDTLA.
D3YP94_HHV1/1200-1235              ........DDVAARLRAAGFGAVGAGA-.....----TAEETRRMLHRAFDTLA.
Q91H17_HHV2/1205-1240              ........DDVAARLRAAGFGPAGAGA-.....----TAEETRRMLHRAFDTLA.
I1YAD1_HHV1/1200-1235              ........DDVAARLRTAGFGAVGAGA-.....----TAEETRRMLHRAFDTLA.
Q782R4_9ALPH/1144-1184             .......r-AYATRVARAVFAEIRSGAG.....LSSSEEEETLQRLNRAFRILT.
I1YAC1_HHV1/1200-1235              ........DDVAARLRAAGFGAVGAGA-.....----TAEETRRMLHRAFDTLA.
DPOL_HHV2H/1205-1240               ........DDVAARLRAAGFGPAGAGA-.....----TAEETRRMLHRAFDTLA.
I1YA72_HHV1/1200-1235              ........DDVAARLRAAGFGAVGAGA-.....----TAEETRRMLHRAFDTLA.
G8HBE4_HHV1/1200-1235              ........DDVAARLRTAGFGAVGAGA-.....----TAEETRRMLHRAFDTLA.
I1YAC3_HHV1/1200-1235              ........DDVAARLRAAGFGAVGAGA-.....----TAEETRRMLHRAFDTLA.
I1YA67_HHV1/1200-1235              ........DDVAARLRAAGFGAVGAGA-.....----TAEETRRMLHRAFDTLA.
Q6R5V7_9ALPH/1174-1214             ........CSYTERVSSEMFTTIRSGIG.....LQVNEEEETRRKLNIAFRILT.
I1YAB1_HHV1/1200-1235              ........DDVTARLRAAGFGAVGAGA-.....----TAEETRRMLHRAFDTLA.
E1B1V6_HHV2/1205-1240              ........DDVAARLRAAGFGPAGAGA-.....----TAEETRRMLHRAFDTLA.
I1YAD2_HHV1/1200-1235              ........DDVAARLRAAGFGAVGAGA-.....----TAEETRRMLHRAFDTLA.
E1B1Z2_HHV1/1200-1235              ........DDVAARLRAAGFGAVGAGA-.....----TAEETRRMLHRAFDTLA.
E1B1X5_HHV2/1199-1234              ........DDVAARLRAAGFGPAGAGA-.....----TAEETRRMLHRAFDTLA.
I1YAB2_HHV1/1200-1235              ........DDVAARLRTAGFGAVGAGA-.....----TAEETRRMLHRAFDTLA.
I1YAC5_HHV1/1200-1235              ........DDVAARLRAAGFGAVGAGA-.....----TAEETRRMLHRAFDTLA.
E1B1U1_HHV1/1200-1235              ........DDVAARLRAAGFGAVGAGA-.....----TAEETRRMLHRAFDTLA.
I1YA65_HHV1/1200-1235              ........DDVAARLRAAGFGAVGAGA-.....----TAEETRRMLHRAFDTLA.
E1B1Z4_HHV1/1200-1235              ........DDVAARLRTAGFGAVGAGA-.....----TAEETRRMLHRAFDTLA.
X2FIU1_CHV16/1207-1242             ........EETAARLRAAGFRAAGAGA-.....----TEAETRRRLRTAFDTLA.
E1B1W4_HHV2/1205-1240              ........DDVAARLRAAGFGPAGAGA-.....----TAEETRRMLHRAFDTLA.
DPOL_GAHVM/1174-1214               ........CSYTERVSSEMFTTIRSGIG.....LQVNEEEETRRKLNIAFRILT.
E1B1U9_HHV1/1200-1235              ........DDVAARLRAAGFGAVGAGA-.....----TAEETRRMLHRAFDTLA.
I1YA75_HHV1/1200-1235              ........DDVAARLRAAGFGAVGAGA-.....----TAEETRRMLHRAFDTLA.
E1B1Y9_HHV1/1200-1235              ........DDVAARLRAAGFGAVGAGA-.....----TAEETRRMLHRAFDTLA.
I1YA91_HHV1/1200-1235              ........DDVAARLRPAGFGAVGAGA-.....----TAEETRRMLHRAFDTLA.
E1B210_HHV2/1205-1240              ........DDVAARLRAAGFGPAGAGA-.....----TAEETRRMLHRAFDTLA.
