GenomeNet

Database: Pfam
Entry: DUF1890
LinkDB: DUF1890
Original site: DUF1890 
#=GF ID   DUF1890
#=GF AC   PF09001.8
#=GF DE   Domain of unknown function (DUF1890)
#=GF AU   Mistry J, Sammut SJ
#=GF SE   pdb_1kjn
#=GF GA   25.00 25.00;
#=GF TC   121.50 121.30;
#=GF NC   19.90 19.70;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 11927849 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Domain
#=GF WK   Domain_of_unknown_function
#=GF DR   INTERPRO; IPR012033;
#=GF CC   This domain is found in a set of hypothetical archaeal proteins.
#=GF SQ   32
#=GS B8GH97_METPE/12-152   AC B8GH97.1
#=GS R9SK40_9EURY/4-147    AC R9SK40.1
#=GS A3CWT6_METMJ/10-149   AC A3CWT6.1
#=GS E1RIN5_METP4/11-150   AC E1RIN5.1
#=GS D3E4S8_METRM/4-146    AC D3E4S8.1
#=GS F0TCE6_METLA/5-147    AC F0TCE6.1
#=GS A6UVE1_META3/4-143    AC A6UVE1.1
#=GS Y452_METJA/5-144      AC Q57894.1
#=GS Q46E53_METBF/7-146    AC Q46E53.1
#=GS L0HI59_METFS/195-335  AC L0HI59.1
#=GS Q2FRW8_METHJ/11-150   AC Q2FRW8.1
#=GS E3GXM9_METFV/4-144    AC E3GXM9.1
#=GS H1Z466_9EURY/11-150   AC H1Z466.1
#=GS B8GI79_METPE/15-154   AC B8GI79.1
#=GS J1ARY7_9EURY/9-148    AC J1ARY7.1
#=GS F6D465_METPW/5-147    AC F6D465.1
#=GS U6EC93_9EURY/6-148    AC U6EC93.1
#=GS G7WND6_METH6/15-154   AC G7WND6.1
#=GS O26871_METTH/10-152   AC O26871.1
#=GS O26871_METTH/10-152   DR PDB; 1KJN B; 10-152;
#=GS O26871_METTH/10-152   DR PDB; 1KJN A; 10-152;
#=GS D7DTT0_METV3/4-143    AC D7DTT0.1
#=GS D5VTC6_METIM/3-141    AC D5VTC6.1
#=GS L0HDF3_METFS/13-152   AC L0HDF3.1
#=GS F6BA72_METIK/4-143    AC F6BA72.1
#=GS A2SPZ3_METLZ/5-145    AC A2SPZ3.1
#=GS Q8PX08_METMA/7-146    AC Q8PX08.1
#=GS A5UJD1_METS3/4-146    AC A5UJD1.1
#=GS Q6LZC8_METMP/4-143    AC Q6LZC8.1
#=GS F4BV71_METCG/1-130    AC F4BV71.1
#=GS A0B5R6_METTP/7-147    AC A0B5R6.1
#=GS Q8TUD9_METAC/7-146    AC Q8TUD9.1
#=GS A7IA47_METB6/19-158   AC A7IA47.1
#=GS Q8TY95_METKA/3-136    AC Q8TY95.1
B8GH97_METPE/12-152              LIILGCPEASAQQALALHVAHNLKKRGAEVLIAGNPAVLNLLKVSDPEKHYITNT..MTLEQCIGDVIENkrDCDLCVVFAHNDAAITYAATMRYLLPERKMVVIVFGK.DPGP..LADAIQF.....PCEIIVDRAVHNPMKLKTMINRV.
R9SK40_9EURY/4-147               LLLLGCPEVPSQTPMAIYAISQLNDMGYEVTVSSNPAAAKLLKVSDPKNCYPHKN..VNIDRFLEDAGAK..DFDLVLGFVHKDSAATYFITYCSVMNYKKAIALVFQR.DASL..VEDYSKMvsentDAEVVSCIAYHNPNPIKVNLNK-a
A3CWT6_METMJ/10-149              LILLGCPQVPVQTSMALYLVHGLKEQGIRPVIAGTQAARKLMEVADPDRHYVSEM..TDLDAAIDEITGKqrDFDLCFVFIHNDSGVAYAGTMAYISK-ARVYALLFGE.HAEE..LAGEIEF.....PCEVVAAKAVHNPMPLKRKLDEV.
