GenomeNet

Database: Pfam
Entry: DUF1890
LinkDB: DUF1890
Original site: DUF1890 
#=GF ID   DUF1890
#=GF AC   PF09001.9
#=GF DE   Domain of unknown function (DUF1890)
#=GF AU   Mistry J, Sammut SJ
#=GF SE   pdb_1kjn
#=GF GA   25.00 25.00;
#=GF TC   122.10 121.90;
#=GF NC   19.70 19.20;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 17690987 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Domain
#=GF WK   Domain_of_unknown_function
#=GF DR   INTERPRO; IPR012033;
#=GF CC   This domain is found in a set of hypothetical archaeal proteins.
#=GF SQ   33
#=GS D3E4S8_METRM/4-146      AC D3E4S8.1
#=GS Q46E53_METBF/7-146      AC Q46E53.1
#=GS Q2FRW8_METHJ/11-150     AC Q2FRW8.1
#=GS H1Z466_9EURY/11-150     AC H1Z466.1
#=GS B8GI79_METPE/15-154     AC B8GI79.1
#=GS A0A0E3S7E3_9EURY/7-146  AC A0A0E3S7E3.1
#=GS D5VTC6_METIM/3-141      AC D5VTC6.1
#=GS L0HDF3_METFS/13-152     AC L0HDF3.1
#=GS A2SPZ3_METLZ/5-145      AC A2SPZ3.1
#=GS Q6LZC8_METMP/4-143      AC Q6LZC8.1
#=GS F4BV71_METCG/1-130      AC F4BV71.1
#=GS A0B5R6_METTP/7-147      AC A0B5R6.1
#=GS Q8TUD9_METAC/7-146      AC Q8TUD9.1
#=GS Q8TY95_METKA/3-136      AC Q8TY95.1
#=GS R9SK40_9EURY/4-147      AC R9SK40.1
#=GS B8GH97_METPE/12-152     AC B8GH97.1
#=GS F0TCE6_METLA/5-147      AC F0TCE6.1
#=GS E1RIN5_METP4/11-150     AC E1RIN5.1
#=GS A3CWT6_METMJ/10-149     AC A3CWT6.1
#=GS Y452_METJA/5-144        AC Q57894.1
#=GS A6UVE1_META3/4-143      AC A6UVE1.1
#=GS L0HI59_METFS/195-335    AC L0HI59.1
#=GS E3GXM9_METFV/4-144      AC E3GXM9.1
#=GS J1ARY7_9EURY/9-148      AC J1ARY7.1
#=GS U6EC93_9EURY/6-148      AC U6EC93.1
#=GS F6D465_METPW/5-147      AC F6D465.1
#=GS O26871_METTH/10-152     AC O26871.1
#=GS O26871_METTH/10-152     DR PDB; 1KJN B; 10-152;
#=GS O26871_METTH/10-152     DR PDB; 1KJN A; 10-152;
#=GS G7WND6_METH6/15-154     AC G7WND6.1
#=GS D7DTT0_METV3/4-143      AC D7DTT0.1
#=GS Q8PX08_METMA/7-146      AC Q8PX08.1
#=GS A5UJD1_METS3/4-146      AC A5UJD1.1
#=GS A0A0E3P090_9EURY/7-146  AC A0A0E3P090.1
#=GS A7IA47_METB6/19-158     AC A7IA47.1
D3E4S8_METRM/4-146                 LVLLGCPEAPSQTPIGLYASYKLGQMGYDVTVSSNPAAGKILDISDPEGVYVKKR..VDIEKCLDEIEEG..DYDLLVGCVHKDAAATFFITYYHILK-CKALALVFSR.DAEE..VAEFADMvesstDADIIAVRAFHNPNPIKVRFDK-y
Q46E53_METBF/7-146                 LLMMGCPEVPIQTSIALYLSHNLTKLGFDVTVAGTTAARKLLKVSDSDGYYVKRL..VDLDKTIVDIIEKrtDFDMCFAFMHNDAGMTYATTMSSISQ-AMMYSIIFGR.NAEA..LAETIEF.....DCEKIVAQDFHNPVRLKNKLDKV.