E1B1W2_HHV2/1205-1240              ........DDVAARLRAAGFGPAGAGA-.....----TAEETRRMLHRAFDTLA.
I1YA69_HHV1/1200-1235              ........DDVAARLRAAGFGAVGAGA-.....----TAEETRRMLHRAFDTLA.
F8RCF8_HHV1/1200-1235              ........DDVATRLRAAGFGAVGAGA-.....----TAEETRRMLHRAFDTLA.
E1B1X2_HHV2/1209-1244              ........DDVAARLRAAGFGPAGAGA-.....----TAEETRRMLHRAFDTLA.
D3YPI8_HHV1/1200-1235              ........DDVAARLRAAGFGAVGAGA-.....----TAEETRRMLHRAFDTLA.
K9MFY2_9ALPH/1205-1240             ........DDVAARLRAAGFGSAGAGA-.....----TAEETRRMLHRAFDTLA.
G9CUD9_9ALPH/1174-1214             ........CSYTERVSSEMFTTIRSGIG.....LQVNEEEETRRKLNIAFRILT.
I1YAE4_HHV1/1200-1235              ........DDVAARLRTAGFGAVGAGA-.....----TAEETRRMLHRAFDTIA.
X2FCQ4_CHV16/1205-1240             ........EETAVRLRAAGFRAAGAGA-.....----TEAETRRRLRTAFDILA.
F8RCP7_HHV1/1200-1235              ........DDVAARLRAAGFGAVGAGA-.....----TAEETRRMLHRAFDTLA.
E1B201_HHV2/1205-1240              ........DDVAARLRAAGFGPAGAGA-.....----TAEETRRMLHRAFDTLA.
E1B1U3_HHV1/1200-1235              ........DDVAARLRTAGFGAVGAGA-.....----TAEETRRMLHRAFDTLA.
I7HDG5_HHV1/1200-1235              ........DDVAARLRAAGFGAVGAGA-.....----TAEETRRMLHRAFDTLA.
Q9DPQ7_MEHV1/1159-1199             ........MDCAERLPSAIFTTIKSGAG.....VPVNEEEENHRKLRKAFRILT.
E1B1V2_HHV1/1200-1235              ........DDVAARLRTAGFGAVGAGA-.....----TAEETRRMLHRAFDTLA.
E1B1W1_HHV2/1205-1240              ........DDVAARLRAAGFGPAGAGA-.....----TAEETRRMLHRAFDTLA.
I1YAG2_HHV2/1205-1240              ........DDVAARLRAAGFGPAGAGA-.....----TAEETRRMLHRAFDTLA.
I1YA97_HHV1/1200-1235              ........DDVAARLRAAGFGAVGAGA-.....----TAEETRRMLHRAFDTLA.
I7HBA0_HHV1/1200-1235              ........DDVAARLRAAGFGAVGAGA-.....----TAEETRRMLHRAFDTLA.
Q4ACM2_HHV1/1200-1235              ........DDVAARLRAAGFGAVGAGA-.....----TAEETRRMLHRAFDTLA.
I1YA92_HHV1/1200-1235              ........DDVTARLRAAGFGAVGAGA-.....----TAEETRRMLHRAFDTLA.
I1YA78_HHV1/1200-1235              ........DDVAARLRAAGFGAVGAGA-.....----TAEETRRMLHRAFDTLA.
I1YAC0_HHV1/1200-1235              ........DDVAARLRAAGFGAVGAGA-.....----TAEETRRMLHRAFDTLA.
I7GY93_HHV1/1200-1235              ........DDVAARLRAAGFGAVGAGA-.....----TAEETRRMLHRAFDTLA.
A7Y7F8_9ALPH/99-139                ........DETAALLSSAGFAEVRLYPG.....MPLSEEEENRQKLRRAFDILA.
E1B205_HHV2/1203-1238              ........DDVAARLRAAGFGPAGAGA-.....----TAEETRRMLHRAFDTLA.
M9QCS4_HHV2/1204-1239              ........DDVAARLRAAGFGPAGAGA-.....----TAEETRRMLHRAFDTLA.
B2ZUN5_HHV1/1200-1235              ........DDVAARLRAAGFGAVGAGA-.....----TAEETRRMLHRAFDTLA.
E1B1T9_HHV1/1200-1235              ........DDVAARLRAAGFGAVGAGA-.....----TAEETRRMLHRAFDTLA.
