GenomeNet

Database: Pfam
Entry: DUF1922
LinkDB: DUF1922
Original site: DUF1922 
#=GF ID   DUF1922
#=GF AC   PF09082.6
#=GF DE   Domain of unknown function (DUF1922)
#=GF AU   Sammut SJ
#=GF SE   pdb_1gh9
#=GF GA   20.70 20.70;
#=GF TC   20.70 20.90;
#=GF NC   20.60 20.50;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 80369284 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Domain
#=GF WK   Domain_of_unknown_function
#=GF RN   [1]
#=GF RM   11017201
#=GF RT   Structural proteomics of an archaeon. 
#=GF RA   Christendat D, Yee A, Dharamsi A, Kluger Y, Savchenko A, Cort
#=GF RA   JR, Booth V, Mackereth CD, Saridakis V, Ekiel I, Kozlov G,
#=GF RA   Maxwell KL, Wu N, McIntosh LP, Gehring K, Kennedy MA, Davidson
#=GF RA   AR, Pai EF, Gerstein M, Edwards AM, Arrowsmith CH; 
#=GF RL   Nat Struct Biol 2000;7:903-909.
#=GF DR   INTERPRO; IPR015166;
#=GF DR   SCOP; 1gh9; fa;
#=GF CC   Members of this family consist of a beta-sheet region followed
#=GF CC   by an alpha-helix and an unstructured C-terminus. The beta-sheet
#=GF CC   region contains a CXCX...XCXC sequence with Cys residues located
#=GF CC   in two proximal loops and pointing towards each other. This
#=GF CC   precise function of this set of bacterial proteins is, as yet,
#=GF CC   unknown [1].
#=GF SQ   37
#=GS E4V9J5_BIFBI/1-61     AC E4V9J5.1
#=GS G7WKM8_METH6/2-69     AC G7WKM8.1
#=GS D5PF81_9MYCO/171-224  AC D5PF81.1
#=GS R7PXW0_9EURY/2-68     AC R7PXW0.1
#=GS B9AF12_METSM/7-73     AC B9AF12.1
#=GS L0HIF0_METFS/2-70     AC L0HIF0.1
#=GS B8GE38_METPE/2-70     AC B8GE38.1
#=GS K6U8Z1_9EURY/2-68     AC K6U8Z1.1
#=GS Q2NI59_METST/3-69     AC Q2NI59.1
#=GS U6EF32_9EURY/2-68     AC U6EF32.1
#=GS F4BW42_METCG/1-65     AC F4BW42.1
#=GS E3GWV7_METFV/2-68     AC E3GWV7.1
#=GS A7I836_METB6/4-73     AC A7I836.1
#=GS F0T8Q0_METSL/2-68     AC F0T8Q0.1
#=GS F6D2E8_METSW/2-68     AC F6D2E8.1
#=GS D2ZPK4_METSM/7-73     AC D2ZPK4.1
#=GS R9SN16_9EURY/2-68     AC R9SN16.1
#=GS D7EA10_METEZ/4-74     AC D7EA10.1
#=GS K2QYL2_METFO/2-68     AC K2QYL2.1
#=GS E1RDL2_METP4/12-78    AC E1RDL2.1
#=GS I7KCQ6_METBM/2-72     AC I7KCQ6.1
#=GS F2KNB2_ARCVS/2-66     AC F2KNB2.1
#=GS D3TBQ6_ACIB4/1-42     AC D3TBQ6.1
#=GS H1Z128_9EURY/2-68     AC H1Z128.1
#=GS D6ZV33_BIFLJ/34-84    AC D6ZV33.1
#=GS A5UM02_METS3/7-73     AC A5UM02.1
#=GS PA84_METTH/2-68       AC O27252.1
#=GS PA84_METTH/2-68       DR PDB; 1GH9 A; 2-68;
#=GS E1QQM3_VULDI/2-61     AC E1QQM3.1
#=GS T2GK21_METTF/2-68     AC T2GK21.1
#=GS F0QVK3_VULM7/1-57     AC F0QVK3.1
#=GS Q12UN9_METBU/7-75     AC Q12UN9.1
#=GS D9PY42_METTM/2-68     AC D9PY42.1
#=GS A8MDT3_CALMQ/3-62     AC A8MDT3.1
#=GS D3E077_METRM/2-68     AC D3E077.1
#=GS A3CUS1_METMJ/2-72     AC A3CUS1.1
#=GS K2M4C4_BIFBI/78-139   AC K2M4C4.1
#=GS A2ST71_METLZ/8-73     AC A2ST71.1
E4V9J5_BIFBI/1-61                ...........mcp------E.CGREVLAAKGETLRLC.K.CGSPINV.TELREQSRAK--------------------------aeaihltktpagmsqwlrenygy
G7WKM8_METH6/2-69                ..............YLIFRCSgCGRHLYAEEGSATRTC.P.CGKRIKL.GQVKVLSRARDEREAGDLVRALQVEGRGMTGFSPA-g......................