E1RIN5_METP4/11-150              LLVMGCPQVPVQTPAVLYISYKLKEEGYKPVAAGTPAADMIIKYSDPGLYYIGEL..KNIDSEVARIVDEgeNYDLCFVFIHNDSGVAYAATMNEILE-CEVIPVVFGK.EYDE..MVKLIDF.....SSRIISAEAVHNPKPLIKEIDRV.
D3E4S8_METRM/4-146               LVLLGCPEAPSQTPIGLYASYKLGQMGYDVTVSSNPAAGKILDISDPEGVYVKKR..VDIEKCLDEIEEG..DYDLLVGCVHKDAAATFFITYYHILK-CKALALVFSR.DAEE..VAEFADMvesstDADIIAVRAFHNPNPIKVRFDK-y
F0TCE6_METLA/5-147               LILLGCPEAPSQTPLAVYTTYKLKEIGYEVTVASTPSAMKLLEVSDPEGFYVTNK..VDIESCLENLEEK..EYDLLFGFVHKDAAAAYFVTFYHILN-TKSVALVFEK.DIDL..LEKFIKDvqdstDSEIVSARAYHNPTPLRVKVDR-y
A6UVE1_META3/4-143               MILLGCPEPPVLIPSCISLINMLKEKGCEVVISANPAALKLIESADPEKYYLKDVgaQSIDGGLKNKF--..PVDLIIGMAHNDAAVNYIITYKSVYD-AKTVAMVFGK.NINNelIEDLMDE.....EIPCQTAKAFHNPTPVIVKLKKI.
Y452_METJA/5-144                 LVIVGCPEPPALIPSVLYLTNQLKKKGFNVIIAANPAALKLLEVADDDKYYLKGVgaVDIDGGLRGIE--..GINKIISFVHNDGGVSYTVTYKAKYN-KPTYAIVFGR.QINK..--DYVETlk.nsNIGVYTARAFHNPMPIVNRIKEI.
Q46E53_METBF/7-146               LLMMGCPEVPIQTSIALYLSHNLTKLGFDVTVAGTTAARKLLKVSDSDGYYVKRL..VDLDKTIVDIIEKrtDFDMCFAFMHNDAGMTYATTMSSISQ-AMMYSIIFGR.NAEA..LAETIEF.....DCEKIVAQDFHNPVRLKNKLDKV.
L0HI59_METFS/195-335             LLVPGCPEVPVQQALALHISHNLRKRGTALTVTGNPAVLNLLKVSDPEKLYLPET..IVLEKCIEELVEKkrDCKLCIVFAHSDAGISYAATMRHLLPASRLIVIIFGK.DPEA..LAALIDF.....PCEKIVDKAVHNPMQLRKKINEV.
Q2FRW8_METHJ/11-150              VLVMGCPKVPVQTSLVLYLSNRMKKAGIRTIIAGTPSARQLIRVADPDGHYTMEM..KDLDATIAALAKGdlTVTESYVFVHNDAGVSYAATMQSLTN-QPVMAIIFGE.EAEQ..IAQEITF.....PCTVIAEPATHNPMSLKNRLEE-a
E3GXM9_METFV/4-144               LIMLGCPEYPIQTPLTIYTSYLLKIKNCKVSIAGNPAALNLVKISDPERRYIDKL..LNIDS--HEIEKN..KWDYLIGFISNDASATYFITFNEILN-VGSLSIVFNE.DKKE..LKELVETikhntNSKIIQARARHNPKPLVKKIDA-f
H1Z466_9EURY/11-150              LLVLGCPQVPTQTAAAMYLAYKLRNAGIRPVIAANPAARMLMKYADPEKHYIDEL..HDLDKMIGDLVEKrqEFSLCFVFVHNDSGLSYAASMNIILNGGVVIPVIFGK.EIES..LKEGINF.....ECSVISGRAEHNPKPLINAME--s
B8GI79_METPE/15-154              LILLGCPQVPVQTSLAIYLCHALKAHGVLPTIAGTTSARKLIDVADPEGHYIGTS..IDLDACIAAIAEKerDFDEIFVFVHNDGGVSYAGTMSAISS-GRLIAVIYGE.HAEE..VAATITF.....PCEKVVAKAVHNPMPLVHKLKEV.