E1B1X7_HHV2/1202-1237              ........DDVAARLRAAGFGPAGAGA-.....----TAEETRRMLHRAFDTLA.
E1B1U8_HHV1/1200-1235              ........DDVAARLRAAGFGAVGAGA-.....----TAEETRRMLHRAFDTLA.
A2TIW3_9ALPH/1160-1200             ........DETAALLSSAGFAEVRLYPG.....MPLSEEEENRQKLRRAFDILA.
Q9IBU5_9ALPH/1172-1212             .......d-VVTRNVSSEMFTTIRNGIG.....LQVNEEEETRRKLNIAFRILT.
E1B209_HHV2/1205-1240              ........DDVAARLRAAGFGPAGAGA-.....----TAEETRRMLHRAFDTLA.
I1YA86_HHV1/1200-1235              ........DDVAARLRAAGFGAVGAGA-.....----TAEETRRMLHRAFDTLA.
Q4ACM4_HHV1/1200-1235              ........DDVAARLRAAGFGAVGAGA-.....----TAEETRRMLHRAFDTLA.
Q91CQ6_HHV1/1200-1235              ........DDVAARLRAAGFGAVGAGA-.....----TAEETRRMLHRAFDTLA.
DPOL_HHV1A/1200-1235               ........DDVAARLRAAGFGAVGAGA-.....----TAEETRRMLHRAFDTLA.
#=GR DPOL_HHV1A/1200-1235    SS    ........-HHHHHHHHTT-EEECTTS-.....-----HHHHHHHHHHHHHHH-.
E1B1Z0_HHV1/1200-1235              ........DDVAARLRAAGFGAVGAGA-.....----TAEETRRMLHIAFDTLA.
U5TQD5_HHV1/1200-1235              ........DDVAARLRTAGFGAVGAGA-.....----TAEETRRMLHRAFDTLA.
I3TC89_HHV1/1200-1235              ........DDVAARLRAAGFGAVGAGA-.....----TAEETRRMLHRAFDTLA.
I1YAC9_HHV1/1200-1235              ........DDVAARLRTAGFGAVGAGA-.....----TAEETRRMLHRAFDTLA.
E1B1U4_HHV1/1200-1235              ........DDVAARLRAAGFGAVGAGA-.....----TAEETRRMLHRAFDTLA.
E1B1Z1_HHV1/1200-1235              ........DDVAARLRAAGFGAVGAGA-.....----TAEETRRMLHRAFDTLA.
X2FL49_CHV16/1206-1241             ........EETAVRLRAAGFRAAGAGA-.....----TEAETRRRLRTAFDTLA.
I1YAF9_HHV2/1205-1240              ........DDVAARLRAAGFGPAGAGA-.....----TAEETRRMLHRAFDTLA.
I1YAB4_HHV1/1200-1235              ........DDVAARLRAAGFGAVGAGA-.....----TAEETRRMLHRAFDTLA.
I1YA73_HHV1/1200-1235              ........DDVAARLRTAGFGAVGAGA-.....----TAEETRRMLHRAFDTLA.
E1B1T8_HHV1/1200-1235              ........DDVAARLRTAGFGAVGAGA-.....----TAEETRRMLHRAFDTLA.
I1YA88_HHV1/1200-1235              ........DDVAARLRAAGFGAVGAGA-.....----TAEETRRMLHRAFDTLA.
I1YA77_HHV1/1200-1235              ........DDVAARLRAAGFGAVGAGA-.....----TAEETRRMLHRAFDTLA.
F8RDC8_HHV1/1200-1235              ........DDVAARLRAAGFGAVGAGA-.....----TAEETRRMLHRAFDTLA.
X2FGR7_CHV16/1205-1240             ........EETAVRLRAAGFRAAGAGA-.....----TEAETRRRLRTAFDTLA.
G8H916_HHV1/1200-1235              ........DDVTARLRAAGFGAVGAGA-.....----TAEETRRMLHRAFDTLA.
I1YAG3_HHV2/1205-1240              ........DDVAARLRAAGFGPAGAGA-.....----TAEETRRMLHRAFDTLA.
I6TLU5_HHV21/1205-1240             ........DDVAARLRAAGFGPAGAGA-.....----TAEETRRMLHRAFDTLA.
Q5Y0S2_9ALPH/1191-1226             ........EETAVRLRSAGFRAAGAGV-.....----TEAETRQRLRTAFDTLA.
F8TC24_9ALPH/1165-1205             .......r-AYATRVARAVFAEIRSGAG.....LSSSEEEETLQRLNRAFRILT.
