GenomeNet

Database: Pfam
Entry: DUF1560
LinkDB: DUF1560
Original site: DUF1560 
#=GF ID   DUF1560
#=GF AC   PF07597.7
#=GF DE   Protein of unknown function (DUF1560)
#=GF AU   Studholme DJ
#=GF SE   Blast clustering of Pirellula genome
#=GF GA   25.00 25.00;
#=GF TC   28.20 27.70;
#=GF NC   20.30 19.20;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 80369284 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Family
#=GF WK   Domain_of_unknown_function
#=GF DR   INTERPRO; IPR011454;
#=GF CC   Small family of short hypothetical proteins in Rhodopirellula
#=GF CC   baltica.
#=GF SQ   8
#=GS F2AWH5_RHOBT/11-39    AC F2AWH5.1
#=GS Q7USN5_RHOBA/28-55    AC Q7USN5.1
#=GS Q7UUU5_RHOBA/42-90    AC Q7UUU5.1
#=GS Q7UHW2_RHOBA/10-39    AC Q7UHW2.1
#=GS K5E602_RHOBT/27-57    AC K5E602.1
#=GS M5SH91_9PLAN/215-237  AC M5SH91.1
#=GS K5DCD1_RHOBT/12-39    AC K5DCD1.1
#=GS K5DL78_RHOBT/10-39    AC K5DL78.1
F2AWH5_RHOBT/11-39               vlkpnipgpgi-------------------------------ISVRSAEISVPLVALAEH.
Q7USN5_RHOBA/28-55               ...lkpnilcp-----------------------------RTISVRSAKISVPLAALAEH.
Q7UUU5_RHOBA/42-90               ...........CTLGFLHPTSFAKRSRWECRRFEAKHPLSKNISVRSAEISVPLAALAEH.
Q7UHW2_RHOBA/10-39               .gvlkpnilcp-----------------------------KTISVRSAEISVPLAALAEH.
K5E602_RHOBT/27-57               ........sea----FLYPTSFASRLRWEYSRFEAKHPLSKN------------------h
M5SH91_9PLAN/215-237             ......pgpgi-------------------------------ISVRSAEISVPLAALAEH.
K5DCD1_RHOBT/12-39               ......lkpti--------------------------PCPRTIRVRSAEMSVPLATLVEH.
K5DL78_RHOBT/10-39               .gvlkpnilcp-----------------------------RTIGVRSAKIGVPLAALAEH.
#=GC seq_cons                    ......sh.s..............................+sISVRSAEISVPLAALAEH.
//
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