D5PF81_9MYCO/171-224             .............i------E.CGTMLYADTDNRTTTC.PeCGQTIDVeKNQRETAKSRDLRTTTEILE----------------lltnid.................
R7PXW0_9EURY/2-68                ..............YFIFRCD.CGRVLYAKEGVATRKC.V.CGKTIKV.KQRRIFKKVETREEASLAVQEMQDEIYGNTDFKRA-s......................
B9AF12_METSM/7-73                ..............YFIFRCD.CGRVLYAKEGVATRKC.V.CGKTIKV.KQRRIFKKVETREEASLAVQEMQDEIYGNTDFKRA-s......................
L0HIF0_METFS/2-70                ..............YLIIRCPqCVTFTYVDNFQRWKLCpT.CGHAYEV.SKAPMYLEVQDHHEAEHIVRQMEKHLH---------ankkkdfsa..............
B8GE38_METPE/2-70                ............fh--VLRCPgCSTFTYVDRFERWKLChV.CGEVINA.KRAPVYLDVRDYRDAEDVVVQLEE------------flhaagrddlsr...........
K6U8Z1_9EURY/2-68                ..............YLIFRCD.CGRAVYAKEGVNVKKC.V.CGKNLKV.AQRRIIAKTEDHQTASEKVQELQEEKYGGAYFTTAD.......................
Q2NI59_METST/3-69                ..............YLIYRCD.CGRVLYSKETTKTKKC.T.CGKTLNV.KKRRILKIAQSSTQATETVQQMQEEIYGGSIFRTAN.......................
U6EF32_9EURY/2-68                ..............YLVFRCD.CGRAVYAREGVRQKKC.V.CGKNLNV.KERRILAKTQDAQDAAEKVQELQEEKYGGAYFTTAN.......................
F4BW42_METCG/1-65                ..............--MFRCS.CGRHLYSPDDAKTRTC.P.CGKRTAL.SRVRILATAPDARAAGEIVRRLQLGDSGLTGFSQA-k......................
E3GWV7_METFV/2-68                ..............YLIFRCD.CGRALYVHESNSVKRC.V.CGRLIKV.KSRRILGKVNSFEEASEIVRKLQEEKYGKAVLMTAD.......................
A7I836_METB6/4-73                ..............YLILRCPgCRAFSYVDRFQKWKLC.PaCGHAFEV.AKVPAYLEVGDYHDAEHIIRQMEKHL----------hthkkkdftpe............
F0T8Q0_METSL/2-68                ..............YIVFRCD.CGRAVYSKQGTATKKC.V.CGKTLKV.KERRILAMTEEAEQASDKVRELQEEKYGGAIFTTAD.......................
F6D2E8_METSW/2-68                ..............YLIFRCD.CGRTMYSKEEVARKKC.V.CGKNLKV.KERRILAKTDNAESASQMVRKFQEEKYGGLQFTTAD.......................
D2ZPK4_METSM/7-73                ..............YFIFRCD.CGRVLYAKEGVATRKC.V.CGKTIKV.KQRRIFKKVETREEASLAVQEMQDEIYGNTDFKRA-s......................
R9SN16_9EURY/2-68                ..............YLIFRCD.CGRVLYAKKGQATRKC.V.CGKVLKV.KERRIFKKVATREEASKAVQDMQEEIHGFKGFQTAN.......................
D7EA10_METEZ/4-74                yavivctkcrqhaq-------.----IIENDNKKTTKC.QnCGSTLNV.DKLRFFYQCDNLDDAVSARTKVQSQIQGQEQIQ---dis....................
K2QYL2_METFO/2-68                ..............YLIFRCD.CGRAVYAKEGVARKKC.V.CGKSLKV.AERRIIAKTEDNQTASEKVQELQEEKYGGAYFTTAD.......................