J1ARY7_9EURY/9-148               LIVLGCPEAPVQVSLAIHLAHGLRKAGKTPVITGNPSARALVAMADPEGRYVGEM..IDLDRCIEAMAAKerDFAVSFVLVHVESGVSFAGTISAISG-GKVIVVVFGK.DAES..LSALIDF.....PCEKVTVRTAHKAGPLKAAIAEV.
F6D465_METPW/5-147               LILLGCPEAPSQTPMAVYATYKLTKMGYDVTVASTPSAMKLIEVSDPETFYIKSK..IDIESCLENLESG..AFDLLVGFVHKDAAVSYFVTFYHILN-TTSIALVFEK.DPDL..LEKFEKMvkentDAEIVAVRAYHNPTPMKVKFDR-a
U6EC93_9EURY/6-148               IILLGCPESPSQTPLTIYAAHKLKNMGYEVTVASTPSAKKLVEVADPVEYYVQKK..VDIESCLDNLEEG..EFDLLLGFMAKDAAVSYFVTFYHILN-TKSLALIFHR.DPEK..LENFEDSvrestNAEIASARAYHNPTPLRVRLDR-a
G7WND6_METH6/15-154              LILLGCPEVPVQTSIALYLAYRLRERGDEVVVAGTGAALKLTKLADPLGHYLGET..TNIDRCIASISEGkaDFDQCFAFAHSDAGITYAGTISYISR-ALLFVLIFGR.SAEE..LAETVEF.....DCRKLVAKAVHDPLPLKRLLDEV.
O26871_METTH/10-152              LMVLGCPESPVQIPLAIYTSHKLKKKGFRVTVTANPAALRLVQVADPEGIYTDEM..VDLESCINELAEG..DYEFLAGFVPNDAAAAYLVTFAGILN-TETLAIIFDR.DADV..LEELVNEimetlDAEIIAARAHHNPAPLRVRIDR-f
#=GR O26871_METTH/10-152   SS    EEE---S-STTHHHHHHHHHHHHHCTTEEEEEEE-HHHHHHHHHHSTT-SS-SEE..HHHHHHH--TTS-..EEEEESSHHHHHHHHHHHHHH-SEEE-EEE-S-HHHH.HHHH..HHH---EEEEE--SS--HHHHHHHHHHXXXXXXX-X
D7DTT0_METV3/4-143               LILLGCPEPPLLIPSFMFLLNLLKNKGHQVYVAGNPSALKLIESADPEHHYLKGVgfQPIDNGLKEKF--..DVDYIFGLTHNDAGVNYIITYKMVYN-KDTSALVFGTgDLES..LSKILNE....nGVENKSMRAFHNPTPINVMLKRI.
D5VTC6_METIM/3-141               LILLGCPEPPAMIPSALYLIAKLRKLK-DIVIAGNHAALKLLDVSDVERHYLKGVacIDIDEGLRGLE--..GVEKIVSFVHNDGGVSYTVTYKNKYK-KECLAILFGR.KINE.eFKKTLEE....nDIKVFPVRAFHNPYPLVKTIDKI.
L0HDF3_METFS/13-152              LLVLGCPQVPVQTSIALYLINRLKKAGISPVVAGNKAANTLLVVADQDRHYLGEV..IDLDRAIGLITDGkrTFDLCFVFIHNDAGVSYAATMGAISK-AKLYGLVYGE.HFEE..QAKKIDF.....PCTVVAAKAVHNPLPLKKAIDEV.
F6BA72_METIK/4-143               LVLLGCPEPPVLVPSFIYLTNMLKKKGCEVFVSANPAALKLVETADPEKLYIKNVgfQEIDEGLKEAF--..DVDYIISFVHNDAGVSYTITYMHKYK-AKTIGIVFGR.EMKE..--DFVNTlk.enGVEAYFVRAFHNPTPIVVTLKRI.