Q2FRW8_METHJ/11-150                VLVMGCPKVPVQTSLVLYLSNRMKKAGIRTIIAGTPSARQLIRVADPDGHYTMEM..KDLDATIAALAKGdlTVTESYVFVHNDAGVSYAATMQSLTN-QPVMAIIFGE.EAEQ..IAQEITF.....PCTVIAEPATHNPMSLKNRLEE-a
H1Z466_9EURY/11-150                LLVLGCPQVPTQTAAAMYLAYKLRNAGIRPVIAANPAARMLMKYADPEKHYIDEL..HDLDKMIGDLVEKrqEFSLCFVFVHNDSGLSYAASMNIILNGGVVIPVIFGK.EIES..LKEGINF.....ECSVISGRAEHNPKPLINAME--s
B8GI79_METPE/15-154                LILLGCPQVPVQTSLAIYLCHALKAHGVLPTIAGTTSARKLIDVADPEGHYIGTS..IDLDACIAAIAEKerDFDEIFVFVHNDGGVSYAGTMSAISS-GRLIAVIYGE.HAEE..VAATITF.....PCEKVVAKAVHNPMPLVHKLKEV.
A0A0E3S7E3_9EURY/7-146             LLMMGCPEVPIQTSIALYLSHKLTKLGFDVTVAGTGAATQLLKVSDSDGYYAKKL..ANLDNTIEDIIEKraDFDICFAFMHNDAGMTYAATMGAISQ-GKLYSIVFGR.NAEA..LAETIEF.....DCEKIVAKDVHNPIRLKNKLDKV.
D5VTC6_METIM/3-141                 LILLGCPEPPAMIPSALYLIAKLRKLK-DIVIAGNHAALKLLDVSDVERHYLKGVacIDIDEGLRGLE--..GVEKIVSFVHNDGGVSYTVTYKNKYK-KECLAILFGR.KINE.eFKKTLEE....nDIKVFPVRAFHNPYPLVKTIDKI.
L0HDF3_METFS/13-152                LLVLGCPQVPVQTSIALYLINRLKKAGISPVVAGNKAANTLLVVADQDRHYLGEV..IDLDRAIGLITDGkrTFDLCFVFIHNDAGVSYAATMGAISK-AKLYGLVYGE.HFEE..QAKKIDF.....PCTVVAAKAVHNPLPLKKAIDEV.
A2SPZ3_METLZ/5-145                 LILIGCPQIPVQSPLVLYIADFLQDAGHHPVVAANPSAKQLVKTSDPKSHYVSEY..KDVEKAIGELADGtvQYPLIISLIHNDAGLTYTATTSAVAPKSLLISVLFGE.HAYD..LAEEIEY.....PTEKVVAPVTHNTRPLLIKLDEV.
Q6LZC8_METMP/4-143                 MIILGCPEPPVLVPAFMFLLNMLKNKGHELIVSANPAALKLIESADPEKYYLTGIgfQPIDEGLKTRT--..EVDHIIGFAHNDAAVNYIVTYKMTHN-VNTSAIVFGK.EFNE..--ELLQIlt.enGVNAEMARAFHNPTPLNVKIKKM.
F4BV71_METCG/1-130                 ----------MQISIVIYLAHKLKKEGWDVTVAGTNAPIKLLKTADPEGYYVQKT..ADLDWIIQEIVEKkmDFDACFAFMHSDAGMAYGATFSAISK-AVHYAVVFGK.NAEA..LGESIDY.....PTEKIVAKATHNPGPLKSKIDKV.
A0B5R6_METTP/7-147                 LLLMGCPEVPVQMSLVLYLSGALRDKGLKVFIAGNPAALNLARVADRKRCYLGRL..IELERTIADIVEGrrSFGICFAFAHNDAGITYAATVRALLPEARFFVIIFGR.NAEE..LAGTVDF.....DAEKIAERAVHNPLGLKKKIDEV.
Q8TUD9_METAC/7-146                 LLMMGCPEIPIQTSIALYLSHKLTNLGFDVTVAGTEAATRLLKVSDSDGYYAKKL..VNLDKTMEDIIEKrsDFDICFAFMHNDAGMTYAATMSA-LSQAKLYSIVFGR.HADE..LAETIEF.....DGEKIVSKDVHNPLRLKNRLDKI.
Q8TY95_METKA/3-136                 VVSLGCPKIPPKISSAIYACYRYDDRA---LVLSTEAGCKLLEYADPEKEYVDET..RTYEKYLEDPD--..AAGILLAFVTNDTELQIAVTLKEVSEPDDARAVCTEE.FEDR..LEDCGFL.....TAPVTGRRWKHDPKRWVKAVEDV.