E1B1X6_HHV2/1205-1240              ........DDVAARLRAAGFGPAGAGA-.....----TAEETRRMLHRAFDTLA.
G8H8F2_HHV1/1200-1235              ........DDVAARLRTAGFGAVGAGA-.....----TAEETRRMLHRAFDTLA.
I1YAE5_HHV1/1200-1235              ........DDVAARLRAAGFGAVGAGA-.....----TAEETRRMLHRAFDTLA.
X2FHV6_CHV16/1205-1240             ........EETAVRLRAAGFRAAGAGA-.....----TEAETRRRLRTAFDTLA.
E1B204_HHV2/1205-1240              ........DDVAARLRAAGFGPAGAGA-.....----TAEETRRMLHRAFDTLA.
I1YA83_HHV1/1200-1235              ........DDVAARLRTAGFGAVGAGA-.....----TAEETRRMLHRAFDTLA.
E1B1V9_HHV2/1201-1236              ........DDVAARLRAAGFGPAGAGA-.....----TAEETRRMLHRAFDTLA.
I7GY94_HHV1/1200-1235              ........DDVAARLRAAGFGAVGAGA-.....----TAEETRRMLHRAFDTLA.
A0A010KZT8_ACIBA/9-46              vnpaivel--------------VRMGEGfggtkITGSTPEETRRNLRRAFQ---a
Q9WSY3_9ALPH/1144-1184             .......r-AYATRVARAVFAEIRSGAG.....LSSSEEEETLQRLNRAFRILT.
Q91CM2_HHV1/1200-1235              ........DDVTARLRAAGFGAVGAGA-.....----TAEETRRMLHRAFDTLA.
E1B1Y8_HHV1/1200-1235              ........DDVAARLRTAGFGAVGAGA-.....----TAEETRRMLHRAFDTLA.
I1YAE0_HHV1/1200-1235              ........DDVAARLRAAGFGAVGAGA-.....----TAEETRRMLHRAFDTLA.
DPOL_HHV21/1205-1240               ........DDVAARLRAAGFGPAGAGA-.....----TAEETRRMLHRAFDTLA.
Q19BB9_9ALPH/1174-1214             ........CSYTERVSSEMFTTIRSGIG.....LQVNEEEETRRKLNIAFRILT.
E1B212_HHV2/1205-1240              ........DDVAARLRAAGFGPAGAGA-.....----TAEETRRMLHRAFDTLA.
I1YAB0_HHV1/1200-1235              ........DDVAARLRAAGFGAVGAGA-.....----TAEETRRMLHRAFDTLA.
A0A010JC16_ACIBA/9-46              vnpaivel--------------VRMGEGfggtkITGSTPEETRRNLRRAFQ---a
I1YAF5_HHV2/1205-1240              ........DDVAARLRAAGFGPAGAGA-.....----TAEETRRMLHRAFDTLA.
F8RDK4_HHV1/1200-1235              ........DDVAARLRAAGFGAVGAGA-.....----TAEETRRMLHRAFDTLA.
E1B1V1_HHV1/1200-1235              ........DDVAARLRAAGFGAVGAGA-.....----TAEETRRMLHRAFDTLA.
W0NVU4_HHV2/1205-1240              ........DDVAARLRAAGFGPAGAGA-.....----TAEETRRMLHRAFDTLA.
I1YAD6_HHV1/1200-1235              ........DDVAARLRAAGFGAVGAGA-.....----TAEETRRMLHRAFDTLA.
E1B1U0_HHV1/1200-1235              ........DDVAARLRAAGFGAVGAGA-.....----TAEETRRMLHRAFDTLA.
F8RD51_HHV1/1200-1235              ........DDVATRLRAAGFGAVGAGA-.....----TAEETRRMLHRAFDTLA.
E1B206_HHV2/1201-1236              ........DDVAARLRAAGFGPAGAGA-.....----TAEETRRMLHRAFDTLA.
I1YA87_HHV1/1200-1235              ........DDVAARLRAAGFGAVGAGA-.....----TAEETRRMLHRAFDTLA.
E1B1X4_HHV2/1205-1240              ........DDVAARLRAAGFGPAGAGA-.....----TAEETRRMLHRAFDTLA.
E1B214_HHV1/1200-1235              ........DDVAARLRAAGFGAVGAGA-.....----TAEETRRMLHRAFDTLA.
