GenomeNet

Database: Pfam
Entry: DUF1878
LinkDB: DUF1878
Original site: DUF1878 
#=GF ID   DUF1878
#=GF AC   PF08963.8
#=GF DE   Protein of unknown function (DUF1878)
#=GF AU   Mistry J, Sammut SJ
#=GF SE   pdb_1sed
#=GF GA   21.60 21.60;
#=GF TC   22.40 26.00;
#=GF NC   21.50 21.50;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 17690987 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Family
#=GF WK   Domain_of_unknown_function
#=GF DR   INTERPRO; IPR015058;
#=GF CC   This domain is found in a set of hypothetical bacterial
#=GF CC   proteins.
#=GF SQ   35
#=GS R6SZI0_9FIRM/65-180      AC R6SZI0.1
#=GS N0AR95_9BACI/3-111       AC N0AR95.1
#=GS A0A0H4P018_9BACI/1-110   AC A0A0H4P018.1
#=GS G2TP34_BACCO/1-109       AC G2TP34.1
#=GS C4L3M8_EXISA/3-112       AC C4L3M8.1
#=GS U5L990_9BACI/3-111       AC U5L990.1
#=GS A0A0H4KB02_9BACI/1-110   AC A0A0H4KB02.1
#=GS C5D6L7_GEOSW/1-110       AC C5D6L7.1
#=GS A0A0N0VN75_9BACI/1-96    AC A0A0N0VN75.1
#=GS C2W4T0_BACCE/5-113       AC C2W4T0.1
#=GS K6CGH6_9BACI/4-112       AC K6CGH6.1
#=GS A0A075LHX8_9BACI/1-110   AC A0A075LHX8.1
#=GS Q65LS9_BACLD/1-110       AC Q65LS9.1
#=GS A0A075JL36_9BACI/19-124  AC A0A075JL36.1
#=GS K6DQB8_BACAZ/1-110       AC K6DQB8.1
#=GS Q81GY2_BACCR/1-109       AC Q81GY2.1
#=GS A0A0N0Z3I1_9BACI/1-73    AC A0A0N0Z3I1.1
#=GS A0A090IZP4_9BACI/2-111   AC A0A090IZP4.1
#=GS D5DYZ6_BACMQ/1-110       AC D5DYZ6.1
#=GS A0A0K0GAY0_9FIRM/5-110   AC A0A0K0GAY0.1
#=GS Q5L292_GEOKA/1-110       AC Q5L292.1
#=GS A0A0M2SSP5_9BACI/4-111   AC A0A0M2SSP5.1
#=GS A7GLZ0_BACCN/1-109       AC A7GLZ0.1
#=GS A0A0M2PHM5_9BACI/1-109   AC A0A0M2PHM5.1
#=GS A0A024QDU4_9BACI/4-109   AC A0A024QDU4.1
#=GS W1SR64_9BACI/4-112       AC W1SR64.1
#=GS A0A059NWB8_9BACI/1-109   AC A0A059NWB8.1
#=GS A0A098F660_9BACI/3-111   AC A0A098F660.1
#=GS Q81U43_BACAN/1-109       AC Q81U43.1
#=GS A0A023CSI5_GEOSE/1-110   AC A0A023CSI5.1
#=GS A6CRL2_9BACI/1-109       AC A6CRL2.1
#=GS B7GF05_ANOFW/1-109       AC B7GF05.1
#=GS A8FBL0_BACP2/1-109       AC A8FBL0.1
#=GS YHAI_BACSU/1-110         AC O07517.1
#=GS YHAI_BACSU/1-110         DR PDB; 1SED B; 4-110;
#=GS YHAI_BACSU/1-110         DR PDB; 1SED A; 2-110;
#=GS YHAI_BACSU/1-110         DR PDB; 1SED C; 2-110;
#=GS I8AJY3_9BACI/1-110       AC I8AJY3.1
R6SZI0_9FIRM/65-180                 iskliaesntke-----------ELHNS-LAKVYKKQATDFYKLLRPRYLRLKGLQESENTCTADEdKTMTAQKTEKVVYHDVLSVKLDELLDGKcnkdelaLIREAVIDATT...KQQLYIRMVKEFKK---e......