R9SK40_9EURY/4-147                 LLLLGCPEVPSQTPMAIYAISQLNDMGYEVTVSSNPAAAKLLKVSDPKNCYPHKN..VNIDRFLEDAGAK..DFDLVLGFVHKDSAATYFITYCSVMNYKKAIALVFQR.DASL..VEDYSKMvsentDAEVVSCIAYHNPNPIKVNLNK-a
B8GH97_METPE/12-152                LIILGCPEASAQQALALHVAHNLKKRGAEVLIAGNPAVLNLLKVSDPEKHYITNT..MTLEQCIGDVIENkrDCDLCVVFAHNDAAITYAATMRYLLPERKMVVIVFGK.DPGP..LADAIQF.....PCEIIVDRAVHNPMKLKTMINRV.
F0TCE6_METLA/5-147                 LILLGCPEAPSQTPLAVYTTYKLKEIGYEVTVASTPSAMKLLEVSDPEGFYVTNK..VDIESCLENLEEK..EYDLLFGFVHKDAAAAYFVTFYHILN-TKSVALVFEK.DIDL..LEKFIKDvqdstDSEIVSARAYHNPTPLRVKVDR-y
E1RIN5_METP4/11-150                LLVMGCPQVPVQTPAVLYISYKLKEEGYKPVAAGTPAADMIIKYSDPGLYYIGEL..KNIDSEVARIVDEgeNYDLCFVFIHNDSGVAYAATMNEILE-CEVIPVVFGK.EYDE..MVKLIDF.....SSRIISAEAVHNPKPLIKEIDRV.
A3CWT6_METMJ/10-149                LILLGCPQVPVQTSMALYLVHGLKEQGIRPVIAGTQAARKLMEVADPDRHYVSEM..TDLDAAIDEITGKqrDFDLCFVFIHNDSGVAYAGTMAYISK-ARVYALLFGE.HAEE..LAGEIEF.....PCEVVAAKAVHNPMPLKRKLDEV.
Y452_METJA/5-144                   LVIVGCPEPPALIPSVLYLTNQLKKKGFNVIIAANPAALKLLEVADDDKYYLKGVgaVDIDGGLRGIE--..GINKIISFVHNDGGVSYTVTYKAKYN-KPTYAIVFGR.QINK..--DYVETlk.nsNIGVYTARAFHNPMPIVNRIKEI.
A6UVE1_META3/4-143                 MILLGCPEPPVLIPSCISLINMLKEKGCEVVISANPAALKLIESADPEKYYLKDVgaQSIDGGLKNKF--..PVDLIIGMAHNDAAVNYIITYKSVYD-AKTVAMVFGK.NINNelIEDLMDE.....EIPCQTAKAFHNPTPVIVKLKKI.
L0HI59_METFS/195-335               LLVPGCPEVPVQQALALHISHNLRKRGTALTVTGNPAVLNLLKVSDPEKLYLPET..IVLEKCIEELVEKkrDCKLCIVFAHSDAGISYAATMRHLLPASRLIVIIFGK.DPEA..LAALIDF.....PCEKIVDKAVHNPMQLRKKINEV.
E3GXM9_METFV/4-144                 LIMLGCPEYPIQTPLTIYTSYLLKIKNCKVSIAGNPAALNLVKISDPERRYIDKL..LNIDS--HEIEKN..KWDYLIGFISNDASATYFITFNEILN-VGSLSIVFNE.DKKE..LKELVETikhntNSKIIQARARHNPKPLVKKIDA-f
J1ARY7_9EURY/9-148                 LIVLGCPEAPVQVSLAIHLAHGLRKAGKTPVITGNPSARALVAMADPEGRYVGEM..IDLDRCIEAMAAKerDFAVSFVLVHVESGVSFAGTISAISG-GKVIVVVFGK.DAES..LSALIDF.....PCEKVTVRTAHKAGPLKAAIAEV.