A2SPZ3_METLZ/5-145               LILIGCPQIPVQSPLVLYIADFLQDAGHHPVVAANPSAKQLVKTSDPKSHYVSEY..KDVEKAIGELADGtvQYPLIISLIHNDAGLTYTATTSAVAPKSLLISVLFGE.HAYD..LAEEIEY.....PTEKVVAPVTHNTRPLLIKLDEV.
Q8PX08_METMA/7-146               LLMMGCPEVPIQTSIALYLSHKLTQSGFDVTVAGTNAATKLLKISDSDGYYAKKL..VDLDKTLEDIIEKraDFDICFAFMHNDSGVTYAATVSAISQ-VRMYSIVFGR.HAEE..LAQTIEF.....DCEKIVTQDVHNPVRLKNKLDKI.
A5UJD1_METS3/4-146               LILLGCPETPSQTPMSIYASYKLSEKGYDVTIAANPAASKLVKVSDPEKYYIQEM..VDLDDCLANVQEG..EYDLLLGFVHKDAAASYFVTFYQLLQ-TKSIALVFEK.DSEL..LKEYTEIvsentDAEVISVRAFHNPNPIKVNLDKV.
Q6LZC8_METMP/4-143               MIILGCPEPPVLVPAFMFLLNMLKNKGHELIVSANPAALKLIESADPEKYYLTGIgfQPIDEGLKTRT--..EVDHIIGFAHNDAAVNYIVTYKMTHN-VNTSAIVFGK.EFNE..--ELLQIlt.enGVNAEMARAFHNPTPLNVKIKKM.
F4BV71_METCG/1-130               ----------MQISIVIYLAHKLKKEGWDVTVAGTNAPIKLLKTADPEGYYVQKT..ADLDWIIQEIVEKkmDFDACFAFMHSDAGMAYGATFSAISK-AVHYAVVFGK.NAEA..LGESIDY.....PTEKIVAKATHNPGPLKSKIDKV.
A0B5R6_METTP/7-147               LLLMGCPEVPVQMSLVLYLSGALRDKGLKVFIAGNPAALNLARVADRKRCYLGRL..IELERTIADIVEGrrSFGICFAFAHNDAGITYAATVRALLPEARFFVIIFGR.NAEE..LAGTVDF.....DAEKIAERAVHNPLGLKKKIDEV.
Q8TUD9_METAC/7-146               LLMMGCPEIPIQTSIALYLSHKLTNLGFDVTVAGTEAATRLLKVSDSDGYYAKKL..VNLDKTMEDIIEKrsDFDICFAFMHNDAGMTYAATMSA-LSQAKLYSIVFGR.HADE..LAETIEF.....DGEKIVSKDVHNPLRLKNRLDKI.
A7IA47_METB6/19-158              VLVLGCPQVPVQTSVALYLADKLSVAGIAPVIAGNKAAITLLVVADPKRHYLKEV..MDLDRAIAQISDKkrDFDLCFVFIHNDAGVSYAATMAAISK-AKIFPVIYGE.HWEE..MAAQITF.....PCTKIAVKAVHNPLPIKKIIDEV.
Q8TY95_METKA/3-136               VVSLGCPKIPPKISSAIYACYRYDDRA---LVLSTEAGCKLLEYADPEKEYVDET..RTYEKYLEDPD--..AAGILLAFVTNDTELQIAVTLKEVSEPDDARAVCTEE.FEDR..LEDCGFL.....TAPVTGRRWKHDPKRWVKAVEDV.
#=GC SS_cons                     EEE---S-STTHHHHHHHHHHHHHCTTEEEEEEE-HHHHHHHHHHSTT-SS-SEE..HHHHHHH--TTS-..EEEEESSHHHHHHHHHHHHHH-SEEE-EEE-S-HHHH.HHHH..HHH---EEEEE--SS--HHHHHHHHHHXXXXXXX-X
#=GC seq_cons                    LllLGCPEsPlQsshulYlsapL+ctGhclslAusPAAh+LlcluDP-paYlpch..h-lDpslpsltct..-aDlhhuFlHNDAGloYssThptlhp.scshullFG+.ch-p..Ltchlch.....ss-hlss+AhHNPhPL+scl-cl.
//
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