Q9QEL0_9ALPH/1176-1211             .......p-VTAARLSRAGFAVVGAGA-.....----TEEETRQRLRTAFDTLA.
I1YAE7_HHV1/1200-1235              ........DDVTARLRAAGFGAVGAGA-.....----TAEETRRMLHRAFDTLA.
E1B211_HHV2/1205-1240              ........DDVAARLRAAGFGPAGAGA-.....----TAEETRRMLHRAFDTLA.
A8DNQ9_9ALPH/1044-1084             ........DETAALLSSAGFAEVRLYPG.....MPLSEEEENRQKLRRAFDILA.
I1YA84_HHV1/1200-1235              ........DDVAARLRTAGFGAVGAGA-.....----TAEETRRMLHRAFDTLA.
E1B1X1_HHV2/1205-1240              ........DDVAARLRAAGFGPAGAGA-.....----TAEETRRMLHRAFDTLA.
G8H882_HHV1/1200-1235              ........DDVAARLRAAGFGAVGAGA-.....----TAEETRRMLHRAFDTLA.
Q9E1G2_MEHV1/1159-1199             ........MDCAERLPSAIFTTIKSGAG.....VPVNEEEENHRKLRKAFRILT.
G8H8M1_HHV1/1200-1235              ........DDVAARLRAAGFGAVGAGA-.....----TAEETRRMLHRAFDTLA.
H9E937_HHV1/1200-1235              ........DDVAARLRAAGFGAVGAGA-.....----TAEETRRMLHRAFDTLA.
I1YAA3_HHV1/1200-1235              ........DDVAARLRAAGFGAVGAGA-.....----TAEETRRMLHRAFDTLA.
Q91H18_HHV2/1205-1240              ........DDVAARLRAAGFGPAGAGA-.....----TAEETRRMLHRAFDTLA.
I1YAA1_HHV1/1200-1235              ........DDVAARLRAAGFGAVGAGA-.....----TAEETRRMLHRAFDTLA.
Q697J3_9ALPH/1175-1213             ........EEVRERLVRAGFDVLTFPE-.....-TSVMEEENLQKLSTAFCILA.
N9JI60_ACIBA/9-46                  vnpaivel--------------VRMGEGfggtkITGSTPEETRRNLRRAFQ---a
F8RF38_HHV1/1200-1235              ........DDVAARLRAAGFGAVGAGA-.....----TAEETRRMLHRAFDTLA.
DPOL_HHV11/1200-1235               ........DDVAARLRTAGFGAVGAGA-.....----TAEETRRMLHRAFDTLA.
N9J377_ACIBA/9-46                  vnpaivel--------------VRMGEGfggtkITGSTPEETRRNLRRAFQ---a
E1B1Y5_HHV1/1200-1235              ........DDVAARLRAAGFGAVGAGA-.....----TAEETRRMLHRAFDTLA.
Q5GFN4_CHV1/1169-1204              ........EETAIRLRGAGFRAAGAGA-.....----TEEETRQRLRRAFDTLA.
F8REW4_HHV1/1200-1235              ........DDVAARLRAAGFGAVGAGA-.....----TAEETRRMLHRAFDTLA.
E1B1V0_HHV1/1200-1235              ........DDVAARLRAAGFGAVGAGA-.....----TAEETRRMLHRAFDTLA.
Q4ACM5_HHV1/1200-1235              ........DDVAARLRAAGFGAVGAGA-.....----TAEETRRMLHRAFDTLA.
M9QCR2_HHV2/1205-1240              ........DDVAARLRAAGFGPAGAGA-.....----TAEETRRMLHRAFDTLA.
E1B1U2_HHV1/1200-1235              ........DDVTARLRAAGFGAVGAGA-.....----TAEETRRMLHRAFDTLA.
Q2QBE6_CHV16/1207-1242             ........EETAVRLRAAGFRAAGAGA-.....----TEAETRRRLRTAFDTLA.
E1B1W9_HHV2/1203-1238              ........DDVAARLRAAGFGPAGAGA-.....----TAEETRRMLHRAFDTLA.
I1YA98_HHV1/1200-1235              ........DDVAARLRTAGFGAVGAGA-.....----TAEETRRMLHRAFDTLA.
E1B1X9_HHV2/1205-1240              ........DDVAARLRAAGFGPAGAGA-.....----TAEETRRMLHRAFDTLA.
