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Database: Pfam
Entry: DNAPolymera_Pol
LinkDB: DNAPolymera_Pol
Original site: DNAPolymera_Pol 
#=GF ID   DNAPolymera_Pol
#=GF AC   PF11590.5
#=GF DE   DNA polymerase catalytic subunit Pol
#=GF AU   Pollington J
#=GF SE   pdb_1dml
#=GF GA   20.00 20.00;
#=GF TC   73.50 72.20;
#=GF NC   19.70 18.60;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 11927849 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Family
#=GF RN   [1]
#=GF RM   10882068
#=GF RT   The crystal structure of an unusual processivity factor, herpes
#=GF RT   simplex virus UL42, bound to the C terminus of its cognate
#=GF RT   polymerase. 
#=GF RA   Zuccola HJ, Filman DJ, Coen DM, Hogle JM; 
#=GF RL   Mol Cell 2000;5:267-278.
#=GF DR   INTERPRO; IPR021639;
#=GF CC   This family of proteins represents the catalytic subunit, Pol,
#=GF CC   of the Herpes simplex virus DNA polymerase. Pol binds UL42,
#=GF CC   making up the DNA polymerase. UL42 is a processivity subunit
#=GF CC   which binds to the C-terminal of Pol in a similar way that the
#=GF CC   cell cycle regulator p21 binds to PCNA [1].
#=GF SQ   3
#=GS DPOL_HHV11/1200-1235  AC P04293.2
#=GS DPOL_GAHVM/1174-1214  AC Q9E6N9.1
#=GS DPOL_HHV2H/1205-1240  AC P89453.1
DPOL_HHV11/1200-1235             DDVAARLRTAGFGAVGAGA.....TAEETRRMLHRAFDTLA
DPOL_GAHVM/1174-1214             CSYTERVSSEMFTTIRSGIglqvnEEEETRRKLNIAFRILT
DPOL_HHV2H/1205-1240             DDVAARLRAAGFGPAGAGA.....TAEETRRMLHRAFDTLA
#=GC seq_cons                    DDVAARLRoAGFGslGAGA.....TAEETRRMLHRAFDTLA
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