E1RDL2_METP4/12-78               ..............YLIIRCPgCLSFTYVDKYQKWKLCpV.CSETINP.GKVQVYLDVETPSEAEIITRQLQK------------ylkekrkkdl.............
I7KCQ6_METBM/2-72                ..............YLVIRCPgCKTFTYVDRYQRWRLC.PmCGEAINI.GKAPVYLDADDFQDAECVVEQLES------------ylhrtgkkdltesd.........
F2KNB2_ARCVS/2-66                ..............FVVFRCRkCGRYLYAKESTKTKMC.V.CGCRNNL.KRVRKLARAETELEAGEIVRRLQG------------sgtefdsld..............
D3TBQ6_ACIB4/1-42                ..............--MYRCVrCGRPLTSELGVQQLEC.E.CGSRMFY.KERPNMKK----------------------------ivya...................
H1Z128_9EURY/2-68                ..............YLIIRCPgCQAFSYADRYQKYKLC.PdCGYTMNI.KSCPVYLDVKTFPQAEAIVKELE-------------aylhkrnkkel............
D6ZV33_BIFLJ/34-84               .........riigv-----CPeCGREVMAAKGEALRLC.K.CGDPVNV.AELREQSQAE--------------------------aesihltkt..............
A5UM02_METS3/7-73                ..............YFIFRCD.CGRVLYAKEGVATRKC.V.CGKTIKV.KQRRIFKKVETREEASLAVQEMQDEIYGNTDFKRA-s......................
PA84_METTH/2-68                  ..............YIIFRCD.CGRALYSREGAKTRKC.V.CGRTVNV.KDRRIFGRADDFEEASELVRKLQEEKYGSCHFTNP-s......................
#=GR PA84_METTH/2-68       SS    ..............EEEEEET.TS--EEEETT-SEEEE.T.TTEEEE-.-SSS-BS--SSHHHHHHHHHHHSS---S-TTSS-T-T......................
E1QQM3_VULDI/2-61                ..............YLIIACPrCGNYSVVRDTAKTHQC.PyCGYVMRI.EEASIIARAKNGKEARELILKLK-------------tpre...................
T2GK21_METTF/2-68                ..............YIIFRCD.CGRALYSREGAKTRKC.V.CGRTVNV.KDRRIFGRADDFEEASELVRKLQEEKYGSCHFANP-s......................
F0QVK3_VULM7/1-57                ............ma-----CPkCGNYSITRDTTKTHQC.PyCGYVMRI.EEVTIIARAKNGKEAREIILKLKT------------pke....................
Q12UN9_METBU/7-75                ...viacpkcrksa-------.---QLIEDKDAKTTKC.QlCGTNLHI.RKLRVFHTGEDIEEARAVRTKVQAQLLGEKQST---tms....................
D9PY42_METTM/2-68                ..............YVIFRCD.CGRALYSKEGADTRKC.V.CGRTLKV.KTRRIFGKAGSFQEAAEIVRKLQEERYGTCHFTN--pv.....................
A8MDT3_CALMQ/3-62                ..............YLIVRCPrCSMPSAVRLGSVSHMC.PyCGSRFRI.SEGTIITKARNGREASELIRRI--------------ltqsh..................
D3E077_METRM/2-68                ..............YVIFRCD.CGRVLYAKQGVKTRKC.T.CGKTIKV.KSRRILQKVETANDASLAVQKMQEEIYGGTAFKTAD.......................
A3CUS1_METMJ/2-72                ..............YLVIRCPgCKTFNYVDRYQRWRLC.PmCGEVINV.QRAPVYLDVDDFLDAEQVVEQLES------------ylhqtgkkdlteqd.........
K2M4C4_BIFBI/78-139              ........ivgmcp------E.CGREVLAAKGETLRLC.K.CGSPINV.TELREQSRAK--------------------------aeaihltktpagmsqwlreny..
A2ST71_METLZ/8-73                ..........svig-----CMkCRRRIVADLSYATKTC.I.CGNKIDL.TQTKLLAVCESADEAGELLRRMQTAKN---------sgftsank...............
#=GC SS_cons                     ..............EEEEEET.TS--EEEETT-SEEEE.T.TTEEEE-.-SSS-BS--SSHHHHHHHHHHHSS---S-TTSS-T-T......................
#=GC seq_cons                    ..............YhlhRCs.CGRhlYuccssps+pC.s.CGcslpV.cctRlht+scshp-AsphVpchQpt..................................
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