Q4ACM7_HHV1/1200-1235              ........DDVAARLRAAGFGAVGAGA-.....----TAEETRRMLHRAFDTLA.
DPOL_HHV1S/1200-1235               ........DDVTARLRAAGFGAVGAGA-.....----TAEETRRMLHRAFDTLA.
I1YAD8_HHV1/1200-1235              ........DDVAARLRAAGFGAVGAGA-.....----TAEETRRMLHRAFDTLA.
E1B202_HHV2/1205-1240              ........DDVAARLRAAGFGPAGAGA-.....----TAEETRRMLHRAFDTLA.
Q805Z8_CHV1/1212-1247              ........EETAIRLRGAGFRAAGAGA-.....----TEEETRQRLRRAFDTLA.
E1B1V7_HHV2/1201-1236              ........DDVAARLRAAGFGPAGAGA-.....----TAEETRRMLHRAFDTLA.
G8H8U3_HHV1/1200-1235              ........DDVAARLRAAGFGAVGAGA-.....----TAEETRRMLHRAFDTLA.
J7GV03_HHV1/1200-1235              ........DDVAARLRAAGFGAVGAGA-.....----TAEETRRMLHRAFDTLA.
E1B1X0_HHV2/1205-1240              ........DDVAARLRAAGFGPAGAGA-.....----TAEETRRMLHRAFDTLA.
I1YAA6_HHV1/1200-1235              ........DDVAARLRAAGFGAVGAGA-.....----TAEETRRMLHRAFDTLA.
I1YAE3_HHV1/1200-1235              ........DDVTARLRAAGFGAVGAGA-.....----TAEETRRMLHRAFDTLA.
I7H410_HHV1/1200-1235              ........DDVAARLRAAGFGAVGAGA-.....----TAEETRRMLHRAFDTLA.
E1B1V5_HHV2/1205-1240              ........DDVAARLRAAGFGPAGAGA-.....----TAEETRRMLHRAFDTLA.
Q9QMA5_9ALPH/108-148               ........DETAALLSSAGFAEVRLYPG.....MPLSEEEENRQKLRRAFDILA.
A0A009HSR1_ACIBA/9-46              vnpaivel--------------VRMGEGfggtkITGSTPEETRRNLRRAFQ---a
I1YAD0_HHV1/1200-1235              ........DDVAARLRAAGFGAVGAGA-.....----TAEETRRMLHRAFDTLA.
I7H409_HHV1/1200-1235              ........DDVAARLRAAGFGAVGAGA-.....----TAEETRRMLHRAFDTLA.
I1YAA9_HHV1/1200-1235              ........DDVAARLRTAGFGAVGAGA-.....----TAEETRRMLHRAFDTLA.
E1B1U5_HHV1/1200-1235              ........DDVAARLRAAGFGAVGAGA-.....----TAEETRRMLHRAFDTLA.
F8RE08_HHV1/1200-1235              ........DDVAARLRAAGFGAVGAGA-.....----TAEETRRMLHRAFDTLA.
I1YA99_HHV1/1200-1235              ........DDVAARLRAAGFGAVGAGA-.....----TAEETRRMLHRAFDTLA.
E1B1W3_HHV2/1205-1240              ........DDVAARLRAAGFGPAGAGA-.....----TAEETRRMLHRAFDTLA.
I1YAF7_HHV2/1205-1240              ........DDVAARLRAAGFGPAGAGA-.....----TAEETRRMLHRAFDTLA.
I1YA81_HHV1/1200-1235              ........DDVATRLRAAGFGAVGAGA-.....----TAEETRRMLHRAFDTLA.
G8H5G6_HHV1/1200-1235              ........DDVAARLRTAGFGAVGAGA-.....----TAEETRRMLHRAFDTLA.
E1B1Y7_HHV1/1200-1235              ........DDVAARLRTAGFGAVGAGA-.....----TAEETRRMLHRAFDTLA.
I1YAF3_HHV2/1205-1240              ........DDVAARLRAAGFGPAGAGA-.....----TAEETRRMLHRAFDTLA.
I1YAB8_HHV1/1200-1235              ........DDVAARLRTAGFGAVGAGA-.....----TAEETRRMLHRAFDTLA.
#=GC SS_cons                       ........-HHHHHHHHTT-EEECTTS-.....-----HHHHHHHHHHHHHHH-.
#=GC seq_cons                      ........DDVAARLRAAGFGAVGAGA..........TAEETRRMLHRAFDTLA.
//
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