N0AR95_9BACI/3-111                  ...........y-NALIDKIVQLEYHQKLLLKMLSDTKLQFFKLVIEKSLREADVDAFFKLCDQLS.NDLKEQKAEGFVHFNPLFDKFKVNLHPN.......LQAEDVIRSCL...AQQLFTPLMTEFKKYI-.......
A0A0H4P018_9BACI/1-110              ............MEDIIKRLEMLEYHQQLLIQMVDKNRHEFDWLIIKNRLTKEETAEFFELCEELN.KKYQEQKADGFVFHVPLFQEFEKRLHSK.......LDCKEVIAACI...KQGLYKELMIQLYK---nls....
G2TP34_BACCO/1-109                  ............MESIEQKLERLEFYQTLLLKMIGTSQYPFFRLIMEKQLSKQDIEQFYALCDRLS.DELKEQKADKFVYFYPLFQKFKESLHEK.......LQPAEVIAACL...QQGLYPDLMKALKR---nl.....
C4L3M8_EXISA/3-112                  ..........ev--SLEEKVEHLAYQMKILLEIVDWTDRPFEYEVIRANLTKQEVESFYQLLEEIR.AQQNEQLRYGYTSIEPLLVHFAGMLDVR.......LDVKTILEACV...RQGIALDVTE-------plyrqvr
U5L990_9BACI/3-111                  .........ige---LLERIEKLEYHQKLLLMMASGQTLPFYRMVVEKSLDQKEVTQFFYLCDKLS.KELEEQKAEGFVYFHPLYTEFKHKLHPS.......LKPEMVIPACL...RQNLFMDLMSELKKYL-.......
A0A0H4KB02_9BACI/1-110              ............MESLENRIERLELYLELLLKVTDLESQPFYKLVISKNLNKKELAEVYSICEELD.KKYEEQKKQGLIDFVPLLTQFVGQLPYK.......LNPHETIYALQ...QQKLYPGLMDKLASLV-r......
C5D6L7_GEOSW/1-110                  ............MGTLEERIAKLEFHRSLLMEMVDETKKPFYYLVIKANLTKEEVDEVLALCEQLS.EEYEKQKAEGLTIFTPLLLHFAGMLHPS.......LPLEQTVDALL...KQQMFVPLMTELKKLMK.......
A0A0N0VN75_9BACI/1-96               ............--------------MELLIKQMDRTRYPWDYLIMLKKLSKKDVQNLYNVCEELS.KEMEKQKAEGFVTFSPLLKHFRQALPKD.......LPLEDTISALR...TQGYYVQLMDAFQRDI-k......
C2W4T0_BACCE/5-113                  ...........m-D-VVKRLEQAEYYVELLFQMIDEDKCPFYSLIIKKKARKKDIERILSLCEQLN.EQYIKEKQEGFLLFDALLEQFEKALPHQ.......LEVNETAEALI...KQGLFQPLMKEFLRM--na.....
K6CGH6_9BACI/4-112                  .........ykv---LWQRIHLLEYHQKLFVKLLNNPKLEFYKLVIENGLNEQETEKFFDLCDKLS.MKLEEQKAEGYVYFHPLFEQLSAALPAN.......LKMEEVIRACL...LQNLYKPLFLEFEKY--l......
A0A075LHX8_9BACI/1-110              ..........me----EEKKSTLSFHLHLIAETGVLDKYPFRKLLIERNINEEEYAAVLKMLQRLN.RLYKEQKEEGLLDYTSLLLEFVGMMPEK.......LYYWDVLLALReekQDDTYKGLVDELI----lld....
Q65LS9_BACLD/1-110                  ............MNSMEQRLERLEYYIKLLLNNADMEEYPYYKILIEKGLSEEEAKETEKLCEELS.KELEAQKAQGFVMFDHLLTLFAGQLNEK.......LEVHETIFALH...RQGLYKPLMSEFISIIR.......
