GenomeNet

Database: Pfam
Entry: DNA_pol_viral_N
LinkDB: DNA_pol_viral_N
Original site: DNA_pol_viral_N 
#=GF ID   DNA_pol_viral_N
#=GF AC   PF00242.14
#=GF DE   DNA polymerase (viral) N-terminal domain
#=GF AU   Finn RD
#=GF SE   Pfam-B_107 (release 1.0)
#=GF GA   29.90 29.90;
#=GF TC   77.10 76.10;
#=GF NC   16.70 15.90;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 11927849 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Family
#=GF DR   INTERPRO; IPR000201;
#=GF SQ   2
#=GS DPOL_HBVCJ/1-352   AC Q69028.2
#=GS DPOL_DHBVQ/59-342  AC Q66403.1
DPOL_HBVCJ/1-352              .............MPLSYQHFRKLLLLDDEAGPLEEELPRLADEGLNRRVAEDLNLGNLNVSIPWTHKVGNFTGLYSSTVPVFNPDWKTPSFPHIHLQEDIINRCQQYVGPLTVNEKRRLKLIMPARFYPNLTKYLPLDKGIKPYYPEYAVNHYFKTRHYLHTLWKAGILYKRETTRSASFCGSPYSWEQE.LQHGRLVFQTSTRHGDESFCSQSSGILSRSPVGPCVRSQLKQSRLGLQPQQGSLARGKSGRSGSIWSRVHPTTRRPFGVEPSGSGHIDNTASSTSSCLHQSAVRKTAYSHLSTSKRQSSSGHAVELHNIPPSSARSQSEGPIFSCWWLQFRNSKPCSDYCLTHIVNLLEDWGPC.........................................................................................................................................
DPOL_DHBVQ/59-342             pnvraplshvvra--------------------------------------ATIDLPRLGNKLPAKHHLGKLSGLYQMKGCTFNPEWKVPDISDTHFDLQVVNECP----------SRNWKYLTPAKFWPKSISYFPVQAGVKAKYPDNVMQHEAIVGKYLNRLYEAGILYKRISKHLVTFKGKPYNWELQyLVK---------------------------------------------------------------------------------------------------------------------------------------------------------------------------qhqvpdgtttskingraenrrrrapaksisrphdserdcnmvgqisnnrssirpcanngggkhssttgrlacwggktigtdqsyssrdasasvdsrgrskssrgfssisrrkatgnhhhcsyvtnsveattrgrstp
#=GC seq_cons                 ...................................................tslsLspLssplPhpH+lGphoGLYp.psssFNP-WKsPshschHhp.pllNcC...........pRphKhlhPA+FaPp.hpYhPlptGlKshYP-.shpH.hhst+YLppLacAGILYKR.op+.soFpGpPYsWE.p.L.+....................................................................................................................................................................................................................................................................................................................
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