GenomeNet

Database: Pfam
Entry: DUF1922
LinkDB: DUF1922
Original site: DUF1922 
#=GF ID   DUF1922
#=GF AC   PF09082.5
#=GF DE   Domain of unknown function (DUF1922)
#=GF AU   Sammut SJ
#=GF SE   pdb_1gh9
#=GF GA   20.70 20.70;
#=GF TC   21.80 21.10;
#=GF NC   20.40 20.30;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 23193494 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Domain
#=GF WK   Domain_of_unknown_function
#=GF RN   [1]
#=GF RM   11017201
#=GF RT   Structural proteomics of an archaeon. 
#=GF RA   Christendat D, Yee A, Dharamsi A, Kluger Y, Savchenko A, Cort
#=GF RA   JR, Booth V, Mackereth CD, Saridakis V, Ekiel I, Kozlov G,
#=GF RA   Maxwell KL, Wu N, McIntosh LP, Gehring K, Kennedy MA, Davidson
#=GF RA   AR, Pai EF, Gerstein M, Edwards AM, Arrowsmith CH; 
#=GF RL   Nat Struct Biol 2000;7:903-909.
#=GF DR   INTERPRO; IPR015166;
#=GF DR   SCOP; 1gh9; fa;
#=GF CC   Members of this family consist of a beta-sheet region followed
#=GF CC   by an alpha-helix and an unstructured C-terminus. The beta-sheet
#=GF CC   region contains a CXCX...XCXC sequence with Cys residues located
#=GF CC   in two proximal loops and pointing towards each other. This
#=GF CC   precise function of this set of bacterial proteins is, as yet,
#=GF CC   unknown [1].
#=GF SQ   19
#=GS D2ZPK4_METSM/7-74  AC D2ZPK4.1
#=GS E3GWV7_METFV/2-71  AC E3GWV7.1
#=GS F0T8Q0_METSL/2-69  AC F0T8Q0.1
#=GS H1Z128_9EURY/2-65  AC H1Z128.1
#=GS G7WKM8_METH6/2-69  AC G7WKM8.1
#=GS D7EA10_METEZ/7-75  AC D7EA10.1
#=GS D9PY42_METTM/2-69  AC D9PY42.1
#=GS D3E077_METRM/2-69  AC D3E077.1
#=GS F0QVK3_VULM7/2-57  AC F0QVK3.1
#=GS A5UM02_METS3/7-74  AC A5UM02.1
#=GS F4BW42_METCG/1-65  AC F4BW42.1
#=GS F6D2E8_METSW/2-69  AC F6D2E8.1
#=GS Q2NI59_METST/3-70  AC Q2NI59.1
#=GS E1QQM3_VULDI/2-61  AC E1QQM3.1
#=GS F2KNB2_ARCVS/2-64  AC F2KNB2.1
#=GS B9AF12_METSM/7-74  AC B9AF12.1
#=GS PA84_METTH/2-71    AC O27252.1
#=GS PA84_METTH/2-71    DR PDB; 1GH9 A; 2-71;
#=GS Q12UN9_METBU/9-76  AC Q12UN9.1
#=GS A2ST71_METLZ/8-73  AC A2ST71.1
D2ZPK4_METSM/7-74             ..............YFIFRC.D.CGRVLYAKEGVATRKC.VCGKTIKVKQRRIFKKVETREEASLAVQEMQDEIYGNTDFKRASE........
E3GWV7_METFV/2-71             ..............YLIFRC.D.CGRALYVHESNSVKRC.VCGRLIKVKSRRILGKVNSFEEASEIVRKLQEEKYGKAVLMTA--dkyg....
F0T8Q0_METSL/2-69             ..............YIVFRC.D.CGRAVYSKQGTATKKC.VCGKTLKVKERRILAMTEEAEQASDKVRELQEEKYGGAIFTTAD-k.......