A0A075JL36_9BACI/19-124             ......lsdkgl----------AEFHLSLISRIIDMRRYPFTRLIMERNITNPEYKELMKLLEDLD.DKYHTQRKEGLLDFSSLLIQFAGMLNEK.......LEPTETIYALN...QEEIHKELMSEFMKIIQ.......
K6DQB8_BACAZ/1-110                  ............MGEIEKRLKKIEYHQQLLLEMIQTQSFPAHRLIVKNDLSEEEVEEVFRLCEELS.LQFEQQKEEGFVYFNPLLTQFINSLNHK.......LDPEETIHAFL...GQEMYVPLMEILKKS--la.....
Q81GY2_BACCR/1-109                  ...........m-D-VVRRLEQAEYYVDLLFKMIDEEKCPFYSLIIKKKARKKDIERILNLCEKLN.DQYVVEKAEGLLLFDALLDQFEKALPHQ.......LEVHETAEALA...KQGLFKPLMNEFLSMI-a......
A0A0N0Z3I1_9BACI/1-73               ...........m--------------------------------------TKEEVDAFLAFCQELA.DQYEQQKAEGLTMFTPLLVQFAGMLHPN.......LPLEQTVDALL...AQQMFVPLMTELKTLIR.......
A0A090IZP4_9BACI/2-111              ............MDELLKRIERLEYYQQLLLEIVNTNDYPFTKLIIQKKLGPEEVLEFQHLCEYMN.NKLQEQKAEGLLYFYPLLKEFSDKLNRK.......LEVKETVESCL...QQYLYVELMTEFKKCL-l......
D5DYZ6_BACMQ/1-110                  ............METLESRVSRLEYYIKLLSGTSEQEAKPFIDLVVRNQLTKKEVEEILILCEDTK.NEYIEQKAEGLTDFVPLLTQFVGMLNYK.......LNPRETVESLR...YQPSYQDVMNEFFEII-q......
A0A0K0GAY0_9FIRM/5-110              ......fgkcdt----------SSFHIQLISKVINLNRYPFIRLIIENNISEKEYNDLMELLNGLN.QTYHQQKEEGLIDFTTLLVRFAGMLNEK.......LNPNETIAALK...KEGYYPSLMNEFTNII-t......
Q5L292_GEOKA/1-110                  ............MESLEKRVAKLEFHQSLLMEMIDETKKPFYSLIIRADLTKEEVDAFLAFCQELA.DQYEQQKAEGLTIFTPLLVQFAGMLHPN.......LPLEQTVDALL...AQQMFVPLMTELKTLIR.......
A0A0M2SSP5_9BACI/4-111              ..........yd---IGEKIKMLEYHQKLLLKMVKETNLKFDFLIVEKSLSQKETGDILALCEKLS.IDMKKQKAEGFVHFHPLFHEFQAGLQPK.......LEAREVIEACV...EQGLFLPLMLEMKKY--c......
A7GLZ0_BACCN/1-109                  ...........m-D-VVKRLEQAEYYVELLFRMIDEDKCPFYSLIIKKKARKKDVERILNLCEGLN.NQYVEEKKEGLLLFDALLDQFEKALPHQ.......LEVTETAEALL...KQGLFQPLMEEFLRII-a......
A0A0M2PHM5_9BACI/1-109              ............MDSLEKRLETLEYYQTLLLQMVETNRFPFYRLVMERGLTRGEIEELYKICDELA.FHHEEQKAQGLVIFTDLLTQFAGQLNEK.......LEIGETVQAMS...KQGLYRSLMNEFLALM-.......
A0A024QDU4_9BACI/4-109              ........yhea--------ETASFHLHLLSKIMDMDKYPFTKLIIERNLTKAEYIELMDRLSLLN.QQFEVQTKEGLLDFSSLLLHFAGMLTEK.......LEPNQTIYALK...EEGVYPSLMETFITILK.......
