GenomeNet

Database: Pfam
Entry: DUF1922
LinkDB: DUF1922
Original site: DUF1922 
#=GF ID   DUF1922
#=GF AC   PF09082.7
#=GF DE   Domain of unknown function (DUF1922)
#=GF AU   Sammut SJ
#=GF SE   pdb_1gh9
#=GF GA   20.70 20.70;
#=GF TC   20.70 20.90;
#=GF NC   20.60 20.50;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 11927849 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Domain
#=GF WK   Domain_of_unknown_function
#=GF RN   [1]
#=GF RM   11017201
#=GF RT   Structural proteomics of an archaeon. 
#=GF RA   Christendat D, Yee A, Dharamsi A, Kluger Y, Savchenko A, Cort
#=GF RA   JR, Booth V, Mackereth CD, Saridakis V, Ekiel I, Kozlov G,
#=GF RA   Maxwell KL, Wu N, McIntosh LP, Gehring K, Kennedy MA, Davidson
#=GF RA   AR, Pai EF, Gerstein M, Edwards AM, Arrowsmith CH; 
#=GF RL   Nat Struct Biol 2000;7:903-909.
#=GF DR   INTERPRO; IPR015166;
#=GF DR   SCOP; 1gh9; fa;
#=GF CC   Members of this family consist of a beta-sheet region followed
#=GF CC   by an alpha-helix and an unstructured C-terminus. The beta-sheet
#=GF CC   region contains a CXCX...XCXC sequence with Cys residues located
#=GF CC   in two proximal loops and pointing towards each other. This
#=GF CC   precise function of this set of bacterial proteins is, as yet,
#=GF CC   unknown [1].
#=GF SQ   24
#=GS D7EA10_METEZ/4-74   AC D7EA10.1
#=GS G7WKM8_METH6/2-69   AC G7WKM8.1
#=GS E1RDL2_METP4/12-78  AC E1RDL2.1
#=GS F2KNB2_ARCVS/2-66   AC F2KNB2.1
#=GS D3TBQ6_ACIB4/1-42   AC D3TBQ6.1
#=GS L0HIF0_METFS/2-70   AC L0HIF0.1
#=GS H1Z128_9EURY/2-68   AC H1Z128.1
#=GS B8GE38_METPE/2-70   AC B8GE38.1
#=GS Q2NI59_METST/3-69   AC Q2NI59.1
#=GS U6EF32_9EURY/2-68   AC U6EF32.1
#=GS F4BW42_METCG/1-65   AC F4BW42.1
#=GS E3GWV7_METFV/2-68   AC E3GWV7.1
#=GS A5UM02_METS3/7-73   AC A5UM02.1
#=GS E1QQM3_VULDI/2-61   AC E1QQM3.1
#=GS PA84_METTH/2-68     AC O27252.1
#=GS PA84_METTH/2-68     DR PDB; 1GH9 A; 2-68;
#=GS A7I836_METB6/4-73   AC A7I836.1
#=GS Q12UN9_METBU/7-75   AC Q12UN9.1
#=GS F0T8Q0_METLA/2-68   AC F0T8Q0.1
#=GS F6D2E8_METPW/2-68   AC F6D2E8.1
#=GS A8MDT3_CALMQ/3-62   AC A8MDT3.1
#=GS D3E077_METRM/2-68   AC D3E077.1
#=GS A3CUS1_METMJ/2-72   AC A3CUS1.1
#=GS R9SN16_9EURY/2-68   AC R9SN16.1
#=GS A2ST71_METLZ/8-73   AC A2ST71.1
D7EA10_METEZ/4-74              yavivctkcrqhaq-------.----IIENDNKKTTKC.QnCGSTLNVDKLRFFYQCDNLDDAVSARTKVQSQIQGQEQIQ---dis...........
G7WKM8_METH6/2-69              ..............YLIFRCSgCGRHLYAEEGSATRTC.P.CGKRIKLGQVKVLSRARDEREAGDLVRALQVEGRGMTGFSPA-g.............
E1RDL2_METP4/12-78             ..............YLIIRCPgCLSFTYVDKYQKWKLCpV.CSETINPGKVQVYLDVETPSEAEIITRQLQK------------ylkekrkkdl....
F2KNB2_ARCVS/2-66              ..............FVVFRCRkCGRYLYAKESTKTKMC.V.CGCRNNLKRVRKLARAETELEAGEIVRRLQG------------sgtefdsld.....
D3TBQ6_ACIB4/1-42              ..............--MYRCVrCGRPLTSELGVQQLEC.E.CGSRMFYKERPNMKK----------------------------ivya..........