U6EC93_9EURY/6-148                 IILLGCPESPSQTPLTIYAAHKLKNMGYEVTVASTPSAKKLVEVADPVEYYVQKK..VDIESCLDNLEEG..EFDLLLGFMAKDAAVSYFVTFYHILN-TKSLALIFHR.DPEK..LENFEDSvrestNAEIASARAYHNPTPLRVRLDR-a
F6D465_METPW/5-147                 LILLGCPEAPSQTPMAVYATYKLTKMGYDVTVASTPSAMKLIEVSDPETFYIKSK..IDIESCLENLESG..AFDLLVGFVHKDAAVSYFVTFYHILN-TTSIALVFEK.DPDL..LEKFEKMvkentDAEIVAVRAYHNPTPMKVKFDR-a
O26871_METTH/10-152                LMVLGCPESPVQIPLAIYTSHKLKKKGFRVTVTANPAALRLVQVADPEGIYTDEM..VDLESCINELAEG..DYEFLAGFVPNDAAAAYLVTFAGILN-TETLAIIFDR.DADV..LEELVNEimetlDAEIIAARAHHNPAPLRVRIDR-f
#=GR O26871_METTH/10-152     SS    EEE---S-STTHHHHHHHHHHHHHCTTEEEEEEE-HHHHHHHHHHSTT-SS-SEE..EEHHHHHHH--TT..S-SEEEEEESSHHHHHHHHHHHHHH--SEEEEEEE-S.-HHH..HHHHHHHHHHH---EEEEE--SS--HHHHHHHHH-H
G7WND6_METH6/15-154                LILLGCPEVPVQTSIALYLAYRLRERGDEVVVAGTGAALKLTKLADPLGHYLGET..TNIDRCIASISEGkaDFDQCFAFAHSDAGITYAGTISYISR-ALLFVLIFGR.SAEE..LAETVEF.....DCRKLVAKAVHDPLPLKRLLDEV.
D7DTT0_METV3/4-143                 LILLGCPEPPLLIPSFMFLLNLLKNKGHQVYVAGNPSALKLIESADPEHHYLKGVgfQPIDNGLKEKF--..DVDYIFGLTHNDAGVNYIITYKMVYN-KDTSALVFGTgDLES..LSKILNE....nGVENKSMRAFHNPTPINVMLKRI.
Q8PX08_METMA/7-146                 LLMMGCPEVPIQTSIALYLSHKLTQSGFDVTVAGTNAATKLLKISDSDGYYAKKL..VDLDKTLEDIIEKraDFDICFAFMHNDSGVTYAATVSAISQ-VRMYSIVFGR.HAEE..LAQTIEF.....DCEKIVTQDVHNPVRLKNKLDKI.
A5UJD1_METS3/4-146                 LILLGCPETPSQTPMSIYASYKLSEKGYDVTIAANPAASKLVKVSDPEKYYIQEM..VDLDDCLANVQEG..EYDLLLGFVHKDAAASYFVTFYQLLQ-TKSIALVFEK.DSEL..LKEYTEIvsentDAEVISVRAFHNPNPIKVNLDKV.
A0A0E3P090_9EURY/7-146             LLMMGCPEVPIQTSIALYLSHKLTNSGFDVTVAGTGAATKLLRVSDSDSYYVKNL..VNLDKTLKDVIEKraDFDICFAFMHNDAGMTYAATMSA-LSEAKLYSIVFGR.NAEA..LAETIEF.....DCDRIIEKAAHNPVQLKKKLDKV.
A7IA47_METB6/19-158                VLVLGCPQVPVQTSVALYLADKLSVAGIAPVIAGNKAAITLLVVADPKRHYLKEV..MDLDRAIAQISDKkrDFDLCFVFIHNDAGVSYAATMAAISK-AKIFPVIYGE.HWEE..MAAQITF.....PCTKIAVKAVHNPLPIKKIIDEV.
#=GC SS_cons                       EEE---S-STTHHHHHHHHHHHHHCTTEEEEEEE-HHHHHHHHHHSTT-SS-SEE..EEHHHHHHH--TT..S-SEEEEEESSHHHHHHHHHHHHHH--SEEEEEEE-S.-HHH..HHHHHHHHHHH---EEEEE--SS--HHHHHHHHH-H
#=GC seq_cons                      LllLGCPEsPlQTslAlYLuapL+ctGhcVslAGsPAAh+LlcVuDP-paYlpch..h-lDpslpslt-t..-aDlhhuFsHNDAGloYssThptlhs.schhullFG+.cs-p..Lschl-h.....ss-hlss+AhHNPhPL+s+lDcl.
//
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