W1SR64_9BACI/4-112                  .........hel---LLERINLLEYHQKLLIKLLKNPELKFYQLVIENGITKQEKEKFYYLCDELS.MKLEKQKAEGYVYFQPLFDELSAFLPTE.......LSMKEVINACL...VQNIYKPLFLELAKY--l......
A0A059NWB8_9BACI/1-109              ........meke-----NHCETFTFQLKLLLDVEEMKKYPFTKLIIEKNVTEKEYQHTLCLLKELN.HRYEEDMESGLIDHSSLLLHFAGMLCYK.......LPINETLCALH...QEGFYLELTEQLIS---ysh....
A0A098F660_9BACI/3-111              .........lky---LIERIETLEYHMRLAAEALDKTPYEFNKLVIANNLTKDETSRLISLCEDMH.NLMEEQKAEGFLNFHPLFKEFSSKMTPK.......LNPDEVVVACI...KQQMFLPLMNEFKKFI-.......
Q81U43_BACAN/1-109                  ...........m-D-VVRRLEQAEYYVDLLFKMIDEEKCPFYSLIIKKKARKKDIERILNLCEILN.EQYVVEKAEGLLLFDALLDQFEKALPHQ.......LEVHETAEALA...KQGLFKPLMNEFLSMI-a......
A0A023CSI5_GEOSE/1-110              ............MGTLEERIAKLEFHQSLLMEMIDETKKPFYYLVIKANLTKKEVDEVLSLCKQLS.EVYEKQKAEGLMVFTPLLIQFAGMLHPS.......LPLEQTVDALL...KQQMFVPLMSEFKKLMK.......
A6CRL2_9BACI/1-109                  ............MNELMKRIEKLEYQQRLLLEMIPATGHDFNRLVISKGLSENDVKEFFDLCEKLN.KHSQEQKAEGFVFFAPLFKEFTDKLDAR.......LTPEEVIEACI...AQRLFPFLMEQLKR---nl.....
B7GF05_ANOFW/1-109                  ...........m--SIEQRIEKLEYYCSLMLDMIAPEKKPFYALVIRYGLEKEEVESILRLCEQLS.EQYKQQKEEGFVIFTSLFTQFANALHPN.......LPLAETIDALK...QQQLFVPLMTEFQRLL-h......
A8FBL0_BACP2/1-109                  ...........m--SIEERMSQLEYYMELLLTATDMSRYPYYALLMRQQVSKEEAQEIERICAELS.EEMDKQKAQGYVMFDDMLALFAGQLIEK.......LDVHETIFALH...DQGLFQPLMNEFIKIIK.......
YHAI_BACSU/1-110                    ............MDSMDHRIERLEYYIQLLVKTVDMDRYPFYALLIDKGLSKEEGEAVMRICDELS.EELATQKAQGFVTFDKLLALFAGQLNEK.......LDVHETIFALY...EQGLYQELMEVFIDIMK.......
#=GR YHAI_BACSU/1-110         SS    ............X-THHHHHHHHHHHHHHHHTTS-TTT-HHHHHHHHTT--HHHHHHHHHHHHHHH.HHHHHHHHTT----HHHHHHHHHHS-TT.......S-HHHHHHHHH...HTT-SHHHHHHHHHHHH.......
I8AJY3_9BACI/1-110                  ............METIEERVARLEYYNRLTVQSINLRSYPFYSLVMEKHLTEEEVEGVLSLCDVLQ.QHYEVYVDRGYTQFLPLLLHFAGMLSPK.......LKPKATIQALL...AQDLYRDLMLTLDEL--aq.....
#=GC SS_cons                        ............X-THHHHHHHHHHHHHHHHTTS-TTT-HHHHHHHHTT--HHHHHHHHHHHHHHH.HHHHHHHHTT----HHHHHHHHHHS-TT.......S-HHHHHHHHH...HTT-SHHHHHHHHHHHH.......
#=GC seq_cons                       ...............l.cRlcpLEYa.cLLhchlctschPFapLlIc+sLo+cElcclhpLC-cLs.cphccQKAEGhlhFssLLppFsutLst+.......LpscETlpALh...pQslahsLMpEhhchh........
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