GenomeNet

Database: Pfam
Entry: DUF1231
LinkDB: DUF1231
Original site: DUF1231 
#=GF ID   DUF1231
#=GF AC   PF06802.8
#=GF DE   Protein of unknown function (DUF1231)
#=GF AU   Moxon SJ
#=GF SE   Pfam-B_9856 (release 10.0)
#=GF GA   25.00 25.00;
#=GF TC   795.40 795.30;
#=GF NC   20.30 17.80;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 11927849 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Family
#=GF WK   Domain_of_unknown_function
#=GF DR   INTERPRO; IPR009633;
#=GF CC   This family consists of several Orthopoxvirus specific proteins
#=GF CC   predominantly of around 340 residues in length. This family
#=GF CC   contains both B17 and B15 proteins, the function of which are
#=GF CC   unknown.
#=GF SQ   2
#=GS B17_VAR67/1-340  AC P33878.1
#=GS B17_VACCW/1-340  AC Q01221.1
B17_VAR67/1-340             MSRKFMQVYEYDREQYLDEFIEDRYNDSFIASPEYYSAEKYMCRYTILNHNCVNVRRCALDSKLLHDIITNCKIYNNIELVRATKFVYYLDLIKCNWVSKVGDSVLYPVIFITHTSTRNLDKVSVKTYKGVKVKKLNRCADHAIVINPFVKFKLTLPNKTSHAKVLVTFCKLRTDIMPIEAPYPGNVLVYTFPDIHKRIPGYIHINIEGCIDGIIYINSSKFSCVLKLHRSMYRIPPFPIDICSCCSQYTNDDIEIPIHDLIKDVVIFKNKEMVYYLKLNNKTIARFTYFNNIDTAITQEHKYVKIALGIVCKLMINNMHSIVGVNHSNTFVNCLLEDNV
B17_VACCW/1-340             MSRKFMQVYEYDREQYLDEFIEDRYNDSFITSPEYYSAEKYMCRYTTLNHNCINVRRCALDSKLLHDIITNCKIYNNIELVRATKFVYYLDLIKCNWVSKVGDSVLYPVIFITHTSTRNLDKVSVKTYKGVKVKKLNRCADHAIVINPFVKFKLTLPNKTSHAKVLVTFCKLKTDITPVEAPLPGNVLVYTFPDINKRIPGYIHLNIEGCIDGMIYINSSKFACVLKLHRSMYRIPPFPIDICSCCSQYINYDIEIPIHDLIKDVAIFKNKETVYYLKLNNKTIARFTYFNNIDTAITQEHEYVKIALGIVCKLMINNMHSIVGVNHSNTFVNCLLEDNV
#=GC seq_cons               MSRKFMQVYEYDREQYLDEFIEDRYNDSFIsSPEYYSAEKYMCRYThLNHNClNVRRCALDSKLLHDIITNCKIYNNIELVRATKFVYYLDLIKCNWVSKVGDSVLYPVIFITHTSTRNLDKVSVKTYKGVKVKKLNRCADHAIVINPFVKFKLTLPNKTSHAKVLVTFCKL+TDIhPlEAPhPGNVLVYTFPDIpKRIPGYIHlNIEGCIDGhIYINSSKFuCVLKLHRSMYRIPPFPIDICSCCSQYhN.DIEIPIHDLIKDVsIFKNKEhVYYLKLNNKTIARFTYFNNIDTAITQEHcYVKIALGIVCKLMINNMHSIVGVNHSNTFVNCLLEDNV
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