L0HIF0_METFS/2-70              ..............YLIIRCPqCVTFTYVDNFQRWKLCpT.CGHAYEVSKAPMYLEVQDHHEAEHIVRQMEKHLH---------ankkkdfsa.....
H1Z128_9EURY/2-68              ..............YLIIRCPgCQAFSYADRYQKYKLC.PdCGYTMNIKSCPVYLDVKTFPQAEAIVKELE-------------aylhkrnkkel...
B8GE38_METPE/2-70              ............fh--VLRCPgCSTFTYVDRFERWKLChV.CGEVINAKRAPVYLDVRDYRDAEDVVVQLEE------------flhaagrddlsr..
Q2NI59_METST/3-69              ..............YLIYRCD.CGRVLYSKETTKTKKC.T.CGKTLNVKKRRILKIAQSSTQATETVQQMQEEIYGGSIFRTAN..............
U6EF32_9EURY/2-68              ..............YLVFRCD.CGRAVYAREGVRQKKC.V.CGKNLNVKERRILAKTQDAQDAAEKVQELQEEKYGGAYFTTAN..............
F4BW42_METCG/1-65              ..............--MFRCS.CGRHLYSPDDAKTRTC.P.CGKRTALSRVRILATAPDARAAGEIVRRLQLGDSGLTGFSQA-k.............
E3GWV7_METFV/2-68              ..............YLIFRCD.CGRALYVHESNSVKRC.V.CGRLIKVKSRRILGKVNSFEEASEIVRKLQEEKYGKAVLMTAD..............
A5UM02_METS3/7-73              ..............YFIFRCD.CGRVLYAKEGVATRKC.V.CGKTIKVKQRRIFKKVETREEASLAVQEMQDEIYGNTDFKRA-s.............
E1QQM3_VULDI/2-61              ..............YLIIACPrCGNYSVVRDTAKTHQC.PyCGYVMRIEEASIIARAKNGKEARELILKLK-------------tpre..........
PA84_METTH/2-68                ..............YIIFRCD.CGRALYSREGAKTRKC.V.CGRTVNVKDRRIFGRADDFEEASELVRKLQEEKYGSCHFTNP-s.............
#=GR PA84_METTH/2-68     SS    ..............ETT-SEE.ETTTEEEE--SSS-BS.-.SHHHHHHHHHHHSS---S-TTSS-TTXXXXXXXXXXXXXXXX-X.............
A7I836_METB6/4-73              ..............YLILRCPgCRAFSYVDRFQKWKLC.PaCGHAFEVAKVPAYLEVGDYHDAEHIIRQMEKHL----------hthkkkdftpe...
Q12UN9_METBU/7-75              ...viacpkcrksa-------.---QLIEDKDAKTTKC.QlCGTNLHIRKLRVFHTGEDIEEARAVRTKVQAQLLGEKQST---tms...........
F0T8Q0_METLA/2-68              ..............YIVFRCD.CGRAVYSKQGTATKKC.V.CGKTLKVKERRILAMTEEAEQASDKVRELQEEKYGGAIFTTAD..............
F6D2E8_METPW/2-68              ..............YLIFRCD.CGRTMYSKEEVARKKC.V.CGKNLKVKERRILAKTDNAESASQMVRKFQEEKYGGLQFTTAD..............
A8MDT3_CALMQ/3-62              ..............YLIVRCPrCSMPSAVRLGSVSHMC.PyCGSRFRISEGTIITKARNGREASELIRRI--------------ltqsh.........
D3E077_METRM/2-68              ..............YVIFRCD.CGRVLYAKQGVKTRKC.T.CGKTIKVKSRRILQKVETANDASLAVQKMQEEIYGGTAFKTAD..............
A3CUS1_METMJ/2-72              ..............YLVIRCPgCKTFNYVDRYQRWRLC.PmCGEVINVQRAPVYLDVDDFLDAEQVVEQLES------------ylhqtgkkdlteqd
R9SN16_9EURY/2-68              ..............YLIFRCD.CGRVLYAKKGQATRKC.V.CGKVLKVKERRIFKKVATREEASKAVQDMQEEIHGFKGFQTAN..............
A2ST71_METLZ/8-73              ..........svig-----CMkCRRRIVADLSYATKTC.I.CGNKIDLTQTKLLAVCESADEAGELLRRMQTAKN---------sgftsank......
#=GC SS_cons                   ..............ETT-SEE.ETTTEEEE--SSS-BS.-.SHHHHHHHHHHHSS---S-TTSS-TTXXXXXXXXXXXXXXXX-X.............
#=GC seq_cons                  ..............YllhRCs.CuphlYsccss+s+pC.s.CGcslplcct+lhtcscshc-AsclVpclQpth........................
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