H1Z128_9EURY/2-65             ..............YLIIRCpG.CQAFSYADRYQKYKLCpDCGYTMNIKSCPVYLDVKTFPQAEAIVKELE--------------aylhkrnk
G7WKM8_METH6/2-69             ..............YLIFRC.SgCGRHLYAEEGSATRTC.PCGKRIKLGQVKVLSRARDEREAGDLVRALQVEGRGMTGFSP---ag......
D7EA10_METEZ/7-75             ivctkcrqhaqiie------.-.-------NDNKKTTKCqNCGSTLNVDKLRFFYQCDNLDDAVSARTKVQSQIQGQEQIQ----disk....
D9PY42_METTM/2-69             ..............YVIFRC.D.CGRALYSKEGADTRKC.VCGRTLKVKTRRIFGKAGSFQEAAEIVRKLQEERYGTCHFTNP--vk......
D3E077_METRM/2-69             ..............YVIFRC.D.CGRVLYAKQGVKTRKC.TCGKTIKVKSRRILQKVETANDASLAVQKMQEEIYGGTAFKTADE........
F0QVK3_VULM7/2-57             ...........acp------.K.CGNYSITRDTTKTHQCpYCGYVMRIEEVTIIARAKNGKEAREIILKLK--------------tpke....
A5UM02_METS3/7-74             ..............YFIFRC.D.CGRVLYAKEGVATRKC.VCGKTIKVKQRRIFKKVETREEASLAVQEMQDEIYGNTDFKRASE........
F4BW42_METCG/1-65             ..............--MFRC.S.CGRHLYSPDDAKTRTC.PCGKRTALSRVRILATAPDARAAGEIVRRLQLGDSGLTGFSQA--k.......
F6D2E8_METSW/2-69             ..............YLIFRC.D.CGRTMYSKEEVARKKC.VCGKNLKVKERRILAKTDNAESASQMVRKFQEEKYGGLQFTTAD-r.......
Q2NI59_METST/3-70             ..............YLIYRC.D.CGRVLYSKETTKTKKC.TCGKTLNVKKRRILKIAQSSTQATETVQQMQEEIYGGSIFRTANE........
E1QQM3_VULDI/2-61             ..............YLIIACpR.CGNYSVVRDTAKTHQCpYCGYVMRIEEASIIARAKNGKEARELILKLK--------------tpre....
F2KNB2_ARCVS/2-64             ..............FVVFRCrK.CGRYLYAKESTKTKMC.VCGCRNNLKRVRKLARAETELEAGEIVRRLQG-------------sgtefds.
B9AF12_METSM/7-74             ..............YFIFRC.D.CGRVLYAKEGVATRKC.VCGKTIKVKQRRIFKKVETREEASLAVQEMQDEIYGNTDFKRASE........
PA84_METTH/2-71               ..............YIIFRC.D.CGRALYSREGAKTRKC.VCGRTVNVKDRRIFGRADDFEEASELVRKLQEEKYGSCHFTNPS-kre.....
#=GR PA84_METTH/2-71    SS    ..............EEEEEE.T.TS--EEEETT-SEEEE.TTTEEEE--SSS-BS--SSHHHHHHHHHHHSS---S-TTSS-TT-S--.....
Q12UN9_METBU/9-76             ..acpkcrksaqli------.-.------EDKDAKTTKCqLCGTNLHIRKLRVFHTGEDIEEARAVRTKVQAQLLGEKQSTT---msn.....
A2ST71_METLZ/8-73             ........svigcm------.K.CRRRIVADLSYATKTC.ICGNKIDLTQTKLLAVCESADEAGELLRRMQTAK--NSGFTSA--nk......
#=GC SS_cons                  ..............EEEEEE.T.TS--EEEETT-SEEEE.TTTEEEE--SSS-BS--SSHHHHHHHHHHHSS---S-TTSS-TT-S--.....
#=GC seq_cons                 ..............YhIFRC.c.CGRhlYu+-sspT++C.sCG+sl+lKppRIht+scstcEAuphVp+lQpphhGtstFpps..t.......
//
DBGET integrated database retrieval system